RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 CLEC4GQ6UXB4 293 aa20.88■□□□□ 0.93
SMG5-204ENST00000476954 DLK2Q6UY11 383 aa20.88■□□□□ 0.93
SMG5-204ENST00000476954 FMNL2Q96PY5 1086 aa20.88■□□□□ 0.93
SMG5-204ENST00000476954 ADARB2Q9NS39 739 aaKnown RBP20.88■□□□□ 0.93
SMG5-204ENST00000476954 GPRC5DQ9NZD1 345 aa20.88■□□□□ 0.93
SMG5-204ENST00000476954 ABCC12Q96J65 1359 aa20.86■□□□□ 0.93
SMG5-204ENST00000476954 TCERG1O14776 1098 aaKnown RBP20.86■□□□□ 0.93
SMG5-204ENST00000476954 NOGQ13253 232 aa20.85■□□□□ 0.93
SMG5-204ENST00000476954 ZNF652Q9Y2D9 606 aa20.85■□□□□ 0.93
SMG5-204ENST00000476954 HIRAP54198 1017 aaPredicted RBP20.84■□□□□ 0.93
SMG5-204ENST00000476954 NIM1KQ8IY84 436 aa20.84■□□□□ 0.93
SMG5-204ENST00000476954 GMPSP49915 693 aaPredicted RBP20.83■□□□□ 0.93
SMG5-204ENST00000476954 HUNKP57058 714 aa20.83■□□□□ 0.93
SMG5-204ENST00000476954 HLFQ16534 295 aa20.83■□□□□ 0.93
SMG5-204ENST00000476954 CRY2Q49AN0 593 aa20.83■□□□□ 0.93
SMG5-204ENST00000476954 NUTM1Q86Y26 1132 aa20.83■□□□□ 0.93
SMG5-204ENST00000476954 PGAP2Q9UHJ9 254 aa20.83■□□□□ 0.93
SMG5-204ENST00000476954 NPC1L1Q9UHC9 1359 aa20.83■□□□□ 0.92
SMG5-204ENST00000476954 NBPF26B4DH59 902 aa20.82■□□□□ 0.92
SMG5-204ENST00000476954 GTF2E1P29083 439 aaPredicted RBP20.82■□□□□ 0.92
SMG5-204ENST00000476954 CXCL9Q07325 125 aa20.82■□□□□ 0.92
SMG5-204ENST00000476954 CC2D2BQ6DHV5 1058 aa20.82■□□□□ 0.92
SMG5-204ENST00000476954 NBPF10Q6P3W6 841 aaKnown RBP20.82■□□□□ 0.92
SMG5-204ENST00000476954 NBPF15Q8N660 670 aa20.82■□□□□ 0.92
SMG5-204ENST00000476954 AKAP11Q9UKA4 1901 aa20.82■□□□□ 0.92
SMG5-204ENST00000476954 SHTN1A0MZ66 631 aa20.81■□□□□ 0.92
SMG5-204ENST00000476954 FAM155AB1AL88 458 aaPredicted RBP20.81■□□□□ 0.92
SMG5-204ENST00000476954 PPIP5K2O43314 1243 aa20.81■□□□□ 0.92
SMG5-204ENST00000476954 TRPA1O75762 1119 aa20.81■□□□□ 0.92
SMG5-204ENST00000476954 AOC3Q16853 763 aa20.81■□□□□ 0.92
SMG5-204ENST00000476954 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
SMG5-204ENST00000476954 GNAT3A8MTJ3 354 aa20.8■□□□□ 0.92
SMG5-204ENST00000476954 KIF23Q02241 960 aaPredicted RBP20.8■□□□□ 0.92
SMG5-204ENST00000476954 RNF186Q9NXI6 227 aa20.8■□□□□ 0.92
SMG5-204ENST00000476954 USP48Q86UV5 1035 aa20.79■□□□□ 0.92
SMG5-204ENST00000476954 POLR2AP24928 1970 aaKnown RBP20.79■□□□□ 0.92
SMG5-204ENST00000476954 BTBD11A6QL63 1104 aa20.78■□□□□ 0.92
SMG5-204ENST00000476954 CDC37L1Q7L3B6 337 aa20.78■□□□□ 0.92
SMG5-204ENST00000476954 SAGE1Q9NXZ1 904 aa20.78■□□□□ 0.92
SMG5-204ENST00000476954 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
SMG5-204ENST00000476954 HOXA10P31260 410 aaPredicted RBP20.77■□□□□ 0.92
SMG5-204ENST00000476954 RGMBQ6NW40 437 aa20.77■□□□□ 0.92
SMG5-204ENST00000476954 CTU1Q7Z7A3 348 aaKnown RBP20.77■□□□□ 0.92
SMG5-204ENST00000476954 RPGRQ92834 1020 aaKnown RBP20.77■□□□□ 0.92
SMG5-204ENST00000476954 HPS5Q9UPZ3 1129 aa20.77■□□□□ 0.92
SMG5-204ENST00000476954 NUP98P52948 1817 aa20.76■□□□□ 0.91
SMG5-204ENST00000476954 C3orf67Q6ZVT6 689 aa20.76■□□□□ 0.91
SMG5-204ENST00000476954 ZNRF3Q9ULT6 936 aa20.76■□□□□ 0.91
SMG5-204ENST00000476954 CEMIPQ8WUJ3 1361 aa20.75■□□□□ 0.91
SMG5-204ENST00000476954 DIAPH1O60610 1272 aaKnown RBP20.75■□□□□ 0.91
SMG5-204ENST00000476954 ZC3H15Q8WU90 426 aaKnown RBP20.75■□□□□ 0.91
SMG5-204ENST00000476954 RIC1Q4ADV7 1423 aa20.75■□□□□ 0.91
SMG5-204ENST00000476954 RAD17O75943 681 aa20.74■□□□□ 0.91
SMG5-204ENST00000476954 BCL2L13Q9BXK5 485 aa20.74■□□□□ 0.91
SMG5-204ENST00000476954 KNSTRNQ9Y448 316 aa20.73■□□□□ 0.91
SMG5-204ENST00000476954 RGL2O15211 777 aa20.72■□□□□ 0.91
SMG5-204ENST00000476954 SNRPA1P09661 255 aaKnown RBP20.72■□□□□ 0.91
SMG5-204ENST00000476954 GRIPAP1Q4V328 841 aa20.72■□□□□ 0.91
SMG5-204ENST00000476954 HABP4Q5JVS0 413 aaKnown RBP20.72■□□□□ 0.91
SMG5-204ENST00000476954 GAS2L2Q8NHY3 880 aa20.72■□□□□ 0.91
SMG5-204ENST00000476954 CRAMP1Q96RY5 1269 aa20.72■□□□□ 0.91
SMG5-204ENST00000476954 CSRNP1Q96S65 589 aa20.72■□□□□ 0.91
SMG5-204ENST00000476954 ZNF157P51786 506 aaPredicted RBP20.71■□□□□ 0.91
SMG5-204ENST00000476954 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
SMG5-204ENST00000476954 NGEFQ8N5V2 710 aa20.71■□□□□ 0.91
SMG5-204ENST00000476954 RBM17Q96I25 401 aaKnown RBP20.71■□□□□ 0.91
SMG5-204ENST00000476954 GBA2Q9HCG7 927 aaPredicted RBP20.71■□□□□ 0.91
SMG5-204ENST00000476954 CNOT7Q9UIV1 285 aaKnown RBP20.71■□□□□ 0.91
SMG5-204ENST00000476954 KIF7Q2M1P5 1343 aa20.71■□□□□ 0.91
SMG5-204ENST00000476954 GPTP24298 496 aa20.7■□□□□ 0.9
SMG5-204ENST00000476954 CCDC102AQ96A19 550 aa20.7■□□□□ 0.9
SMG5-204ENST00000476954 NYXQ9GZU5 481 aa20.7■□□□□ 0.9
SMG5-204ENST00000476954 ADM5C9JUS6 153 aa20.69■□□□□ 0.9
SMG5-204ENST00000476954 SAMD7Q7Z3H4 446 aa20.69■□□□□ 0.9
SMG5-204ENST00000476954 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
SMG5-204ENST00000476954 CDHR2Q9BYE9 1310 aa20.69■□□□□ 0.9
SMG5-204ENST00000476954 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
SMG5-204ENST00000476954 U2SURPO15042 1029 aaKnown RBP20.68■□□□□ 0.9
SMG5-204ENST00000476954 EGFRP00533 1210 aa20.68■□□□□ 0.9
SMG5-204ENST00000476954 SUSD4Q5VX71 490 aa20.68■□□□□ 0.9
SMG5-204ENST00000476954 MICALL2Q8IY33 904 aa20.68■□□□□ 0.9
SMG5-204ENST00000476954 GCC1Q96CN9 775 aa20.68■□□□□ 0.9
SMG5-204ENST00000476954 PHACTR3Q96KR7 559 aa20.68■□□□□ 0.9
SMG5-204ENST00000476954 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
SMG5-204ENST00000476954 YDJCA8MPS7 323 aa20.67■□□□□ 0.9
SMG5-204ENST00000476954 KRT26Q7Z3Y9 468 aa20.67■□□□□ 0.9
SMG5-204ENST00000476954 C2orf69Q8N8R5 385 aa20.67■□□□□ 0.9
SMG5-204ENST00000476954 ZBTB12Q9Y330 459 aaPredicted RBP20.67■□□□□ 0.9
SMG5-204ENST00000476954 SLC10A3P09131 477 aa20.66■□□□□ 0.9
SMG5-204ENST00000476954 HSPA5P11021 654 aaKnown RBP20.66■□□□□ 0.9
SMG5-204ENST00000476954 TBC1D10BQ4KMP7 808 aaPredicted RBP20.66■□□□□ 0.9
SMG5-204ENST00000476954 RTFDC1Q9BY42 306 aaPredicted RBP20.66■□□□□ 0.9
SMG5-204ENST00000476954 VPS33BQ9H267 617 aa20.66■□□□□ 0.9
SMG5-204ENST00000476954 LAMB4A4D0S4 1761 aa20.65■□□□□ 0.9
SMG5-204ENST00000476954 TNIP1Q15025 636 aa20.65■□□□□ 0.9
SMG5-204ENST00000476954 TTLL7Q6ZT98 887 aa20.65■□□□□ 0.9
SMG5-204ENST00000476954 H7C1D1 291 aa20.64■□□□□ 0.89
SMG5-204ENST00000476954 NTSR2O95665 410 aa20.64■□□□□ 0.89
SMG5-204ENST00000476954 KIAA2012Q0VF49 1180 aa20.64■□□□□ 0.89
SMG5-204ENST00000476954 MCM10Q7L590 875 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms