RNA–Protein interactions for RNA: ENST00000479257.5

CALU-203, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 2,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-203ENST00000479257 PFDN2Q9UHV9 154 aa8.35□□□□□ -1.07
CALU-203ENST00000479257 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
CALU-203ENST00000479257 SH3PXD2AQ5TCZ1 1133 aa8.34□□□□□ -1.07
CALU-203ENST00000479257 SOGA3Q5TF21 947 aa8.34□□□□□ -1.07
CALU-203ENST00000479257 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
CALU-203ENST00000479257 CFAP69A5D8W1 941 aa8.34□□□□□ -1.07
CALU-203ENST00000479257 IRS4O14654 1257 aaPredicted RBP8.34□□□□□ -1.07
CALU-203ENST00000479257 SLC4A10Q6U841 1118 aa8.34□□□□□ -1.07
CALU-203ENST00000479257 DDX42Q86XP3 938 aaKnown RBP eCLIP8.34□□□□□ -1.07
CALU-203ENST00000479257 MINDY4BA8MYZ0 360 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 NBPF26B4DH59 902 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 EIF1AYO14602 144 aaKnown RBP8.33□□□□□ -1.08
CALU-203ENST00000479257 CBX2Q14781 532 aaPredicted RBP8.33□□□□□ -1.08
CALU-203ENST00000479257 MAP7D1Q3KQU3 841 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 SPATC1Q76KD6 591 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 APPBP2Q92624 585 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 NEUROD6Q96NK8 337 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 CCDC8Q9H0W5 538 aaPredicted RBP8.33□□□□□ -1.08
CALU-203ENST00000479257 ZNF358Q9NW07 568 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 ZIM2Q9NZV7 527 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 TOP2AP11388 1531 aaKnown RBP8.33□□□□□ -1.08
CALU-203ENST00000479257 TRIM6-TRIM34B2RNG4 842 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 TMEM229AB2RXF0 380 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 DIAPH1O60610 1272 aaKnown RBP8.33□□□□□ -1.08
CALU-203ENST00000479257 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
CALU-203ENST00000479257 TRIM37O94972 964 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 CNGA1P29973 690 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 SAFB2Q14151 953 aaKnown RBP eCLIP8.33□□□□□ -1.08
CALU-203ENST00000479257 C16orf46Q6P387 395 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 ETFBKMTQ8IXQ9 262 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 DMRTB1Q96MA1 342 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 PPT2Q9UMR5 302 aa8.33□□□□□ -1.08
CALU-203ENST00000479257 PTPN12Q05209 780 aaKnown RBP8.32□□□□□ -1.08
CALU-203ENST00000479257 MCL1Q07820 350 aa8.32□□□□□ -1.08
CALU-203ENST00000479257 PIP4P2Q8N4L2 257 aa8.32□□□□□ -1.08
CALU-203ENST00000479257 TIFAQ96CG3 184 aa8.32□□□□□ -1.08
CALU-203ENST00000479257 RBM19Q9Y4C8 960 aaKnown RBP8.32□□□□□ -1.08
CALU-203ENST00000479257 COMMD10Q9Y6G5 202 aa8.32□□□□□ -1.08
CALU-203ENST00000479257 FAM163BP0C2L3 166 aa8.32□□□□□ -1.08
CALU-203ENST00000479257 PPP2R5AQ15172 486 aa8.32□□□□□ -1.08
CALU-203ENST00000479257 KSR2Q6VAB6 950 aa8.32□□□□□ -1.08
CALU-203ENST00000479257 APBA2Q99767 749 aa8.32□□□□□ -1.08
CALU-203ENST00000479257 KANK3Q6NY19 840 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 EAF1Q96JC9 268 aaPredicted RBP8.31□□□□□ -1.08
CALU-203ENST00000479257 SPON2Q9BUD6 331 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 DYTNA2CJ06 578 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 WASLO00401 505 aaPredicted RBP8.31□□□□□ -1.08
CALU-203ENST00000479257 FBXO24O75426 580 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 TRAPPC10P48553 1259 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 EXOSC10Q01780 885 aaKnown RBP8.31□□□□□ -1.08
CALU-203ENST00000479257 LHFPL2Q6ZUX7 228 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 UBP1Q9NZI7 540 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 TAGLN3Q9UI15 199 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 PRKAB1Q9Y478 270 aa8.31□□□□□ -1.08
CALU-203ENST00000479257 POTEFA5A3E0 1075 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 FOSP01100 380 aaPredicted RBP8.3□□□□□ -1.08
CALU-203ENST00000479257 CRKP46108 304 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 ARSIQ5FYB1 569 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 ERMP1Q7Z2K6 904 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 ALKBH8Q96BT7 664 aaKnown RBP8.3□□□□□ -1.08
CALU-203ENST00000479257 CENPOQ9BU64 300 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 AVENQ9NQS1 362 aaPredicted RBP8.3□□□□□ -1.08
CALU-203ENST00000479257 USP3Q9Y6I4 520 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 NRDCO43847 1150 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 VIL1P09327 827 aaKnown RBP8.3□□□□□ -1.08
CALU-203ENST00000479257 ATF3P18847 181 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 STIM2Q9P246 746 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 DAAM1Q9Y4D1 1078 aa8.3□□□□□ -1.08
CALU-203ENST00000479257 ASMTLO95671 621 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 CDC27P30260 824 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 VPS37AQ8NEZ2 397 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 PRDM9Q9NQV7 894 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 TMEM260Q9NX78 707 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 EPB41L2O43491 1005 aaKnown RBP8.29□□□□□ -1.08
CALU-203ENST00000479257 NR1I2O75469 434 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 NOS2P35228 1153 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 FAM160A1Q05DH4 1040 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 NFX1Q12986 1120 aaKnown RBP8.29□□□□□ -1.08
CALU-203ENST00000479257 GJD3Q8N144 294 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 FRMD6Q96NE9 622 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 SLKQ9H2G2 1235 aaPredicted RBP8.29□□□□□ -1.08
CALU-203ENST00000479257 SERTAD1Q9UHV2 236 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
CALU-203ENST00000479257 MORN1Q5T089 497 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 RASGRP4Q8TDF6 673 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 AS3MTQ9HBK9 375 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 PCDHB11Q9Y5F2 797 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 IFRD1O00458 451 aaPredicted RBP8.28□□□□□ -1.08
CALU-203ENST00000479257 SMAD7O15105 426 aaKnown RBP8.28□□□□□ -1.08
CALU-203ENST00000479257 CD53P19397 219 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 SIM2Q14190 667 aaPredicted RBP8.28□□□□□ -1.08
CALU-203ENST00000479257 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 SCYL1Q96KG9 808 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 GGNBP2Q9H3C7 697 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 NESP48681 1621 aa8.28□□□□□ -1.08
CALU-203ENST00000479257 B2RBV5 119 aa8.27□□□□□ -1.08
CALU-203ENST00000479257 FGAP02671 866 aa8.27□□□□□ -1.08
CALU-203ENST00000479257 PLCG2P16885 1265 aa8.27□□□□□ -1.08
CALU-203ENST00000479257 BRD3Q15059 726 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms