RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
ATG4B-219ENST00000479941 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
ATG4B-219ENST00000479941 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
ATG4B-219ENST00000479941 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
ATG4B-219ENST00000479941 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
ATG4B-219ENST00000479941 PTPRCP08575 1304 aa13.8□□□□□ -0.2
ATG4B-219ENST00000479941 KLRG2A4D1S0 409 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-219ENST00000479941 KCNA3P22001 575 aa13.79□□□□□ -0.2
ATG4B-219ENST00000479941 CHRNA5P30532 468 aa13.79□□□□□ -0.2
ATG4B-219ENST00000479941 RARSP54136 660 aaKnown RBP13.79□□□□□ -0.2
ATG4B-219ENST00000479941 BRPF1P55201 1214 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-219ENST00000479941 SLC10A5Q5PT55 438 aa13.79□□□□□ -0.2
ATG4B-219ENST00000479941 C2CD5Q86YS7 1000 aa13.79□□□□□ -0.2
ATG4B-219ENST00000479941 PIM2Q9P1W9 311 aa13.79□□□□□ -0.2
ATG4B-219ENST00000479941 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
ATG4B-219ENST00000479941 RIC1Q4ADV7 1423 aa13.79□□□□□ -0.2
ATG4B-219ENST00000479941 GPR162Q16538 588 aa13.78□□□□□ -0.2
ATG4B-219ENST00000479941 BCL2L13Q9BXK5 485 aa13.78□□□□□ -0.2
ATG4B-219ENST00000479941 CWC25Q9NXE8 425 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-219ENST00000479941 KIAA1551Q9HCM1 1747 aa13.78□□□□□ -0.2
ATG4B-219ENST00000479941 IGKV5-2P06315 115 aa13.77□□□□□ -0.21
ATG4B-219ENST00000479941 SRGNP10124 158 aa13.77□□□□□ -0.21
ATG4B-219ENST00000479941 ZBTB38Q8NAP3 1195 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-219ENST00000479941 LINS1Q8NG48 757 aa13.77□□□□□ -0.21
ATG4B-219ENST00000479941 MASTLQ96GX5 879 aa13.77□□□□□ -0.21
ATG4B-219ENST00000479941 ABCC12Q96J65 1359 aa13.77□□□□□ -0.21
ATG4B-219ENST00000479941 NLRP3Q96P20 1036 aa13.77□□□□□ -0.21
ATG4B-219ENST00000479941 ANKRD31Q8N7Z5 1873 aa13.76□□□□□ -0.21
ATG4B-219ENST00000479941 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-219ENST00000479941 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
ATG4B-219ENST00000479941 F6X3S4 739 aa13.76□□□□□ -0.21
ATG4B-219ENST00000479941 GRIN3BO60391 1043 aa13.76□□□□□ -0.21
ATG4B-219ENST00000479941 PCCAP05165 728 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-219ENST00000479941 HSP90B1P14625 803 aaKnown RBP13.76□□□□□ -0.21
ATG4B-219ENST00000479941 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
ATG4B-219ENST00000479941 DALRD3Q5D0E6 543 aaKnown RBP13.76□□□□□ -0.21
ATG4B-219ENST00000479941 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
ATG4B-219ENST00000479941 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
ATG4B-219ENST00000479941 KIF16BQ96L93 1317 aa13.75□□□□□ -0.21
ATG4B-219ENST00000479941 NPR1P16066 1061 aa13.75□□□□□ -0.21
ATG4B-219ENST00000479941 CRY2Q49AN0 593 aa13.75□□□□□ -0.21
ATG4B-219ENST00000479941 BEND3Q5T5X7 828 aa13.75□□□□□ -0.21
ATG4B-219ENST00000479941 STYK1Q6J9G0 422 aa13.75□□□□□ -0.21
ATG4B-219ENST00000479941 TTLL6Q8N841 843 aa13.75□□□□□ -0.21
ATG4B-219ENST00000479941 CNKSR1Q969H4 720 aa13.75□□□□□ -0.21
ATG4B-219ENST00000479941 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
ATG4B-219ENST00000479941 BCS1LQ9Y276 419 aa13.75□□□□□ -0.21
ATG4B-219ENST00000479941 HCLS1P14317 486 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-219ENST00000479941 YBX3P16989 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
ATG4B-219ENST00000479941 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
ATG4B-219ENST00000479941 GCKRQ14397 625 aa13.74□□□□□ -0.21
ATG4B-219ENST00000479941 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
ATG4B-219ENST00000479941 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
ATG4B-219ENST00000479941 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
ATG4B-219ENST00000479941 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
ATG4B-219ENST00000479941 API5Q9BZZ5 524 aaKnown RBP13.74□□□□□ -0.21
ATG4B-219ENST00000479941 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
ATG4B-219ENST00000479941 NOB1Q9ULX3 412 aaKnown RBP13.74□□□□□ -0.21
ATG4B-219ENST00000479941 CDHR2Q9BYE9 1310 aa13.73□□□□□ -0.21
ATG4B-219ENST00000479941 IRS4O14654 1257 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-219ENST00000479941 ALDH1L1O75891 902 aa13.73□□□□□ -0.21
ATG4B-219ENST00000479941 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-219ENST00000479941 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-219ENST00000479941 RPGRQ92834 1020 aaKnown RBP13.73□□□□□ -0.21
ATG4B-219ENST00000479941 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
ATG4B-219ENST00000479941 BRCA1P38398 1863 aaKnown RBP13.73□□□□□ -0.21
ATG4B-219ENST00000479941 DLEC1Q9Y238 1755 aa13.73□□□□□ -0.21
ATG4B-219ENST00000479941 H7C1W4 665 aa13.72□□□□□ -0.21
ATG4B-219ENST00000479941 IPO8O15397 1037 aaKnown RBP13.72□□□□□ -0.21
ATG4B-219ENST00000479941 BCAR3O75815 825 aa13.72□□□□□ -0.21
ATG4B-219ENST00000479941 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
ATG4B-219ENST00000479941 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
ATG4B-219ENST00000479941 COL11A2P13942 1736 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-219ENST00000479941 PDE8AO60658 829 aa13.71□□□□□ -0.21
ATG4B-219ENST00000479941 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
ATG4B-219ENST00000479941 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.21
ATG4B-219ENST00000479941 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
ATG4B-219ENST00000479941 PRPF40BQ6NWY9 871 aaKnown RBP13.7□□□□□ -0.22
ATG4B-219ENST00000479941 UBE3BQ7Z3V4 1068 aa13.7□□□□□ -0.22
ATG4B-219ENST00000479941 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-219ENST00000479941 GRM8O00222 908 aa13.69□□□□□ -0.22
ATG4B-219ENST00000479941 CCT4P50991 539 aaKnown RBP13.69□□□□□ -0.22
ATG4B-219ENST00000479941 CASP7P55210 303 aa13.69□□□□□ -0.22
ATG4B-219ENST00000479941 ATF7IPQ6VMQ6 1270 aa13.69□□□□□ -0.22
ATG4B-219ENST00000479941 DDX46Q7L014 1031 aaKnown RBP13.69□□□□□ -0.22
ATG4B-219ENST00000479941 JARID2Q92833 1246 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-219ENST00000479941 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
ATG4B-219ENST00000479941 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-219ENST00000479941 ARFGEF1Q9Y6D6 1849 aa13.69□□□□□ -0.22
ATG4B-219ENST00000479941 DDX60Q8IY21 1712 aaKnown RBP13.68□□□□□ -0.22
ATG4B-219ENST00000479941 CCDC152Q4G0S7 254 aa13.68□□□□□ -0.22
ATG4B-219ENST00000479941 SOGA3Q5TF21 947 aa13.68□□□□□ -0.22
ATG4B-219ENST00000479941 ZKSCAN2Q63HK3 967 aa13.68□□□□□ -0.22
ATG4B-219ENST00000479941 LAMB2P55268 1798 aa13.68□□□□□ -0.22
ATG4B-219ENST00000479941 ABCC4O15439 1325 aa13.67□□□□□ -0.22
ATG4B-219ENST00000479941 C21orf2O43822 256 aa13.67□□□□□ -0.22
ATG4B-219ENST00000479941 BBOX1O75936 387 aa13.67□□□□□ -0.22
ATG4B-219ENST00000479941 TRIM27P14373 513 aa13.67□□□□□ -0.22
ATG4B-219ENST00000479941 ARHGAP27Q6ZUM4 889 aa13.67□□□□□ -0.22
ATG4B-219ENST00000479941 C7orf43Q8WVR3 580 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms