RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, human

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF1-209	ENST00000478424	LRP10	Q7Z4F1	713 aa		32.48	■■■□□ 2.79
ARF1-209	ENST00000478424	SYNE4	Q8N205	404 aa		32.48	■■■□□ 2.79
ARF1-209	ENST00000478424	XAGE3	Q8WTP9	111 aa		32.48	■■■□□ 2.79
ARF1-209	ENST00000478424	IARS	P41252	1262 aa	Known RBP	32.47	■■■□□ 2.79
ARF1-209	ENST00000478424	RBM17	Q96I25	401 aa	Known RBP	32.47	■■■□□ 2.79
ARF1-209	ENST00000478424	TRIM35	Q9UPQ4	493 aa		32.47	■■■□□ 2.79
ARF1-209	ENST00000478424	RIC1	Q4ADV7	1423 aa		32.46	■■■□□ 2.79
ARF1-209	ENST00000478424	C3orf67	Q6ZVT6	689 aa		32.46	■■■□□ 2.79
ARF1-209	ENST00000478424	COPS6	Q7L5N1	327 aa		32.46	■■■□□ 2.79
ARF1-209	ENST00000478424	UTP14A	Q9BVJ6	771 aa	Known RBP	32.46	■■■□□ 2.79
ARF1-209	ENST00000478424	POTEI	P0CG38	1075 aa		32.45	■■■□□ 2.79
ARF1-209	ENST00000478424	POTEJ	P0CG39	1038 aa		32.45	■■■□□ 2.79
ARF1-209	ENST00000478424	IQCA1L	A6NCM1	817 aa		32.44	■■■□□ 2.78
ARF1-209	ENST00000478424	CHL1	O00533	1208 aa		32.44	■■■□□ 2.78
ARF1-209	ENST00000478424	PPEF1	O14829	653 aa	Predicted RBP	32.44	■■■□□ 2.78
ARF1-209	ENST00000478424	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.44	■■■□□ 2.78
ARF1-209	ENST00000478424	CHADL	Q6NUI6	762 aa		32.43	■■■□□ 2.78
ARF1-209	ENST00000478424	SLC51A	Q86UW1	340 aa		32.43	■■■□□ 2.78
ARF1-209	ENST00000478424	ZNF428	Q96B54	188 aa		32.43	■■■□□ 2.78
ARF1-209	ENST00000478424	NLRP3	Q96P20	1036 aa		32.43	■■■□□ 2.78
ARF1-209	ENST00000478424	HOXA10	P31260	410 aa	Predicted RBP	32.42	■■■□□ 2.78
ARF1-209	ENST00000478424	HDGFL1	Q5TGJ6	251 aa		32.42	■■■□□ 2.78
ARF1-209	ENST00000478424	CHPF2	Q9P2E5	772 aa		32.42	■■■□□ 2.78
ARF1-209	ENST00000478424	EAPP	Q56P03	285 aa	Predicted RBP	32.41	■■■□□ 2.78
ARF1-209	ENST00000478424	HSP90AB3P	Q58FF7	597 aa		32.41	■■■□□ 2.78
ARF1-209	ENST00000478424	CC2D2B	Q6DHV5	1058 aa		32.41	■■■□□ 2.78
ARF1-209	ENST00000478424	JDP2	Q8WYK2	163 aa		32.41	■■■□□ 2.78
ARF1-209	ENST00000478424	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.41	■■■□□ 2.78
ARF1-209	ENST00000478424	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.4	■■■□□ 2.78
ARF1-209	ENST00000478424	PSMD1	Q99460	953 aa		32.4	■■■□□ 2.78
ARF1-209	ENST00000478424	IFFO2	Q5TF58	517 aa		32.39	■■■□□ 2.78
ARF1-209	ENST00000478424	CRAMP1	Q96RY5	1269 aa		32.39	■■■□□ 2.78
ARF1-209	ENST00000478424	TMX4	Q9H1E5	349 aa	Predicted RBP	32.39	■■■□□ 2.78
ARF1-209	ENST00000478424	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.39	■■■□□ 2.78
ARF1-209	ENST00000478424	ANKRD36C	Q5JPF3	1778 aa		32.38	■■■□□ 2.77
ARF1-209	ENST00000478424	RNF123	Q5XPI4	1314 aa		32.37	■■■□□ 2.77
ARF1-209	ENST00000478424	HACL1	Q9UJ83	578 aa		32.37	■■■□□ 2.77
ARF1-209	ENST00000478424	SNED1	Q8TER0	1413 aa		32.36	■■■□□ 2.77
ARF1-209	ENST00000478424	HCLS1	P14317	486 aa	Predicted RBP	32.36	■■■□□ 2.77
ARF1-209	ENST00000478424	NLRP10	Q86W26	655 aa		32.36	■■■□□ 2.77
ARF1-209	ENST00000478424	LARGE2	Q8N3Y3	721 aa		32.36	■■■□□ 2.77
ARF1-209	ENST00000478424	TRMT112	Q9UI30	125 aa	Known RBP	32.36	■■■□□ 2.77
ARF1-209	ENST00000478424	GJA3	Q9Y6H8	435 aa		32.36	■■■□□ 2.77
ARF1-209	ENST00000478424	SCN4A	P35499	1836 aa		32.35	■■■□□ 2.77
ARF1-209	ENST00000478424	LDHD	Q86WU2	507 aa		32.35	■■■□□ 2.77
ARF1-209	ENST00000478424	JMY	Q8N9B5	988 aa		32.35	■■■□□ 2.77
ARF1-209	ENST00000478424	CLEC11A	Q9Y240	323 aa		32.35	■■■□□ 2.77
ARF1-209	ENST00000478424	ABCC4	O15439	1325 aa		32.34	■■■□□ 2.77
ARF1-209	ENST00000478424	FZD9	O00144	591 aa		32.34	■■■□□ 2.77
ARF1-209	ENST00000478424	EIF6	P56537	245 aa	Known RBP	32.34	■■■□□ 2.77
ARF1-209	ENST00000478424	TCIRG1	Q13488	830 aa		32.34	■■■□□ 2.77
ARF1-209	ENST00000478424	APAF1	O14727	1248 aa		32.33	■■■□□ 2.77
ARF1-209	ENST00000478424	DUSP27	Q5VZP5	1158 aa		32.33	■■■□□ 2.77
ARF1-209	ENST00000478424	CFAP44	Q96MT7	982 aa		32.33	■■■□□ 2.77
ARF1-209	ENST00000478424	MBIP	Q9NS73	344 aa		32.33	■■■□□ 2.77
ARF1-209	ENST00000478424	SH3TC1	Q8TE82	1336 aa		32.32	■■■□□ 2.76
ARF1-209	ENST00000478424	EPHX2	P34913	555 aa		32.32	■■■□□ 2.76
ARF1-209	ENST00000478424	COL4A5	P29400	1685 aa		32.31	■■■□□ 2.76
ARF1-209	ENST00000478424	HOXB7	P09629	217 aa		32.31	■■■□□ 2.76
ARF1-209	ENST00000478424	GRIPAP1	Q4V328	841 aa		32.31	■■■□□ 2.76
ARF1-209	ENST00000478424	SLC10A5	Q5PT55	438 aa		32.31	■■■□□ 2.76
ARF1-209	ENST00000478424	GPC2	Q8N158	579 aa		32.31	■■■□□ 2.76
ARF1-209	ENST00000478424	DBF4	Q9UBU7	674 aa	Predicted RBP	32.31	■■■□□ 2.76
ARF1-209	ENST00000478424	PPIP5K2	O43314	1243 aa		32.3	■■■□□ 2.76
ARF1-209	ENST00000478424	NIM1K	Q8IY84	436 aa		32.3	■■■□□ 2.76
ARF1-209	ENST00000478424	PLBD2	Q8NHP8	589 aa		32.29	■■■□□ 2.76
ARF1-209	ENST00000478424	LAMB2	P55268	1798 aa		32.28	■■■□□ 2.76
ARF1-209	ENST00000478424	ANKRD13D	Q6ZTN6	518 aa		32.28	■■■□□ 2.76
ARF1-209	ENST00000478424	DDX46	Q7L014	1031 aa	Known RBP	32.28	■■■□□ 2.76
ARF1-209	ENST00000478424	MKRN1	Q9UHC7	482 aa	Known RBP	32.28	■■■□□ 2.76
ARF1-209	ENST00000478424	ATP6V0A2	Q9Y487	856 aa		32.28	■■■□□ 2.76
ARF1-209	ENST00000478424	ATP5J2-PTCD1	G3V325	749 aa		32.27	■■■□□ 2.76
ARF1-209	ENST00000478424	LMOD1	P29536	600 aa	Predicted RBP	32.27	■■■□□ 2.76
ARF1-209	ENST00000478424	AOC3	Q16853	763 aa		32.27	■■■□□ 2.76
ARF1-209	ENST00000478424	CREBZF	Q9NS37	354 aa		32.27	■■■□□ 2.76
ARF1-209	ENST00000478424	ELL2	O00472	640 aa	Predicted RBP	32.26	■■■□□ 2.75
ARF1-209	ENST00000478424	HYPK	Q9NX55	129 aa		32.26	■■■□□ 2.75
ARF1-209	ENST00000478424	CALD1	Q05682	793 aa	Known RBP	32.25	■■■□□ 2.75
ARF1-209	ENST00000478424	RTL5	Q5HYW3	569 aa	Predicted RBP	32.25	■■■□□ 2.75
ARF1-209	ENST00000478424	DPP8	Q6V1X1	898 aa	Predicted RBP	32.24	■■■□□ 2.75
ARF1-209	ENST00000478424	PNMA8A	Q86V59	439 aa	Predicted RBP	32.24	■■■□□ 2.75
ARF1-209	ENST00000478424	IFT57	Q9NWB7	429 aa		32.24	■■■□□ 2.75
ARF1-209	ENST00000478424	GNAI1	P63096	354 aa		32.23	■■■□□ 2.75
ARF1-209	ENST00000478424	FAM89A	Q96GI7	184 aa		32.23	■■■□□ 2.75
ARF1-209	ENST00000478424	BBOX1	O75936	387 aa		32.22	■■■□□ 2.75
ARF1-209	ENST00000478424	GRAP	Q13588	217 aa		32.22	■■■□□ 2.75
ARF1-209	ENST00000478424	MAP1S	Q66K74	1059 aa	Predicted RBP	32.22	■■■□□ 2.75
ARF1-209	ENST00000478424	SUPT20H	Q8NEM7	779 aa		32.22	■■■□□ 2.75
ARF1-209	ENST00000478424	GRAPL	Q8TC17	118 aa	Predicted RBP	32.22	■■■□□ 2.75
ARF1-209	ENST00000478424	GOLGA2	Q08379	1002 aa		32.21	■■■□□ 2.75
ARF1-209	ENST00000478424	MPND	Q8N594	471 aa		32.21	■■■□□ 2.75
ARF1-209	ENST00000478424	ZNF853	P0CG23	659 aa		32.2	■■■□□ 2.75
ARF1-209	ENST00000478424	HSPA1A	P0DMV8	641 aa	Known RBP	32.2	■■■□□ 2.75
ARF1-209	ENST00000478424	HSPA1B	P0DMV9	641 aa	Known RBP	32.2	■■■□□ 2.75
ARF1-209	ENST00000478424	RIC3	Q7Z5B4	369 aa		32.2	■■■□□ 2.75
ARF1-209	ENST00000478424	PASK	Q96RG2	1323 aa		32.2	■■■□□ 2.74
ARF1-209	ENST00000478424	SP8	Q8IXZ3	490 aa		32.19	■■■□□ 2.74
ARF1-209	ENST00000478424	ISCA1	Q9BUE6	129 aa		32.19	■■■□□ 2.74
ARF1-209	ENST00000478424	TAF1	P21675	1872 aa		32.18	■■■□□ 2.74
ARF1-209	ENST00000478424	EPS15	P42566	896 aa		32.18	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms