RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
LMNA-214ENST00000478063 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
LMNA-214ENST00000478063 UBE3BQ7Z3V4 1068 aa16.69■□□□□ 0.26
LMNA-214ENST00000478063 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
LMNA-214ENST00000478063 RGL2O15211 777 aa16.68■□□□□ 0.26
LMNA-214ENST00000478063 CLEC4GQ6UXB4 293 aa16.68■□□□□ 0.26
LMNA-214ENST00000478063 NLRP10Q86W26 655 aa16.68■□□□□ 0.26
LMNA-214ENST00000478063 ZNF34Q8IZ26 560 aa16.68■□□□□ 0.26
LMNA-214ENST00000478063 JARID2Q92833 1246 aaPredicted RBP16.68■□□□□ 0.26
LMNA-214ENST00000478063 RWDD1Q9H446 243 aaPredicted RBP16.68■□□□□ 0.26
LMNA-214ENST00000478063 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
LMNA-214ENST00000478063 UBN2Q6ZU65 1347 aa16.68■□□□□ 0.26
LMNA-214ENST00000478063 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
LMNA-214ENST00000478063 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
LMNA-214ENST00000478063 ANKRD44Q8N8A2 993 aa16.67■□□□□ 0.26
LMNA-214ENST00000478063 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
LMNA-214ENST00000478063 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
LMNA-214ENST00000478063 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
LMNA-214ENST00000478063 H7C1W4 665 aa16.66■□□□□ 0.26
LMNA-214ENST00000478063 IGHDP01880 384 aa16.66■□□□□ 0.26
LMNA-214ENST00000478063 HDAC1Q13547 482 aaPredicted RBP16.66■□□□□ 0.26
LMNA-214ENST00000478063 PARP10Q53GL7 1025 aa16.66■□□□□ 0.26
LMNA-214ENST00000478063 RPAP2Q8IXW5 612 aaPredicted RBP16.66■□□□□ 0.26
LMNA-214ENST00000478063 MSH5O43196 834 aa16.65■□□□□ 0.26
LMNA-214ENST00000478063 PCCAP05165 728 aaPredicted RBP16.65■□□□□ 0.26
LMNA-214ENST00000478063 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
LMNA-214ENST00000478063 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
LMNA-214ENST00000478063 CENPQQ7L2Z9 268 aaPredicted RBP16.65■□□□□ 0.26
LMNA-214ENST00000478063 FLAD1Q8NFF5 587 aa16.65■□□□□ 0.26
LMNA-214ENST00000478063 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
LMNA-214ENST00000478063 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
LMNA-214ENST00000478063 SPEF2Q9C093 1822 aa16.65■□□□□ 0.26
LMNA-214ENST00000478063 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
LMNA-214ENST00000478063 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
LMNA-214ENST00000478063 CASP7P55210 303 aa16.64■□□□□ 0.25
LMNA-214ENST00000478063 SIRT2Q8IXJ6 389 aa16.64■□□□□ 0.25
LMNA-214ENST00000478063 ZBTB38Q8NAP3 1195 aaPredicted RBP16.64■□□□□ 0.25
LMNA-214ENST00000478063 BICC1Q9H694 974 aaKnown RBP16.64■□□□□ 0.25
LMNA-214ENST00000478063 HMMRO75330 724 aa16.63■□□□□ 0.25
LMNA-214ENST00000478063 ATP8B2P98198 1209 aa16.63■□□□□ 0.25
LMNA-214ENST00000478063 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
LMNA-214ENST00000478063 SUSD4Q5VX71 490 aa16.63■□□□□ 0.25
LMNA-214ENST00000478063 PPP1R42Q7Z4L9 355 aa16.63■□□□□ 0.25
LMNA-214ENST00000478063 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
LMNA-214ENST00000478063 KAZALD1Q96I82 304 aa16.63■□□□□ 0.25
LMNA-214ENST00000478063 UTP14AQ9BVJ6 771 aaKnown RBP16.63■□□□□ 0.25
LMNA-214ENST00000478063 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
LMNA-214ENST00000478063 COL23A1Q86Y22 540 aaPredicted RBP16.62■□□□□ 0.25
LMNA-214ENST00000478063 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
LMNA-214ENST00000478063 CDHR2Q9BYE9 1310 aa16.62■□□□□ 0.25
LMNA-214ENST00000478063 PNMA6EA0A0J9YXQ4 647 aa16.61■□□□□ 0.25
LMNA-214ENST00000478063 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
LMNA-214ENST00000478063 GYS1P13807 737 aa16.61■□□□□ 0.25
LMNA-214ENST00000478063 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
LMNA-214ENST00000478063 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.25
LMNA-214ENST00000478063 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
LMNA-214ENST00000478063 NTSR2O95665 410 aa16.6■□□□□ 0.25
LMNA-214ENST00000478063 MTX1Q13505 466 aa16.6■□□□□ 0.25
LMNA-214ENST00000478063 CARMIL3Q8ND23 1372 aa16.6■□□□□ 0.25
LMNA-214ENST00000478063 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
LMNA-214ENST00000478063 FOXO4P98177 505 aa16.59■□□□□ 0.25
LMNA-214ENST00000478063 NFIXQ14938 502 aa16.59■□□□□ 0.25
LMNA-214ENST00000478063 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
LMNA-214ENST00000478063 NYXQ9GZU5 481 aa16.59■□□□□ 0.25
LMNA-214ENST00000478063 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
LMNA-214ENST00000478063 NRXN2Q9P2S2 1712 aa16.59■□□□□ 0.25
LMNA-214ENST00000478063 TAF1P21675 1872 aa16.59■□□□□ 0.25
LMNA-214ENST00000478063 GTF2E1P29083 439 aaPredicted RBP16.58■□□□□ 0.24
LMNA-214ENST00000478063 POLA2Q14181 598 aa16.58■□□□□ 0.24
LMNA-214ENST00000478063 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
LMNA-214ENST00000478063 LMBR1LQ6UX01 489 aa16.58■□□□□ 0.24
LMNA-214ENST00000478063 NBPF5PQ86XG9 351 aaPredicted RBP16.58■□□□□ 0.24
LMNA-214ENST00000478063 NUTM1Q86Y26 1132 aa16.58■□□□□ 0.24
LMNA-214ENST00000478063 SSH3Q8TE77 659 aa16.58■□□□□ 0.24
LMNA-214ENST00000478063 CHMP3Q9Y3E7 222 aa16.58■□□□□ 0.24
LMNA-214ENST00000478063 ANKRD31Q8N7Z5 1873 aa16.57■□□□□ 0.24
LMNA-214ENST00000478063 NPHP1O15259 732 aa16.57■□□□□ 0.24
LMNA-214ENST00000478063 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
LMNA-214ENST00000478063 GCC1Q96CN9 775 aa16.57■□□□□ 0.24
LMNA-214ENST00000478063 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
LMNA-214ENST00000478063 PDE8AO60658 829 aa16.56■□□□□ 0.24
LMNA-214ENST00000478063 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
LMNA-214ENST00000478063 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
LMNA-214ENST00000478063 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
LMNA-214ENST00000478063 NLGN1Q8N2Q7 840 aa16.56■□□□□ 0.24
LMNA-214ENST00000478063 DCTPP1Q9H773 170 aa16.56■□□□□ 0.24
LMNA-214ENST00000478063 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
LMNA-214ENST00000478063 CTSWP56202 376 aa16.55■□□□□ 0.24
LMNA-214ENST00000478063 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
LMNA-214ENST00000478063 EXOC6BQ9Y2D4 811 aa16.55■□□□□ 0.24
LMNA-214ENST00000478063 APBB1O00213 710 aa16.54■□□□□ 0.24
LMNA-214ENST00000478063 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
LMNA-214ENST00000478063 MSL1Q68DK7 614 aa16.54■□□□□ 0.24
LMNA-214ENST00000478063 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
LMNA-214ENST00000478063 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
LMNA-214ENST00000478063 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
LMNA-214ENST00000478063 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
LMNA-214ENST00000478063 SERPINB2P05120 415 aa16.53■□□□□ 0.24
LMNA-214ENST00000478063 TM4SF1P30408 202 aa16.53■□□□□ 0.24
LMNA-214ENST00000478063 DDR1Q08345 913 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms