RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ISCA1Q9BUE6 129 aa34.21■■■■□ 3.07
CCM2-211ENST00000478582 IBTKQ9P2D0 1353 aaPredicted RBP34.21■■■■□ 3.07
CCM2-211ENST00000478582 TRIM28Q13263 835 aaKnown RBP34.2■■■■□ 3.07
CCM2-211ENST00000478582 TPTE2Q6XPS3 522 aa34.2■■■■□ 3.07
CCM2-211ENST00000478582 METTL22Q9BUU2 404 aaPredicted RBP34.2■■■■□ 3.07
CCM2-211ENST00000478582 ARFGEF2Q9Y6D5 1785 aa34.2■■■■□ 3.07
CCM2-211ENST00000478582 ANKRD36CQ5JPF3 1778 aa34.19■■■■□ 3.06
CCM2-211ENST00000478582 NYXQ9GZU5 481 aa34.19■■■■□ 3.06
CCM2-211ENST00000478582 MAP3K2Q9Y2U5 619 aa34.19■■■■□ 3.06
CCM2-211ENST00000478582 FKBP5Q13451 457 aaPredicted RBP34.18■■■■□ 3.06
CCM2-211ENST00000478582 SUSD4Q5VX71 490 aa34.18■■■■□ 3.06
CCM2-211ENST00000478582 NLRP10Q86W26 655 aa34.18■■■■□ 3.06
CCM2-211ENST00000478582 RARSP54136 660 aaKnown RBP34.17■■■■□ 3.06
CCM2-211ENST00000478582 BRPF1P55201 1214 aaPredicted RBP34.17■■■■□ 3.06
CCM2-211ENST00000478582 PPP1R42Q7Z4L9 355 aa34.17■■■■□ 3.06
CCM2-211ENST00000478582 ZNF622Q969S3 477 aaKnown RBP eCLIP34.16■■■■□ 3.06
CCM2-211ENST00000478582 SMC4Q9NTJ3 1288 aa34.15■■■■□ 3.06
CCM2-211ENST00000478582 FAM177BA6PVY3 158 aa34.14■■■■□ 3.06
CCM2-211ENST00000478582 NTSR2O95665 410 aa34.14■■■■□ 3.06
CCM2-211ENST00000478582 MYD88Q99836 296 aa34.14■■■■□ 3.06
CCM2-211ENST00000478582 RNF123Q5XPI4 1314 aa34.13■■■■□ 3.05
CCM2-211ENST00000478582 ATP5J2-PTCD1G3V325 749 aa34.13■■■■□ 3.05
CCM2-211ENST00000478582 SRGNP10124 158 aa34.13■■■■□ 3.05
CCM2-211ENST00000478582 DNAAF4Q8WXU2 420 aa34.13■■■■□ 3.05
CCM2-211ENST00000478582 UTP14AQ9BVJ6 771 aaKnown RBP34.13■■■■□ 3.05
CCM2-211ENST00000478582 BCL2L13Q9BXK5 485 aa34.13■■■■□ 3.05
CCM2-211ENST00000478582 PTPRCP08575 1304 aa34.12■■■■□ 3.05
CCM2-211ENST00000478582 COL11A2P13942 1736 aaPredicted RBP34.12■■■■□ 3.05
CCM2-211ENST00000478582 STYK1Q6J9G0 422 aa34.11■■■■□ 3.05
CCM2-211ENST00000478582 KLRG2A4D1S0 409 aaPredicted RBP34.1■■■■□ 3.05
CCM2-211ENST00000478582 GTF2E1P29083 439 aaPredicted RBP34.1■■■■□ 3.05
CCM2-211ENST00000478582 NEXNQ0ZGT2 675 aa34.1■■■■□ 3.05
CCM2-211ENST00000478582 CCDC191Q8NCU4 936 aa34.1■■■■□ 3.05
CCM2-211ENST00000478582 MASTLQ96GX5 879 aa34.1■■■■□ 3.05
CCM2-211ENST00000478582 GPBP1L1Q9HC44 474 aaPredicted RBP34.1■■■■□ 3.05
CCM2-211ENST00000478582 C9orf131Q5VYM1 1079 aa34.09■■■■□ 3.05
CCM2-211ENST00000478582 CNKSR1Q969H4 720 aa34.09■■■■□ 3.05
CCM2-211ENST00000478582 YTHDC1Q96MU7 727 aaKnown RBP34.09■■■■□ 3.05
CCM2-211ENST00000478582 IGKV5-2P06315 115 aa34.08■■■■□ 3.05
CCM2-211ENST00000478582 ERFEQ4G0M1 354 aa34.08■■■■□ 3.05
CCM2-211ENST00000478582 NUTM1Q86Y26 1132 aa34.08■■■■□ 3.05
CCM2-211ENST00000478582 SLC10A5Q5PT55 438 aa34.07■■■■□ 3.04
CCM2-211ENST00000478582 TRMT112Q9UI30 125 aaKnown RBP34.07■■■■□ 3.04
CCM2-211ENST00000478582 RIC1Q4ADV7 1423 aa34.06■■■■□ 3.04
CCM2-211ENST00000478582 F6X3S4 739 aa34.06■■■■□ 3.04
CCM2-211ENST00000478582 ZNF526Q8TF50 670 aaPredicted RBP34.06■■■■□ 3.04
CCM2-211ENST00000478582 SBF1O95248 1867 aa34.05■■■■□ 3.04
CCM2-211ENST00000478582 LINS1Q8NG48 757 aa34.05■■■■□ 3.04
CCM2-211ENST00000478582 CWC25Q9NXE8 425 aaPredicted RBP34.05■■■■□ 3.04
CCM2-211ENST00000478582 NEURL1BA8MQ27 555 aa34.04■■■■□ 3.04
CCM2-211ENST00000478582 NPR1P16066 1061 aa34.04■■■■□ 3.04
CCM2-211ENST00000478582 SH3TC1Q8TE82 1336 aa34.04■■■■□ 3.04
CCM2-211ENST00000478582 ABCC12Q96J65 1359 aa34.03■■■■□ 3.04
CCM2-211ENST00000478582 C21orf2O43822 256 aa34.03■■■■□ 3.04
CCM2-211ENST00000478582 BEND3Q5T5X7 828 aa34.03■■■■□ 3.04
CCM2-211ENST00000478582 RNF181Q9P0P0 153 aa34.03■■■■□ 3.04
CCM2-211ENST00000478582 NOB1Q9ULX3 412 aaKnown RBP34.03■■■■□ 3.04
CCM2-211ENST00000478582 KIF16BQ96L93 1317 aa34.03■■■■□ 3.04
CCM2-211ENST00000478582 RASSF7Q02833 373 aa34.02■■■■□ 3.04
CCM2-211ENST00000478582 CWF19L2Q2TBE0 894 aaKnown RBP34.02■■■■□ 3.04
CCM2-211ENST00000478582 ZBTB38Q8NAP3 1195 aaPredicted RBP34.02■■■■□ 3.04
CCM2-211ENST00000478582 ARHGAP45Q92619 1136 aa34.02■■■■□ 3.04
CCM2-211ENST00000478582 BCAR3O75815 825 aa34.01■■■■□ 3.03
CCM2-211ENST00000478582 PRPF40BQ6NWY9 871 aaKnown RBP34.01■■■■□ 3.03
CCM2-211ENST00000478582 ZNF219Q9P2Y4 722 aaPredicted RBP34.01■■■■□ 3.03
CCM2-211ENST00000478582 SLX4Q8IY92 1834 aa34.01■■■■□ 3.03
CCM2-211ENST00000478582 PCCAP05165 728 aaPredicted RBP34■■■■□ 3.03
CCM2-211ENST00000478582 C1QTNF8P60827 252 aa34■■■■□ 3.03
CCM2-211ENST00000478582 NFKBIEO00221 500 aa33.99■■■■□ 3.03
CCM2-211ENST00000478582 SYNE4Q8N205 404 aa33.99■■■■□ 3.03
CCM2-211ENST00000478582 FAM89AQ96GI7 184 aa33.99■■■■□ 3.03
CCM2-211ENST00000478582 LMNB1P20700 586 aa33.98■■■■□ 3.03
CCM2-211ENST00000478582 API5Q9BZZ5 524 aaKnown RBP33.98■■■■□ 3.03
CCM2-211ENST00000478582 CACNA1SQ13698 1873 aa33.97■■■■□ 3.03
CCM2-211ENST00000478582 GCKRQ14397 625 aa33.97■■■■□ 3.03
CCM2-211ENST00000478582 CRY2Q49AN0 593 aa33.97■■■■□ 3.03
CCM2-211ENST00000478582 ALDH1L1O75891 902 aa33.96■■■■□ 3.03
CCM2-211ENST00000478582 ALDH1B1P30837 517 aa33.96■■■■□ 3.03
CCM2-211ENST00000478582 SOGA3Q5TF21 947 aa33.96■■■■□ 3.03
CCM2-211ENST00000478582 SLC4A10Q6U841 1118 aa33.96■■■■□ 3.03
CCM2-211ENST00000478582 NLRP3Q96P20 1036 aa33.96■■■■□ 3.03
CCM2-211ENST00000478582 IPO8O15397 1037 aaKnown RBP33.95■■■■□ 3.03
CCM2-211ENST00000478582 PRELPP51888 382 aa33.95■■■■□ 3.03
CCM2-211ENST00000478582 C7orf43Q8WVR3 580 aa33.95■■■■□ 3.03
CCM2-211ENST00000478582 SRCIN1Q9C0H9 1055 aa33.95■■■■□ 3.03
CCM2-211ENST00000478582 TNRC6CQ9HCJ0 1690 aaKnown RBP33.94■■■■□ 3.02
CCM2-211ENST00000478582 H7C1W4 665 aa33.94■■■■□ 3.02
CCM2-211ENST00000478582 HCLS1P14317 486 aaPredicted RBP33.94■■■■□ 3.02
CCM2-211ENST00000478582 HSP90B1P14625 803 aaKnown RBP33.94■■■■□ 3.02
CCM2-211ENST00000478582 CDHR2Q9BYE9 1310 aa33.94■■■■□ 3.02
CCM2-211ENST00000478582 FER1L6Q2WGJ9 1857 aa33.94■■■■□ 3.02
CCM2-211ENST00000478582 IRS4O14654 1257 aaPredicted RBP33.93■■■■□ 3.02
CCM2-211ENST00000478582 CCDC88AQ3V6T2 1871 aa33.93■■■■□ 3.02
CCM2-211ENST00000478582 LTBP3Q9NS15 1303 aa33.91■■■■□ 3.02
CCM2-211ENST00000478582 ZC3H4Q9UPT8 1303 aaKnown RBP33.91■■■■□ 3.02
CCM2-211ENST00000478582 RTL5Q5HYW3 569 aaPredicted RBP33.91■■■■□ 3.02
CCM2-211ENST00000478582 C3orf67Q6ZVT6 689 aa33.91■■■■□ 3.02
CCM2-211ENST00000478582 KIF3CO14782 793 aa33.89■■■■□ 3.02
CCM2-211ENST00000478582 HOXA10P31260 410 aaPredicted RBP33.89■■■■□ 3.02
CCM2-211ENST00000478582 CASP7P55210 303 aa33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms