RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TERF2Q15554 542 aa18.1■□□□□ 0.49
CLSTN1-205ENST00000477264 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
CLSTN1-205ENST00000477264 NUP62CLQ9H1M0 184 aa18.1■□□□□ 0.49
CLSTN1-205ENST00000477264 SH2B1Q9NRF2 756 aaPredicted RBP18.1■□□□□ 0.49
CLSTN1-205ENST00000477264 TOM1O60784 492 aa18.09■□□□□ 0.49
CLSTN1-205ENST00000477264 CAVIN2O95810 425 aa18.09■□□□□ 0.49
CLSTN1-205ENST00000477264 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
CLSTN1-205ENST00000477264 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
CLSTN1-205ENST00000477264 PLA2G4DQ86XP0 818 aa18.09■□□□□ 0.49
CLSTN1-205ENST00000477264 CALCOCO1Q9P1Z2 691 aa18.09■□□□□ 0.49
CLSTN1-205ENST00000477264 COL18A1P39060 1754 aa18.09■□□□□ 0.49
CLSTN1-205ENST00000477264 TYRO3Q06418 890 aa18.08■□□□□ 0.49
CLSTN1-205ENST00000477264 DCTN1Q14203 1278 aa18.08■□□□□ 0.49
CLSTN1-205ENST00000477264 TDRD7Q8NHU6 1098 aaKnown RBP18.08■□□□□ 0.49
CLSTN1-205ENST00000477264 C16orf45Q96MC5 204 aaPredicted RBP18.08■□□□□ 0.49
CLSTN1-205ENST00000477264 PRDM11Q9NQV5 511 aa18.08■□□□□ 0.49
CLSTN1-205ENST00000477264 AHDC1Q5TGY3 1603 aaPredicted RBP18.08■□□□□ 0.48
CLSTN1-205ENST00000477264 FAM53CQ9NYF3 392 aa18.08■□□□□ 0.48
CLSTN1-205ENST00000477264 SNX14Q9Y5W7 946 aa18.08■□□□□ 0.48
CLSTN1-205ENST00000477264 MRVI1Q9Y6F6 885 aa18.08■□□□□ 0.48
CLSTN1-205ENST00000477264 ABCA3Q99758 1704 aa18.08■□□□□ 0.48
CLSTN1-205ENST00000477264 CSB-PGBD3P0DP91 1061 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 ZNF75DP51815 510 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 AK2P54819 239 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 PDE4CQ08493 712 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 ZSCAN25Q6NSZ9 544 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 CCDC186Q7Z3E2 898 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 MTMR6Q9Y217 621 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 TIGD1Q96MW7 591 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 TSPYL1Q9H0U9 437 aa18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 DDX19AQ9NUU7 478 aaKnown RBP18.07■□□□□ 0.48
CLSTN1-205ENST00000477264 KRT85P78386 507 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 ATP8B2P98198 1209 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 RBM43Q6ZSC3 357 aaKnown RBP18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 MCM10Q7L590 875 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 NLRP2Q9NX02 1062 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 CAMTA1Q9Y6Y1 1673 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 GNAT3A8MTJ3 354 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 SGSM2O43147 1006 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 HTATSF1O43719 755 aaKnown RBP18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 DNM1Q05193 864 aaKnown RBP18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 RUFY3Q7L099 469 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 DRC7Q8IY82 874 aa18.06■□□□□ 0.48
CLSTN1-205ENST00000477264 KIF2AO00139 706 aaPredicted RBP18.05■□□□□ 0.48
CLSTN1-205ENST00000477264 TPD52L1Q16890 204 aaPredicted RBP18.05■□□□□ 0.48
CLSTN1-205ENST00000477264 CEP135Q66GS9 1140 aa18.05■□□□□ 0.48
CLSTN1-205ENST00000477264 ERO1AQ96HE7 468 aa18.05■□□□□ 0.48
CLSTN1-205ENST00000477264 NCAPD2Q15021 1401 aa18.05■□□□□ 0.48
CLSTN1-205ENST00000477264 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
CLSTN1-205ENST00000477264 CRB1P82279 1406 aa18.04■□□□□ 0.48
CLSTN1-205ENST00000477264 IGSF3O75054 1194 aa18.04■□□□□ 0.48
CLSTN1-205ENST00000477264 GJB2P29033 226 aa18.04■□□□□ 0.48
CLSTN1-205ENST00000477264 PLEKHO1Q53GL0 409 aaPredicted RBP18.04■□□□□ 0.48
CLSTN1-205ENST00000477264 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
CLSTN1-205ENST00000477264 IPO4Q8TEX9 1081 aaKnown RBP18.04■□□□□ 0.48
CLSTN1-205ENST00000477264 CBX8Q9HC52 389 aa18.04■□□□□ 0.48
CLSTN1-205ENST00000477264 PIP4K2BP78356 416 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 VPS53Q5VIR6 699 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 DNAJC2Q99543 621 aaKnown RBP18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 TM6SF1Q9BZW5 370 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 TRIM5Q9C035 493 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 MAP3K5Q99683 1374 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 RAB11FIP3O75154 756 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 LSG1Q9H089 658 aaKnown RBP18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 TNMDQ9H2S6 317 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 LRRC37A3O60309 1634 aa18.03■□□□□ 0.48
CLSTN1-205ENST00000477264 PHLPP1O60346 1717 aa18.02■□□□□ 0.48
CLSTN1-205ENST00000477264 PDCP20941 246 aa18.02■□□□□ 0.48
CLSTN1-205ENST00000477264 RBM6P78332 1123 aaKnown RBP18.02■□□□□ 0.48
CLSTN1-205ENST00000477264 SARM1Q6SZW1 724 aa18.02■□□□□ 0.48
CLSTN1-205ENST00000477264 RAPGEF4Q8WZA2 1011 aa18.02■□□□□ 0.48
CLSTN1-205ENST00000477264 KCND1Q9NSA2 647 aa18.02■□□□□ 0.48
CLSTN1-205ENST00000477264 LMO7Q8WWI1 1683 aa18.02■□□□□ 0.47
CLSTN1-205ENST00000477264 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.47
CLSTN1-205ENST00000477264 LUZP1Q86V48 1076 aa18.01■□□□□ 0.47
CLSTN1-205ENST00000477264 CNTROBQ8N137 903 aa18.01■□□□□ 0.47
CLSTN1-205ENST00000477264 SCAND2PQ9GZW5 306 aaPredicted RBP18.01■□□□□ 0.47
CLSTN1-205ENST00000477264 LRMPQ12912 555 aa18.01■□□□□ 0.47
CLSTN1-205ENST00000477264 ANO6Q4KMQ2 910 aa18.01■□□□□ 0.47
CLSTN1-205ENST00000477264 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
CLSTN1-205ENST00000477264 CLSTN2Q9H4D0 955 aa18.01■□□□□ 0.47
CLSTN1-205ENST00000477264 CLIP2Q9UDT6 1046 aa18.01■□□□□ 0.47
CLSTN1-205ENST00000477264 UBAP1LF5GYI3 381 aa18■□□□□ 0.47
CLSTN1-205ENST00000477264 SLC4A10Q6U841 1118 aa18■□□□□ 0.47
CLSTN1-205ENST00000477264 HYPKQ9NX55 129 aa18■□□□□ 0.47
CLSTN1-205ENST00000477264 IRX5P78411 483 aaPredicted RBP18■□□□□ 0.47
CLSTN1-205ENST00000477264 MYH15Q9Y2K3 1946 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 KCNJ4P48050 445 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 KMT5BQ4FZB7 885 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 C1orf141Q5JVX7 400 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 NYAP1Q6ZVC0 841 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 TTC6Q86TZ1 520 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 CCDC83Q8IWF9 413 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 RUFY2Q8WXA3 655 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 MRFAP1L1Q96HT8 127 aa17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 NAP1L2Q9ULW6 460 aaPredicted RBP17.99■□□□□ 0.47
CLSTN1-205ENST00000477264 TATP17735 454 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms