RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 ZNF853P0CG23 659 aa24.81■■□□□ 1.56
GMDS-204ENST00000476972 SYNE4Q8N205 404 aa24.81■■□□□ 1.56
GMDS-204ENST00000476972 TAF1DQ9H5J8 278 aaPredicted RBP24.81■■□□□ 1.56
GMDS-204ENST00000476972 IFT57Q9NWB7 429 aa24.81■■□□□ 1.56
GMDS-204ENST00000476972 HSPA1AP0DMV8 641 aaKnown RBP24.8■■□□□ 1.56
GMDS-204ENST00000476972 HSPA1BP0DMV9 641 aaKnown RBP24.8■■□□□ 1.56
GMDS-204ENST00000476972 CALD1Q05682 793 aaKnown RBP24.8■■□□□ 1.56
GMDS-204ENST00000476972 NYXQ9GZU5 481 aa24.8■■□□□ 1.56
GMDS-204ENST00000476972 ZBTB3Q9H5J0 574 aa24.8■■□□□ 1.56
GMDS-204ENST00000476972 CREBZFQ9NS37 354 aa24.8■■□□□ 1.56
GMDS-204ENST00000476972 CRY2Q49AN0 593 aa24.79■■□□□ 1.56
GMDS-204ENST00000476972 ZNF541Q9H0D2 1346 aa24.79■■□□□ 1.56
GMDS-204ENST00000476972 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
GMDS-204ENST00000476972 HOXB7P09629 217 aa24.78■■□□□ 1.56
GMDS-204ENST00000476972 GPTP24298 496 aa24.78■■□□□ 1.56
GMDS-204ENST00000476972 LDHDQ86WU2 507 aa24.78■■□□□ 1.56
GMDS-204ENST00000476972 CACNA1SQ13698 1873 aa24.77■■□□□ 1.56
GMDS-204ENST00000476972 IARSP41252 1262 aaKnown RBP24.77■■□□□ 1.56
GMDS-204ENST00000476972 GNAI1P63096 354 aa24.77■■□□□ 1.56
GMDS-204ENST00000476972 MKRN1Q9UHC7 482 aaKnown RBP24.77■■□□□ 1.56
GMDS-204ENST00000476972 ABCC12Q96J65 1359 aa24.77■■□□□ 1.56
GMDS-204ENST00000476972 ANKRD36CQ5JPF3 1778 aa24.77■■□□□ 1.56
GMDS-204ENST00000476972 ARFGEF2Q9Y6D5 1785 aa24.77■■□□□ 1.56
GMDS-204ENST00000476972 EAPPQ56P03 285 aaPredicted RBP24.76■■□□□ 1.55
GMDS-204ENST00000476972 HDGFL1Q5TGJ6 251 aa24.76■■□□□ 1.55
GMDS-204ENST00000476972 SUSD4Q5VX71 490 aa24.76■■□□□ 1.55
GMDS-204ENST00000476972 TNS4Q8IZW8 715 aa24.76■■□□□ 1.55
GMDS-204ENST00000476972 FZD9O00144 591 aa24.75■■□□□ 1.55
GMDS-204ENST00000476972 DUSP27Q5VZP5 1158 aa24.75■■□□□ 1.55
GMDS-204ENST00000476972 ZNF34Q8IZ26 560 aa24.75■■□□□ 1.55
GMDS-204ENST00000476972 DDX21Q9NR30 783 aaKnown RBP eCLIP24.75■■□□□ 1.55
GMDS-204ENST00000476972 CHPF2Q9P2E5 772 aa24.75■■□□□ 1.55
GMDS-204ENST00000476972 HACL1Q9UJ83 578 aa24.75■■□□□ 1.55
GMDS-204ENST00000476972 HOXA10P31260 410 aaPredicted RBP24.74■■□□□ 1.55
GMDS-204ENST00000476972 CCDC27Q2M243 656 aa24.74■■□□□ 1.55
GMDS-204ENST00000476972 GIGYF2Q6Y7W6 1299 aaKnown RBP24.74■■□□□ 1.55
GMDS-204ENST00000476972 PSMD1Q99460 953 aa24.74■■□□□ 1.55
GMDS-204ENST00000476972 UBN2Q6ZU65 1347 aa24.74■■□□□ 1.55
GMDS-204ENST00000476972 PASKQ96RG2 1323 aa24.74■■□□□ 1.55
GMDS-204ENST00000476972 IBTKQ9P2D0 1353 aaPredicted RBP24.73■■□□□ 1.55
GMDS-204ENST00000476972 ITGBL1O95965 494 aaPredicted RBP24.73■■□□□ 1.55
GMDS-204ENST00000476972 EPHX2P34913 555 aa24.73■■□□□ 1.55
GMDS-204ENST00000476972 CC2D2BQ6DHV5 1058 aa24.73■■□□□ 1.55
GMDS-204ENST00000476972 XAGE3Q8WTP9 111 aa24.73■■□□□ 1.55
GMDS-204ENST00000476972 RPGRQ92834 1020 aaKnown RBP24.73■■□□□ 1.55
GMDS-204ENST00000476972 CLEC11AQ9Y240 323 aa24.73■■□□□ 1.55
GMDS-204ENST00000476972 COPS6Q7L5N1 327 aa24.72■■□□□ 1.55
GMDS-204ENST00000476972 WWC1Q8IX03 1113 aa24.72■■□□□ 1.55
GMDS-204ENST00000476972 JDP2Q8WYK2 163 aa24.72■■□□□ 1.55
GMDS-204ENST00000476972 DICER1Q9UPY3 1922 aaKnown RBP24.71■■□□□ 1.55
GMDS-204ENST00000476972 CAPN15O75808 1086 aa24.71■■□□□ 1.55
GMDS-204ENST00000476972 AIMP1Q12904 312 aaKnown RBP24.71■■□□□ 1.55
GMDS-204ENST00000476972 RNF123Q5XPI4 1314 aa24.7■■□□□ 1.54
GMDS-204ENST00000476972 TCERG1O14776 1098 aaKnown RBP24.7■■□□□ 1.54
GMDS-204ENST00000476972 NTSR2O95665 410 aa24.7■■□□□ 1.54
GMDS-204ENST00000476972 C3orf67Q6ZVT6 689 aa24.7■■□□□ 1.54
GMDS-204ENST00000476972 GPC2Q8N158 579 aa24.7■■□□□ 1.54
GMDS-204ENST00000476972 RBM17Q96I25 401 aaKnown RBP24.7■■□□□ 1.54
GMDS-204ENST00000476972 PNMA8AQ86V59 439 aaPredicted RBP24.69■■□□□ 1.54
GMDS-204ENST00000476972 CRAMP1Q96RY5 1269 aa24.69■■□□□ 1.54
GMDS-204ENST00000476972 DBF4Q9UBU7 674 aaPredicted RBP24.69■■□□□ 1.54
GMDS-204ENST00000476972 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
GMDS-204ENST00000476972 TMEM88BA6NKF7 163 aa24.68■■□□□ 1.54
GMDS-204ENST00000476972 NCBP3Q53F19 620 aaKnown RBP24.68■■□□□ 1.54
GMDS-204ENST00000476972 PPP1R42Q7Z4L9 355 aa24.68■■□□□ 1.54
GMDS-204ENST00000476972 SLC51AQ86UW1 340 aa24.68■■□□□ 1.54
GMDS-204ENST00000476972 FAM9BQ8IZU0 186 aa24.68■■□□□ 1.54
GMDS-204ENST00000476972 TSR2Q969E8 191 aaKnown RBP24.68■■□□□ 1.54
GMDS-204ENST00000476972 GJA3Q9Y6H8 435 aa24.68■■□□□ 1.54
GMDS-204ENST00000476972 RIC1Q4ADV7 1423 aa24.68■■□□□ 1.54
GMDS-204ENST00000476972 ELL2O00472 640 aaPredicted RBP24.67■■□□□ 1.54
GMDS-204ENST00000476972 EIF6P56537 245 aaKnown RBP24.67■■□□□ 1.54
GMDS-204ENST00000476972 GRIPAP1Q4V328 841 aa24.67■■□□□ 1.54
GMDS-204ENST00000476972 MAP1SQ66K74 1059 aaPredicted RBP24.67■■□□□ 1.54
GMDS-204ENST00000476972 CNTROBQ8N137 903 aa24.67■■□□□ 1.54
GMDS-204ENST00000476972 C8orf58Q8NAV2 365 aa24.67■■□□□ 1.54
GMDS-204ENST00000476972 CNTNAP1P78357 1384 aa24.67■■□□□ 1.54
GMDS-204ENST00000476972 PPEF1O14829 653 aaPredicted RBP24.66■■□□□ 1.54
GMDS-204ENST00000476972 PARP10Q53GL7 1025 aa24.66■■□□□ 1.54
GMDS-204ENST00000476972 LARGE2Q8N3Y3 721 aa24.66■■□□□ 1.54
GMDS-204ENST00000476972 NLRP3Q96P20 1036 aa24.66■■□□□ 1.54
GMDS-204ENST00000476972 SLC10A5Q5PT55 438 aa24.65■■□□□ 1.54
GMDS-204ENST00000476972 UTP14AQ9BVJ6 771 aaKnown RBP24.65■■□□□ 1.54
GMDS-204ENST00000476972 HYPKQ9NX55 129 aa24.65■■□□□ 1.54
GMDS-204ENST00000476972 IL16Q14005 1332 aa24.64■■□□□ 1.54
GMDS-204ENST00000476972 VEGFBP49765 207 aa24.64■■□□□ 1.54
GMDS-204ENST00000476972 HSP90AB3PQ58FF7 597 aa24.64■■□□□ 1.54
GMDS-204ENST00000476972 SALL2Q9Y467 1007 aaPredicted RBP24.64■■□□□ 1.54
GMDS-204ENST00000476972 TSPYL6Q8N831 410 aa24.63■■□□□ 1.53
GMDS-204ENST00000476972 PLBD2Q8NHP8 589 aa24.62■■□□□ 1.53
GMDS-204ENST00000476972 TCIRG1Q13488 830 aa24.61■■□□□ 1.53
GMDS-204ENST00000476972 NLRP10Q86W26 655 aa24.61■■□□□ 1.53
GMDS-204ENST00000476972 TMX4Q9H1E5 349 aaPredicted RBP24.61■■□□□ 1.53
GMDS-204ENST00000476972 ATP6V0A2Q9Y487 856 aa24.61■■□□□ 1.53
GMDS-204ENST00000476972 FOXN1O15353 648 aa24.6■■□□□ 1.53
GMDS-204ENST00000476972 LMOD1P29536 600 aaPredicted RBP24.6■■□□□ 1.53
GMDS-204ENST00000476972 EPS15P42566 896 aa24.6■■□□□ 1.53
GMDS-204ENST00000476972 ANKRD13DQ6ZTN6 518 aa24.6■■□□□ 1.53
GMDS-204ENST00000476972 LAMB2P55268 1798 aa24.59■■□□□ 1.53
GMDS-204ENST00000476972 COL4A5P29400 1685 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms