RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 JCADQ9P266 1359 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 PTGS1P23219 599 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 KRT32Q14532 448 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 ATL3Q6DD88 541 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 ZSCAN25Q6NSZ9 544 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 PRPF40BQ6NWY9 871 aaKnown RBP16.95■□□□□ 0.3
NR1H3-220ENST00000481020 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 MRFAP1L1Q96HT8 127 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 ZSCAN16Q9H4T2 348 aaPredicted RBP16.95■□□□□ 0.3
NR1H3-220ENST00000481020 CBX8Q9HC52 389 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 UBR1Q8IWV7 1749 aa16.95■□□□□ 0.3
NR1H3-220ENST00000481020 SLIT1O75093 1534 aa16.94■□□□□ 0.3
NR1H3-220ENST00000481020 ANKARQ7Z5J8 1434 aa16.94■□□□□ 0.3
NR1H3-220ENST00000481020 NCBP1Q09161 790 aaKnown RBP16.94■□□□□ 0.3
NR1H3-220ENST00000481020 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
NR1H3-220ENST00000481020 CCDC112Q8NEF3 446 aa16.94■□□□□ 0.3
NR1H3-220ENST00000481020 SPATA32Q96LK8 384 aa16.94■□□□□ 0.3
NR1H3-220ENST00000481020 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
NR1H3-220ENST00000481020 TUBB4AP04350 444 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 IFIT2P09913 472 aaKnown RBP16.93■□□□□ 0.3
NR1H3-220ENST00000481020 RBM6P78332 1123 aaKnown RBP16.93■□□□□ 0.3
NR1H3-220ENST00000481020 ST3GAL1Q11201 340 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 CCDC186Q7Z3E2 898 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 SPC24Q8NBT2 197 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 CFAP45Q9UL16 551 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 RBM8AQ9Y5S9 174 aaKnown RBP16.93■□□□□ 0.3
NR1H3-220ENST00000481020 OVOS2A0A0G2JMS6 1433 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 PTH1RQ03431 593 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 OS9Q13438 667 aaPredicted RBP16.93■□□□□ 0.3
NR1H3-220ENST00000481020 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 SLFNL1Q499Z3 407 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 ANO6Q4KMQ2 910 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 BLOC1S2Q6QNY1 142 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 TICAM2Q86XR7 235 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 LEO1Q8WVC0 666 aaPredicted RBP16.93■□□□□ 0.3
NR1H3-220ENST00000481020 TSC1Q92574 1164 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 CHMP4CQ96CF2 233 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 TRIM5Q9C035 493 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 DACT1Q9NYF0 836 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 CTNNA3Q9UI47 895 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 TPCN1Q9ULQ1 816 aa16.93■□□□□ 0.3
NR1H3-220ENST00000481020 MAP4K4O95819 1239 aaPredicted RBP16.92■□□□□ 0.3
NR1H3-220ENST00000481020 TNNT1P13805 278 aa16.92■□□□□ 0.3
NR1H3-220ENST00000481020 RPS6KB1P23443 525 aa16.92■□□□□ 0.3
NR1H3-220ENST00000481020 ZNF165P49910 485 aa16.92■□□□□ 0.3
NR1H3-220ENST00000481020 DRC7Q8IY82 874 aa16.92■□□□□ 0.3
NR1H3-220ENST00000481020 MPNDQ8N594 471 aa16.92■□□□□ 0.3
NR1H3-220ENST00000481020 DDX41Q9UJV9 622 aaKnown RBP16.92■□□□□ 0.3
NR1H3-220ENST00000481020 MORC2Q9Y6X9 1032 aaPredicted RBP16.92■□□□□ 0.3
NR1H3-220ENST00000481020 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
NR1H3-220ENST00000481020 LIG1P18858 919 aa16.91■□□□□ 0.3
NR1H3-220ENST00000481020 LUZP1Q86V48 1076 aa16.91■□□□□ 0.3
NR1H3-220ENST00000481020 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
NR1H3-220ENST00000481020 KDM3BQ7LBC6 1761 aa16.9■□□□□ 0.3
NR1H3-220ENST00000481020 SLC27A2O14975 620 aa16.9■□□□□ 0.3
NR1H3-220ENST00000481020 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
NR1H3-220ENST00000481020 HOXC9P31274 260 aa16.9■□□□□ 0.3
NR1H3-220ENST00000481020 KCNJ4P48050 445 aa16.9■□□□□ 0.3
NR1H3-220ENST00000481020 EIF4A1P60842 406 aaKnown RBP16.9■□□□□ 0.3
NR1H3-220ENST00000481020 CDC37L1Q7L3B6 337 aa16.9■□□□□ 0.3
NR1H3-220ENST00000481020 ARID3AQ99856 593 aa16.9■□□□□ 0.3
NR1H3-220ENST00000481020 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
NR1H3-220ENST00000481020 LLPHQ9BRT6 129 aaKnown RBP16.9■□□□□ 0.3
NR1H3-220ENST00000481020 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
NR1H3-220ENST00000481020 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
NR1H3-220ENST00000481020 MED23Q9ULK4 1368 aa16.89■□□□□ 0.3
NR1H3-220ENST00000481020 UTYO14607 1347 aa16.89■□□□□ 0.29
NR1H3-220ENST00000481020 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
NR1H3-220ENST00000481020 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-220ENST00000481020 ZHX1Q9UKY1 873 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-220ENST00000481020 U2AF2P26368 475 aaKnown RBP eCLIP16.88■□□□□ 0.29
NR1H3-220ENST00000481020 GSDMDP57764 484 aa16.88■□□□□ 0.29
NR1H3-220ENST00000481020 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
NR1H3-220ENST00000481020 ZNF397Q8NF99 534 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-220ENST00000481020 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-220ENST00000481020 MRC1P22897 1456 aa16.88■□□□□ 0.29
NR1H3-220ENST00000481020 LMTK3Q96Q04 1460 aa16.88■□□□□ 0.29
NR1H3-220ENST00000481020 NPHP4O75161 1426 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-220ENST00000481020 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 KCNJ6P48051 423 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 STX1AQ16623 288 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 TPD52L1Q16890 204 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-220ENST00000481020 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 ADCY9O60503 1353 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 CPA1P15085 419 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 NYAP1Q6ZVC0 841 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 LRRC8AQ8IWT6 810 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 ERO1AQ96HE7 468 aa16.87■□□□□ 0.29
NR1H3-220ENST00000481020 C16orf45Q96MC5 204 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-220ENST00000481020 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-220ENST00000481020 NECAB1Q8N987 351 aa16.86■□□□□ 0.29
NR1H3-220ENST00000481020 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
NR1H3-220ENST00000481020 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
NR1H3-220ENST00000481020 IMPACTQ9P2X3 320 aa16.86■□□□□ 0.29
NR1H3-220ENST00000481020 RESTQ13127 1097 aa16.85■□□□□ 0.29
NR1H3-220ENST00000481020 IQCB1Q15051 598 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms