RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TBC1D2BQ9UPU7 963 aa15.17■□□□□ 0.02
LSM2-212ENST00000477182 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
LSM2-212ENST00000477182 USP50Q70EL3 339 aaPredicted RBP15.16■□□□□ 0.02
LSM2-212ENST00000477182 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
LSM2-212ENST00000477182 ZNF330Q9Y3S2 320 aaPredicted RBP15.16■□□□□ 0.02
LSM2-212ENST00000477182 MAPK8IP3Q9UPT6 1336 aa15.16■□□□□ 0.02
LSM2-212ENST00000477182 SYNE4Q8N205 404 aa15.15■□□□□ 0.02
LSM2-212ENST00000477182 PHACTR3Q96KR7 559 aa15.15■□□□□ 0.02
LSM2-212ENST00000477182 NEFMP07197 916 aa15.14■□□□□ 0.01
LSM2-212ENST00000477182 FMR1Q06787 632 aaKnown RBP eCLIP15.14■□□□□ 0.01
LSM2-212ENST00000477182 SAPCD2Q86UD0 394 aa15.14■□□□□ 0.01
LSM2-212ENST00000477182 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
LSM2-212ENST00000477182 GJA3Q9Y6H8 435 aa15.14■□□□□ 0.01
LSM2-212ENST00000477182 KLRG2A4D1S0 409 aaPredicted RBP15.13■□□□□ 0.01
LSM2-212ENST00000477182 TRAF5O00463 557 aa15.13■□□□□ 0.01
LSM2-212ENST00000477182 APAF1O14727 1248 aa15.13■□□□□ 0.01
LSM2-212ENST00000477182 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
LSM2-212ENST00000477182 ALDH1B1P30837 517 aa15.13■□□□□ 0.01
LSM2-212ENST00000477182 PSMD1Q99460 953 aa15.13■□□□□ 0.01
LSM2-212ENST00000477182 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
LSM2-212ENST00000477182 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
LSM2-212ENST00000477182 EPS15P42566 896 aa15.11■□□□□ 0.01
LSM2-212ENST00000477182 SCNN1DP51172 638 aa15.11■□□□□ 0.01
LSM2-212ENST00000477182 SOX10P56693 466 aa15.11■□□□□ 0.01
LSM2-212ENST00000477182 CIAPIN1Q6FI81 312 aa15.11■□□□□ 0.01
LSM2-212ENST00000477182 CLEC4GQ6UXB4 293 aa15.11■□□□□ 0.01
LSM2-212ENST00000477182 YTHDC1Q96MU7 727 aaKnown RBP15.11■□□□□ 0.01
LSM2-212ENST00000477182 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
LSM2-212ENST00000477182 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
LSM2-212ENST00000477182 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
LSM2-212ENST00000477182 NOGQ13253 232 aa15.1■□□□□ 0.01
LSM2-212ENST00000477182 NFE2L2Q16236 605 aa15.1■□□□□ 0.01
LSM2-212ENST00000477182 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
LSM2-212ENST00000477182 CC2D2BQ6DHV5 1058 aa15.1■□□□□ 0.01
LSM2-212ENST00000477182 OLFM4Q6UX06 510 aa15.1■□□□□ 0.01
LSM2-212ENST00000477182 TPTE2Q6XPS3 522 aa15.1■□□□□ 0.01
LSM2-212ENST00000477182 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
LSM2-212ENST00000477182 ZNF652Q9Y2D9 606 aa15.1■□□□□ 0.01
LSM2-212ENST00000477182 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
LSM2-212ENST00000477182 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
LSM2-212ENST00000477182 GRIPAP1Q4V328 841 aa15.09■□□□□ 0.01
LSM2-212ENST00000477182 GCC1Q96CN9 775 aa15.09■□□□□ 0.01
LSM2-212ENST00000477182 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
LSM2-212ENST00000477182 ZNF790Q6PG37 636 aa15.08■□□□□ 0
LSM2-212ENST00000477182 GAS2L2Q8NHY3 880 aa15.08■□□□□ 0
LSM2-212ENST00000477182 ZNF496Q96IT1 587 aaPredicted RBP15.08■□□□□ 0
LSM2-212ENST00000477182 ADARB2Q9NS39 739 aaKnown RBP15.08■□□□□ 0
LSM2-212ENST00000477182 A1BGP04217 495 aa15.07■□□□□ 0
LSM2-212ENST00000477182 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
LSM2-212ENST00000477182 SAGE1Q9NXZ1 904 aa15.07■□□□□ 0
LSM2-212ENST00000477182 RGL2O15211 777 aa15.06■□□□□ 0
LSM2-212ENST00000477182 RIPK4P57078 832 aa15.06■□□□□ 0
LSM2-212ENST00000477182 FMNL2Q96PY5 1086 aa15.06■□□□□ 0
LSM2-212ENST00000477182 TEFQ10587 303 aa15.05■□□□□ -0
LSM2-212ENST00000477182 NBPF15Q8N660 670 aa15.05■□□□□ -0
LSM2-212ENST00000477182 GPRC5DQ9NZD1 345 aa15.05■□□□□ -0
LSM2-212ENST00000477182 SNED1Q8TER0 1413 aa15.05■□□□□ -0
LSM2-212ENST00000477182 NIM1KQ8IY84 436 aa15.04■□□□□ -0
LSM2-212ENST00000477182 ZC3H15Q8WU90 426 aaKnown RBP15.04■□□□□ -0
LSM2-212ENST00000477182 ZNF408Q9H9D4 720 aa15.04■□□□□ -0
LSM2-212ENST00000477182 PGAP2Q9UHJ9 254 aa15.04■□□□□ -0
LSM2-212ENST00000477182 COL4A5P29400 1685 aa15.03■□□□□ -0
LSM2-212ENST00000477182 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
LSM2-212ENST00000477182 GTF2E1P29083 439 aaPredicted RBP15.03■□□□□ -0
LSM2-212ENST00000477182 CDC37L1Q7L3B6 337 aa15.03■□□□□ -0
LSM2-212ENST00000477182 NGEFQ8N5V2 710 aa15.03■□□□□ -0
LSM2-212ENST00000477182 GLIS2Q9BZE0 524 aaPredicted RBP15.03■□□□□ -0
LSM2-212ENST00000477182 TRIM35Q9UPQ4 493 aa15.03■□□□□ -0
LSM2-212ENST00000477182 NIP7Q9Y221 180 aaKnown RBP eCLIP15.03■□□□□ -0
LSM2-212ENST00000477182 AKAP11Q9UKA4 1901 aa15.02■□□□□ -0
LSM2-212ENST00000477182 DCTN1Q14203 1278 aa15.02■□□□□ -0
LSM2-212ENST00000477182 VPS33BQ9H267 617 aa15.02■□□□□ -0
LSM2-212ENST00000477182 CDHR2Q9BYE9 1310 aa15.01□□□□□ -0.01
LSM2-212ENST00000477182 HUNKP57058 714 aa15.01□□□□□ -0.01
LSM2-212ENST00000477182 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
LSM2-212ENST00000477182 CCDC27Q2M243 656 aa15.01□□□□□ -0.01
LSM2-212ENST00000477182 CRY2Q49AN0 593 aa15.01□□□□□ -0.01
LSM2-212ENST00000477182 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
LSM2-212ENST00000477182 MCM10Q7L590 875 aa15.01□□□□□ -0.01
LSM2-212ENST00000477182 CTU1Q7Z7A3 348 aaKnown RBP15.01□□□□□ -0.01
LSM2-212ENST00000477182 WWC1Q8IX03 1113 aa15.01□□□□□ -0.01
LSM2-212ENST00000477182 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
LSM2-212ENST00000477182 THUMPD2Q9BTF0 503 aaKnown RBP15.01□□□□□ -0.01
LSM2-212ENST00000477182 SIPA1L3O60292 1781 aaPredicted RBP15.01□□□□□ -0.01
LSM2-212ENST00000477182 ZBED9Q6R2W3 1325 aa15□□□□□ -0.01
LSM2-212ENST00000477182 CCDC102AQ96A19 550 aa15□□□□□ -0.01
LSM2-212ENST00000477182 ZIC5Q96T25 663 aa15□□□□□ -0.01
LSM2-212ENST00000477182 FAM177BA6PVY3 158 aa14.99□□□□□ -0.01
LSM2-212ENST00000477182 HTATSF1O43719 755 aaKnown RBP14.99□□□□□ -0.01
LSM2-212ENST00000477182 PKN2Q16513 984 aaKnown RBP14.99□□□□□ -0.01
LSM2-212ENST00000477182 RGMBQ6NW40 437 aa14.99□□□□□ -0.01
LSM2-212ENST00000477182 IL17REQ8NFR9 667 aa14.99□□□□□ -0.01
LSM2-212ENST00000477182 RPGRQ92834 1020 aaKnown RBP14.99□□□□□ -0.01
LSM2-212ENST00000477182 NYXQ9GZU5 481 aa14.99□□□□□ -0.01
LSM2-212ENST00000477182 TMX4Q9H1E5 349 aaPredicted RBP14.99□□□□□ -0.01
LSM2-212ENST00000477182 ZNF521Q96K83 1311 aa14.98□□□□□ -0.01
LSM2-212ENST00000477182 PPIP5K2O43314 1243 aa14.98□□□□□ -0.01
LSM2-212ENST00000477182 TRPA1O75762 1119 aa14.98□□□□□ -0.01
LSM2-212ENST00000477182 RNF186Q9NXI6 227 aa14.98□□□□□ -0.01
LSM2-212ENST00000477182 ZNRF3Q9ULT6 936 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms