RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 NAA15Q9BXJ9 866 aaKnown RBP12.56□□□□□ -0.4
EWSR1-216ENST00000479135 TRIM6Q9C030 488 aaPredicted RBP12.56□□□□□ -0.4
EWSR1-216ENST00000479135 MCM2P49736 904 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 VPS36Q86VN1 386 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 H0YC42 278 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 HDGFP51858 240 aaKnown RBP12.56□□□□□ -0.4
EWSR1-216ENST00000479135 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
EWSR1-216ENST00000479135 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
EWSR1-216ENST00000479135 BIRC2Q13490 618 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
EWSR1-216ENST00000479135 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.56□□□□□ -0.44e-8■■□□□ 12.1
EWSR1-216ENST00000479135 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 GOLGA8BA8MQT2 603 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 LACTBP83111 547 aaPredicted RBP12.56□□□□□ -0.4
EWSR1-216ENST00000479135 CDC45O75419 566 aa12.55□□□□□ -0.4
EWSR1-216ENST00000479135 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
EWSR1-216ENST00000479135 SF3B3Q15393 1217 aaKnown RBP12.55□□□□□ -0.4
EWSR1-216ENST00000479135 FERMT3Q86UX7 667 aa12.55□□□□□ -0.4
EWSR1-216ENST00000479135 ALS2CR12Q96Q35 445 aa12.55□□□□□ -0.4
EWSR1-216ENST00000479135 FAF1Q9UNN5 650 aaPredicted RBP12.55□□□□□ -0.4
EWSR1-216ENST00000479135 NBPF11Q86T75 865 aa12.55□□□□□ -0.4
EWSR1-216ENST00000479135 BZW2Q9Y6E2 419 aaKnown RBP12.55□□□□□ -0.4
EWSR1-216ENST00000479135 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
EWSR1-216ENST00000479135 LRRC23Q53EV4 343 aaPredicted RBP12.55□□□□□ -0.4
EWSR1-216ENST00000479135 LMNTD2Q8IXW0 634 aa12.55□□□□□ -0.4
EWSR1-216ENST00000479135 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
EWSR1-216ENST00000479135 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.55□□□□□ -0.4
EWSR1-216ENST00000479135 HPDP32754 393 aaPredicted RBP12.55□□□□□ -0.4
EWSR1-216ENST00000479135 MTIF2P46199 727 aaKnown RBP12.55□□□□□ -0.4
EWSR1-216ENST00000479135 VTI1AQ96AJ9 217 aa12.55□□□□□ -0.4
EWSR1-216ENST00000479135 SESN3P58005 492 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 KRT10P13645 584 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
EWSR1-216ENST00000479135 PDZD8Q8NEN9 1154 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 HMOX1P09601 288 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 PDCD2Q16342 344 aaPredicted RBP12.54□□□□□ -0.4
EWSR1-216ENST00000479135 BICD1Q96G01 975 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
EWSR1-216ENST00000479135 FERMT1Q9BQL6 677 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 TXNDC16Q9P2K2 825 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 DYTNA2CJ06 578 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 OPA1O60313 960 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 CACNA2D3Q8IZS8 1091 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 KRT85P78386 507 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 FAM169AQ9Y6X4 670 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 SMARCA2P51531 1590 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 SERPINI2O75830 405 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 SPDL1Q96EA4 605 aa12.54□□□□□ -0.4
EWSR1-216ENST00000479135 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
EWSR1-216ENST00000479135 GABPAQ06546 454 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 MVPQ14764 893 aaKnown RBP12.53□□□□□ -0.4
EWSR1-216ENST00000479135 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
EWSR1-216ENST00000479135 TSPYL4Q9UJ04 414 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 SATB2Q9UPW6 733 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 GBP1P32455 592 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 HP1BP3Q5SSJ5 553 aaPredicted RBP12.53□□□□□ -0.4
EWSR1-216ENST00000479135 UBLCP1Q8WVY7 318 aaPredicted RBP12.53□□□□□ -0.4
EWSR1-216ENST00000479135 PHEXP78562 749 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 SURF6O75683 361 aaKnown RBP12.53□□□□□ -0.4
EWSR1-216ENST00000479135 APOEP02649 317 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 TSPY3P0CV98 308 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 TSPY8P0CW00 308 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 TSPY1Q01534 308 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 PALMDQ9NP74 551 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
EWSR1-216ENST00000479135 SCHIP1Q9P0W5 487 aaPredicted RBP12.52□□□□□ -0.4
EWSR1-216ENST00000479135 CUX2O14529 1486 aa12.52□□□□□ -0.4
EWSR1-216ENST00000479135 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.52□□□□□ -0.4
EWSR1-216ENST00000479135 GBP5Q96PP8 586 aa12.52□□□□□ -0.4
EWSR1-216ENST00000479135 DDX21Q9NR30 783 aaKnown RBP eCLIP12.52□□□□□ -0.4
EWSR1-216ENST00000479135 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
EWSR1-216ENST00000479135 TMTC4Q5T4D3 741 aa12.52□□□□□ -0.41
EWSR1-216ENST00000479135 METTL14Q9HCE5 456 aaKnown RBP12.52□□□□□ -0.41
EWSR1-216ENST00000479135 KIF2AO00139 706 aaPredicted RBP12.52□□□□□ -0.41
EWSR1-216ENST00000479135 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.41
EWSR1-216ENST00000479135 LONP1P36776 959 aaKnown RBP12.52□□□□□ -0.41
EWSR1-216ENST00000479135 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.41
EWSR1-216ENST00000479135 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
EWSR1-216ENST00000479135 PALM3A6NDB9 673 aaPredicted RBP12.52□□□□□ -0.41
EWSR1-216ENST00000479135 PDE6BP35913 854 aa12.52□□□□□ -0.41
EWSR1-216ENST00000479135 NFKBIL1Q9UBC1 381 aaPredicted RBP12.52□□□□□ -0.41
EWSR1-216ENST00000479135 CCDC196A0A1B0GTZ2 297 aa12.52□□□□□ -0.41
EWSR1-216ENST00000479135 SMARCC2Q8TAQ2 1214 aa12.52□□□□□ -0.41
EWSR1-216ENST00000479135 BAG2O95816 211 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 CCDC40Q4G0X9 1142 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 CHMP6Q96FZ7 201 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 SAMM50Q9Y512 469 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 HNRNPCL2B2RXH8 293 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
EWSR1-216ENST00000479135 CYP46A1Q9Y6A2 500 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 YEATS4O95619 227 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 ZSCAN32Q9NX65 697 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 GNG11P61952 73 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms