RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 SBNO1A3KN83 1393 aa10.03□□□□□ -0.8
USP33-208ENST00000477949 NUP155O75694 1391 aa10.03□□□□□ -0.8
USP33-208ENST00000477949 KCNQ2O43526 872 aa10.03□□□□□ -0.8
USP33-208ENST00000477949 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
USP33-208ENST00000477949 MEIOBQ8N635 442 aa10.03□□□□□ -0.8
USP33-208ENST00000477949 EMILIN1Q9Y6C2 1016 aa10.03□□□□□ -0.8
USP33-208ENST00000477949 RGPD8O14715 1765 aaPredicted RBP10.03□□□□□ -0.8
USP33-208ENST00000477949 KIF1BO60333 1816 aa10.03□□□□□ -0.8
USP33-208ENST00000477949 MYOM1P52179 1685 aa10.02□□□□□ -0.8
USP33-208ENST00000477949 ROCK1Q13464 1354 aa10.02□□□□□ -0.8
USP33-208ENST00000477949 KNDC1Q76NI1 1749 aa10.02□□□□□ -0.8
USP33-208ENST00000477949 TRPM3Q9HCF6 1732 aaPredicted RBP10.02□□□□□ -0.8
USP33-208ENST00000477949 RRBP1Q9P2E9 1410 aaKnown RBP10.02□□□□□ -0.81
USP33-208ENST00000477949 PPLO60437 1756 aa10.02□□□□□ -0.81
USP33-208ENST00000477949 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
USP33-208ENST00000477949 TRIM37O94972 964 aa10.02□□□□□ -0.81
USP33-208ENST00000477949 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
USP33-208ENST00000477949 TSEN34Q9BSV6 310 aaKnown RBP10.02□□□□□ -0.81
USP33-208ENST00000477949 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
USP33-208ENST00000477949 FSHRP23945 695 aa10.01□□□□□ -0.81
USP33-208ENST00000477949 CCDC116Q8IYX3 515 aa10.01□□□□□ -0.81
USP33-208ENST00000477949 NRXN1Q9ULB1 1477 aa10.01□□□□□ -0.81
USP33-208ENST00000477949 ALS2Q96Q42 1657 aa10.01□□□□□ -0.81
USP33-208ENST00000477949 IFT172Q9UG01 1749 aa10.01□□□□□ -0.81
USP33-208ENST00000477949 PPFIA3O75145 1194 aa10□□□□□ -0.81
USP33-208ENST00000477949 CTDSPL2Q05D32 466 aa10□□□□□ -0.81
USP33-208ENST00000477949 BTG4Q9NY30 223 aa10□□□□□ -0.81
USP33-208ENST00000477949 ARHGEF10O15013 1369 aa10□□□□□ -0.81
USP33-208ENST00000477949 RGPD3A6NKT7 1758 aaPredicted RBP9.99□□□□□ -0.81
USP33-208ENST00000477949 RGPD4Q7Z3J3 1758 aa9.99□□□□□ -0.81
USP33-208ENST00000477949 APBA3O96018 575 aa9.99□□□□□ -0.81
USP33-208ENST00000477949 PDXDC2PQ6P474 469 aa9.99□□□□□ -0.81
USP33-208ENST00000477949 PPP1R1BQ9UD71 204 aaPredicted RBP9.99□□□□□ -0.81
USP33-208ENST00000477949 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
USP33-208ENST00000477949 FAM196AQ6ZSG2 479 aa9.98□□□□□ -0.81
USP33-208ENST00000477949 WAPLQ7Z5K2 1190 aa9.98□□□□□ -0.81
USP33-208ENST00000477949 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
USP33-208ENST00000477949 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
USP33-208ENST00000477949 SPATA31A1Q5TZJ5 1347 aa9.97□□□□□ -0.81
USP33-208ENST00000477949 ABCC11Q96J66 1382 aa9.97□□□□□ -0.81
USP33-208ENST00000477949 PDGFDQ9GZP0 370 aaPredicted RBP9.96□□□□□ -0.82
USP33-208ENST00000477949 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
USP33-208ENST00000477949 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.82
USP33-208ENST00000477949 PEAK1Q9H792 1746 aa9.96□□□□□ -0.82
USP33-208ENST00000477949 PRELPP51888 382 aa9.95□□□□□ -0.82
USP33-208ENST00000477949 FAM50AQ14320 339 aaKnown RBP9.95□□□□□ -0.82
USP33-208ENST00000477949 SKIV2LQ15477 1246 aaKnown RBP9.95□□□□□ -0.82
USP33-208ENST00000477949 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.95□□□□□ -0.82
USP33-208ENST00000477949 NBPF8Q3BBV2 869 aa9.95□□□□□ -0.82
USP33-208ENST00000477949 PPP1R26Q5T8A7 1209 aaPredicted RBP9.95□□□□□ -0.82
USP33-208ENST00000477949 ARHGAP9Q9BRR9 750 aa9.95□□□□□ -0.82
USP33-208ENST00000477949 FKBPLQ9UIM3 349 aa9.95□□□□□ -0.82
USP33-208ENST00000477949 CDV3Q9UKY7 258 aaKnown RBP9.95□□□□□ -0.82
USP33-208ENST00000477949 TTLL8A6PVC2 850 aa9.94□□□□□ -0.82
USP33-208ENST00000477949 PSME1Q06323 249 aa9.94□□□□□ -0.82
USP33-208ENST00000477949 RPGRIP1LQ68CZ1 1315 aa9.93□□□□□ -0.82
USP33-208ENST00000477949 Q6ZVU0 165 aa9.93□□□□□ -0.82
USP33-208ENST00000477949 ZBTB33Q86T24 672 aa9.93□□□□□ -0.82
USP33-208ENST00000477949 LRRN4Q8WUT4 740 aa9.93□□□□□ -0.82
USP33-208ENST00000477949 KCTD15Q96SI1 283 aaPredicted RBP9.93□□□□□ -0.82
USP33-208ENST00000477949 ADGRF5Q8IZF2 1346 aa9.92□□□□□ -0.82
USP33-208ENST00000477949 SBF2Q86WG5 1849 aa9.92□□□□□ -0.82
USP33-208ENST00000477949 SYT17Q9BSW7 474 aa9.92□□□□□ -0.82
USP33-208ENST00000477949 PHRF1Q9P1Y6 1649 aaKnown RBP9.92□□□□□ -0.82
USP33-208ENST00000477949 PCNTO95613 3336 aa9.92□□□□□ -0.82
USP33-208ENST00000477949 DLC1Q96QB1 1528 aa9.92□□□□□ -0.82
USP33-208ENST00000477949 PARP4Q9UKK3 1724 aaKnown RBP9.91□□□□□ -0.82
USP33-208ENST00000477949 ZC3H4Q9UPT8 1303 aaKnown RBP9.91□□□□□ -0.82
USP33-208ENST00000477949 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
USP33-208ENST00000477949 CBLBQ13191 982 aa9.91□□□□□ -0.82
USP33-208ENST00000477949 SLC10A4Q96EP9 437 aa9.91□□□□□ -0.82
USP33-208ENST00000477949 FHDC1Q9C0D6 1143 aaPredicted RBP9.91□□□□□ -0.82
USP33-208ENST00000477949 ANKARQ7Z5J8 1434 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 MAP3K5Q99683 1374 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 FIGNL2A6NMB9 653 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 SPINT1O43278 529 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
USP33-208ENST00000477949 PTSQ03393 145 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 PTK2Q05397 1052 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 NR6A1Q15406 480 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 PPP2R2DQ66LE6 453 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 PROCA1Q8NCQ7 364 aaPredicted RBP9.9□□□□□ -0.82
USP33-208ENST00000477949 STK26Q9P289 416 aa9.9□□□□□ -0.82
USP33-208ENST00000477949 PIK3C2GO75747 1445 aa9.9□□□□□ -0.83
USP33-208ENST00000477949 YTHDC2Q9H6S0 1430 aaKnown RBP9.9□□□□□ -0.83
USP33-208ENST00000477949 LMO7Q8WWI1 1683 aa9.9□□□□□ -0.83
USP33-208ENST00000477949 ZBTB7AO95365 584 aa9.89□□□□□ -0.83
USP33-208ENST00000477949 SH3D19Q5HYK7 790 aa9.89□□□□□ -0.83
USP33-208ENST00000477949 SSH2Q76I76 1423 aa9.89□□□□□ -0.83
USP33-208ENST00000477949 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
USP33-208ENST00000477949 PLSCR1O15162 318 aa9.88□□□□□ -0.83
USP33-208ENST00000477949 TMEM132EQ6IEE7 984 aa9.88□□□□□ -0.83
USP33-208ENST00000477949 SIRT1Q96EB6 747 aa9.88□□□□□ -0.83
USP33-208ENST00000477949 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.88□□□□□ -0.83
USP33-208ENST00000477949 GPSM3Q9Y4H4 160 aa9.88□□□□□ -0.83
USP33-208ENST00000477949 ACIN1Q9UKV3 1341 aaKnown RBP9.87□□□□□ -0.83
USP33-208ENST00000477949 PTF1AQ7RTS3 328 aa9.87□□□□□ -0.83
USP33-208ENST00000477949 GPR161Q8N6U8 529 aaKnown RBP9.87□□□□□ -0.83
USP33-208ENST00000477949 PMFBP1Q8TBY8 1022 aa9.87□□□□□ -0.83
USP33-208ENST00000477949 DDRGK1Q96HY6 314 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms