RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 NIM1KQ8IY84 436 aa16.47■□□□□ 0.23
SBF1-208ENST00000477234 SAGE1Q9NXZ1 904 aa16.47■□□□□ 0.23
SBF1-208ENST00000477234 TSKSQ9UJT2 592 aa16.47■□□□□ 0.23
SBF1-208ENST00000477234 CDHR2Q9BYE9 1310 aa16.46■□□□□ 0.23
SBF1-208ENST00000477234 LTBP1Q14766 1721 aa16.46■□□□□ 0.23
SBF1-208ENST00000477234 AOC2O75106 756 aa16.46■□□□□ 0.23
SBF1-208ENST00000477234 EPS15P42566 896 aa16.46■□□□□ 0.23
SBF1-208ENST00000477234 EIF4G2P78344 907 aaKnown RBP eCLIP16.46■□□□□ 0.23
SBF1-208ENST00000477234 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
SBF1-208ENST00000477234 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
SBF1-208ENST00000477234 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
SBF1-208ENST00000477234 SNRPA1P09661 255 aaKnown RBP16.44■□□□□ 0.22
SBF1-208ENST00000477234 CRY2Q49AN0 593 aa16.44■□□□□ 0.22
SBF1-208ENST00000477234 CDC37L1Q7L3B6 337 aa16.44■□□□□ 0.22
SBF1-208ENST00000477234 SUPT20HQ8NEM7 779 aa16.44■□□□□ 0.22
SBF1-208ENST00000477234 GPRC5DQ9NZD1 345 aa16.44■□□□□ 0.22
SBF1-208ENST00000477234 TRAF5O00463 557 aa16.43■□□□□ 0.22
SBF1-208ENST00000477234 CIAPIN1Q6FI81 312 aa16.43■□□□□ 0.22
SBF1-208ENST00000477234 RBM17Q96I25 401 aaKnown RBP16.43■□□□□ 0.22
SBF1-208ENST00000477234 PGAP2Q9UHJ9 254 aa16.43■□□□□ 0.22
SBF1-208ENST00000477234 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
SBF1-208ENST00000477234 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
SBF1-208ENST00000477234 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
SBF1-208ENST00000477234 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
SBF1-208ENST00000477234 TNRC18O15417 2968 aaPredicted RBP16.41■□□□□ 0.22
SBF1-208ENST00000477234 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
SBF1-208ENST00000477234 HOXA10P31260 410 aaPredicted RBP16.41■□□□□ 0.22
SBF1-208ENST00000477234 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
SBF1-208ENST00000477234 PPIP5K2O43314 1243 aa16.4■□□□□ 0.22
SBF1-208ENST00000477234 TNIP1Q15025 636 aa16.4■□□□□ 0.22
SBF1-208ENST00000477234 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
SBF1-208ENST00000477234 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
SBF1-208ENST00000477234 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
SBF1-208ENST00000477234 CEMIPQ8WUJ3 1361 aa16.39■□□□□ 0.21
SBF1-208ENST00000477234 SNED1Q8TER0 1413 aa16.39■□□□□ 0.21
SBF1-208ENST00000477234 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
SBF1-208ENST00000477234 FMR1Q06787 632 aaKnown RBP eCLIP16.39■□□□□ 0.21
SBF1-208ENST00000477234 PKN2Q16513 984 aaKnown RBP16.39■□□□□ 0.21
SBF1-208ENST00000477234 BCL2L13Q9BXK5 485 aa16.39■□□□□ 0.21
SBF1-208ENST00000477234 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.21
SBF1-208ENST00000477234 AKAP11Q9UKA4 1901 aa16.39■□□□□ 0.21
SBF1-208ENST00000477234 RIC1Q4ADV7 1423 aa16.38■□□□□ 0.21
SBF1-208ENST00000477234 FAM177BA6PVY3 158 aa16.38■□□□□ 0.21
SBF1-208ENST00000477234 ERVV-1B6SEH8 477 aa16.38■□□□□ 0.21
SBF1-208ENST00000477234 H7C1D1 291 aa16.38■□□□□ 0.21
SBF1-208ENST00000477234 HUNKP57058 714 aa16.38■□□□□ 0.21
SBF1-208ENST00000477234 ZNF408Q9H9D4 720 aa16.38■□□□□ 0.21
SBF1-208ENST00000477234 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
SBF1-208ENST00000477234 PPEF1O14829 653 aaPredicted RBP16.37■□□□□ 0.21
SBF1-208ENST00000477234 C2orf69Q8N8R5 385 aa16.37■□□□□ 0.21
SBF1-208ENST00000477234 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
SBF1-208ENST00000477234 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
SBF1-208ENST00000477234 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
SBF1-208ENST00000477234 RGMBQ6NW40 437 aa16.36■□□□□ 0.21
SBF1-208ENST00000477234 CTU1Q7Z7A3 348 aaKnown RBP16.36■□□□□ 0.21
SBF1-208ENST00000477234 GLIS2Q9BZE0 524 aaPredicted RBP16.36■□□□□ 0.21
SBF1-208ENST00000477234 SOX10P56693 466 aa16.35■□□□□ 0.21
SBF1-208ENST00000477234 U2SURPO15042 1029 aaKnown RBP16.34■□□□□ 0.21
SBF1-208ENST00000477234 GMPSP49915 693 aaPredicted RBP16.34■□□□□ 0.21
SBF1-208ENST00000477234 CXCL9Q07325 125 aa16.34■□□□□ 0.21
SBF1-208ENST00000477234 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
SBF1-208ENST00000477234 KIF6Q6ZMV9 814 aa16.34■□□□□ 0.21
SBF1-208ENST00000477234 ATP6V0A2Q9Y487 856 aa16.34■□□□□ 0.21
SBF1-208ENST00000477234 AOC3Q16853 763 aa16.33■□□□□ 0.2
SBF1-208ENST00000477234 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
SBF1-208ENST00000477234 NLRP3Q96P20 1036 aa16.33■□□□□ 0.2
SBF1-208ENST00000477234 RTFDC1Q9BY42 306 aaPredicted RBP16.33■□□□□ 0.2
SBF1-208ENST00000477234 COL4A5P29400 1685 aa16.32■□□□□ 0.2
SBF1-208ENST00000477234 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
SBF1-208ENST00000477234 GBA2Q9HCG7 927 aaPredicted RBP16.32■□□□□ 0.2
SBF1-208ENST00000477234 CNOT7Q9UIV1 285 aaKnown RBP16.32■□□□□ 0.2
SBF1-208ENST00000477234 HTATSF1O43719 755 aaKnown RBP16.31■□□□□ 0.2
SBF1-208ENST00000477234 TRPA1O75762 1119 aa16.31■□□□□ 0.2
SBF1-208ENST00000477234 BBOX1O75936 387 aa16.31■□□□□ 0.2
SBF1-208ENST00000477234 ZNF157P51786 506 aaPredicted RBP16.31■□□□□ 0.2
SBF1-208ENST00000477234 DPP8Q6V1X1 898 aaPredicted RBP16.31■□□□□ 0.2
SBF1-208ENST00000477234 NUTM1Q86Y26 1132 aa16.31■□□□□ 0.2
SBF1-208ENST00000477234 DPF2Q92785 391 aa16.31■□□□□ 0.2
SBF1-208ENST00000477234 NUP98P52948 1817 aa16.31■□□□□ 0.2
SBF1-208ENST00000477234 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
SBF1-208ENST00000477234 KCNQ3O43525 872 aa16.3■□□□□ 0.2
SBF1-208ENST00000477234 KIAA2012Q0VF49 1180 aa16.3■□□□□ 0.2
SBF1-208ENST00000477234 HLFQ16534 295 aa16.3■□□□□ 0.2
SBF1-208ENST00000477234 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
SBF1-208ENST00000477234 KRT26Q7Z3Y9 468 aa16.3■□□□□ 0.2
SBF1-208ENST00000477234 TMC4Q7Z404 712 aa16.3■□□□□ 0.2
SBF1-208ENST00000477234 DCPSQ96C86 337 aaKnown RBP16.3■□□□□ 0.2
SBF1-208ENST00000477234 RNF186Q9NXI6 227 aa16.3■□□□□ 0.2
SBF1-208ENST00000477234 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
SBF1-208ENST00000477234 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
SBF1-208ENST00000477234 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
SBF1-208ENST00000477234 USP48Q86UV5 1035 aa16.29■□□□□ 0.2
SBF1-208ENST00000477234 MPNDQ8N594 471 aa16.29■□□□□ 0.2
SBF1-208ENST00000477234 HDAC9Q9UKV0 1011 aa16.29■□□□□ 0.2
SBF1-208ENST00000477234 NUDCQ9Y266 331 aa16.29■□□□□ 0.2
SBF1-208ENST00000477234 ABCC12Q96J65 1359 aa16.28■□□□□ 0.2
SBF1-208ENST00000477234 FAM155AB1AL88 458 aaPredicted RBP16.28■□□□□ 0.2
SBF1-208ENST00000477234 SP8Q8IXZ3 490 aa16.28■□□□□ 0.2
SBF1-208ENST00000477234 PNISRQ8TF01 805 aaKnown RBP16.28■□□□□ 0.2
SBF1-208ENST00000477234 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms