RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 RNF123Q5XPI4 1314 aa22.74■■□□□ 1.23
SMIM4-202ENST00000476842 ADCY9O60503 1353 aa22.74■■□□□ 1.23
SMIM4-202ENST00000476842 TRMT112Q9UI30 125 aaKnown RBP22.73■■□□□ 1.23
SMIM4-202ENST00000476842 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
SMIM4-202ENST00000476842 CCDC191Q8NCU4 936 aa22.72■■□□□ 1.23
SMIM4-202ENST00000476842 YBX3P16989 372 aaKnown RBP eCLIP22.71■■□□□ 1.23
SMIM4-202ENST00000476842 NEXNQ0ZGT2 675 aa22.71■■□□□ 1.23
SMIM4-202ENST00000476842 DNAAF4Q8WXU2 420 aa22.71■■□□□ 1.23
SMIM4-202ENST00000476842 GRIN3BO60391 1043 aa22.7■■□□□ 1.22
SMIM4-202ENST00000476842 SRGNP10124 158 aa22.7■■□□□ 1.22
SMIM4-202ENST00000476842 WWC3Q9ULE0 1092 aa22.7■■□□□ 1.22
SMIM4-202ENST00000476842 ABCC12Q96J65 1359 aa22.69■■□□□ 1.22
SMIM4-202ENST00000476842 SH3TC1Q8TE82 1336 aa22.69■■□□□ 1.22
SMIM4-202ENST00000476842 IGKV5-2P06315 115 aa22.69■■□□□ 1.22
SMIM4-202ENST00000476842 DALRD3Q5D0E6 543 aaKnown RBP22.69■■□□□ 1.22
SMIM4-202ENST00000476842 CWC25Q9NXE8 425 aaPredicted RBP22.69■■□□□ 1.22
SMIM4-202ENST00000476842 BCS1LQ9Y276 419 aa22.69■■□□□ 1.22
SMIM4-202ENST00000476842 RARSP54136 660 aaKnown RBP22.68■■□□□ 1.22
SMIM4-202ENST00000476842 BRPF1P55201 1214 aaPredicted RBP22.68■■□□□ 1.22
SMIM4-202ENST00000476842 STYK1Q6J9G0 422 aa22.68■■□□□ 1.22
SMIM4-202ENST00000476842 SYNE4Q8N205 404 aa22.68■■□□□ 1.22
SMIM4-202ENST00000476842 TTLL6Q8N841 843 aa22.68■■□□□ 1.22
SMIM4-202ENST00000476842 ZNF622Q969S3 477 aaKnown RBP eCLIP22.68■■□□□ 1.22
SMIM4-202ENST00000476842 FAM89AQ96GI7 184 aa22.68■■□□□ 1.22
SMIM4-202ENST00000476842 MASTLQ96GX5 879 aa22.68■■□□□ 1.22
SMIM4-202ENST00000476842 SMC4Q9NTJ3 1288 aa22.68■■□□□ 1.22
SMIM4-202ENST00000476842 KIAA1551Q9HCM1 1747 aa22.68■■□□□ 1.22
SMIM4-202ENST00000476842 RIC1Q4ADV7 1423 aa22.67■■□□□ 1.22
SMIM4-202ENST00000476842 F6X3S4 739 aa22.67■■□□□ 1.22
SMIM4-202ENST00000476842 NPR1P16066 1061 aa22.67■■□□□ 1.22
SMIM4-202ENST00000476842 CRY2Q49AN0 593 aa22.67■■□□□ 1.22
SMIM4-202ENST00000476842 ZBTB38Q8NAP3 1195 aaPredicted RBP22.67■■□□□ 1.22
SMIM4-202ENST00000476842 NLRP3Q96P20 1036 aa22.67■■□□□ 1.22
SMIM4-202ENST00000476842 BCL2L13Q9BXK5 485 aa22.67■■□□□ 1.22
SMIM4-202ENST00000476842 PTPRCP08575 1304 aa22.66■■□□□ 1.22
SMIM4-202ENST00000476842 NEURL1BA8MQ27 555 aa22.66■■□□□ 1.22
SMIM4-202ENST00000476842 LINS1Q8NG48 757 aa22.66■■□□□ 1.22
SMIM4-202ENST00000476842 CNKSR1Q969H4 720 aa22.66■■□□□ 1.22
SMIM4-202ENST00000476842 PCCAP05165 728 aaPredicted RBP22.65■■□□□ 1.22
SMIM4-202ENST00000476842 HCLS1P14317 486 aaPredicted RBP22.65■■□□□ 1.22
SMIM4-202ENST00000476842 CWF19L2Q2TBE0 894 aaKnown RBP22.65■■□□□ 1.22
SMIM4-202ENST00000476842 N4BP2Q86UW6 1770 aaPredicted RBP22.64■■□□□ 1.22
SMIM4-202ENST00000476842 ARFGEF2Q9Y6D5 1785 aa22.64■■□□□ 1.22
SMIM4-202ENST00000476842 BEND3Q5T5X7 828 aa22.64■■□□□ 1.21
SMIM4-202ENST00000476842 CACNA1FO60840 1977 aa22.63■■□□□ 1.21
SMIM4-202ENST00000476842 HSP90B1P14625 803 aaKnown RBP22.63■■□□□ 1.21
SMIM4-202ENST00000476842 ALDH1B1P30837 517 aa22.63■■□□□ 1.21
SMIM4-202ENST00000476842 HOXA10P31260 410 aaPredicted RBP22.63■■□□□ 1.21
SMIM4-202ENST00000476842 RTL5Q5HYW3 569 aaPredicted RBP22.63■■□□□ 1.21
SMIM4-202ENST00000476842 C3orf67Q6ZVT6 689 aa22.63■■□□□ 1.21
SMIM4-202ENST00000476842 ANKRD36CQ5JPF3 1778 aa22.63■■□□□ 1.21
SMIM4-202ENST00000476842 ANKRD31Q8N7Z5 1873 aa22.62■■□□□ 1.21
SMIM4-202ENST00000476842 IRS4O14654 1257 aaPredicted RBP22.62■■□□□ 1.21
SMIM4-202ENST00000476842 GCKRQ14397 625 aa22.62■■□□□ 1.21
SMIM4-202ENST00000476842 GOLGB1Q14789 3259 aaKnown RBP22.62■■□□□ 1.21
SMIM4-202ENST00000476842 H7C1W4 665 aa22.61■■□□□ 1.21
SMIM4-202ENST00000476842 RPGRQ92834 1020 aaKnown RBP22.61■■□□□ 1.21
SMIM4-202ENST00000476842 NOB1Q9ULX3 412 aaKnown RBP22.61■■□□□ 1.21
SMIM4-202ENST00000476842 SF3B3Q15393 1217 aaKnown RBP22.6■■□□□ 1.21
SMIM4-202ENST00000476842 SLC4A10Q6U841 1118 aa22.6■■□□□ 1.21
SMIM4-202ENST00000476842 RBM17Q96I25 401 aaKnown RBP22.6■■□□□ 1.21
SMIM4-202ENST00000476842 CRAMP1Q96RY5 1269 aa22.6■■□□□ 1.21
SMIM4-202ENST00000476842 CDHR2Q9BYE9 1310 aa22.59■■□□□ 1.21
SMIM4-202ENST00000476842 ALDH1L1O75891 902 aa22.59■■□□□ 1.21
SMIM4-202ENST00000476842 PRPF40BQ6NWY9 871 aaKnown RBP22.59■■□□□ 1.21
SMIM4-202ENST00000476842 JARID2Q92833 1246 aaPredicted RBP22.59■■□□□ 1.21
SMIM4-202ENST00000476842 SRCIN1Q9C0H9 1055 aa22.59■■□□□ 1.21
SMIM4-202ENST00000476842 UTRNP46939 3433 aa22.58■■□□□ 1.21
SMIM4-202ENST00000476842 PDE8AO60658 829 aa22.58■■□□□ 1.21
SMIM4-202ENST00000476842 ARHGAP27Q6ZUM4 889 aa22.58■■□□□ 1.21
SMIM4-202ENST00000476842 ARHGAP45Q92619 1136 aa22.58■■□□□ 1.21
SMIM4-202ENST00000476842 BCAR3O75815 825 aa22.57■■□□□ 1.2
SMIM4-202ENST00000476842 C7orf43Q8WVR3 580 aa22.57■■□□□ 1.2
SMIM4-202ENST00000476842 API5Q9BZZ5 524 aaKnown RBP22.57■■□□□ 1.2
SMIM4-202ENST00000476842 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
SMIM4-202ENST00000476842 C21orf2O43822 256 aa22.56■■□□□ 1.2
SMIM4-202ENST00000476842 CASP7P55210 303 aa22.56■■□□□ 1.2
SMIM4-202ENST00000476842 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
SMIM4-202ENST00000476842 DDX46Q7L014 1031 aaKnown RBP22.55■■□□□ 1.2
SMIM4-202ENST00000476842 UBE3BQ7Z3V4 1068 aa22.55■■□□□ 1.2
SMIM4-202ENST00000476842 TNRC6CQ9HCJ0 1690 aaKnown RBP22.55■■□□□ 1.2
SMIM4-202ENST00000476842 BRCA1P38398 1863 aaKnown RBP22.54■■□□□ 1.2
SMIM4-202ENST00000476842 SOGA3Q5TF21 947 aa22.54■■□□□ 1.2
SMIM4-202ENST00000476842 PLA2G12BQ9BX93 195 aa22.54■■□□□ 1.2
SMIM4-202ENST00000476842 ZNF219Q9P2Y4 722 aaPredicted RBP22.54■■□□□ 1.2
SMIM4-202ENST00000476842 COL11A2P13942 1736 aaPredicted RBP22.54■■□□□ 1.2
SMIM4-202ENST00000476842 DLEC1Q9Y238 1755 aa22.53■■□□□ 1.2
SMIM4-202ENST00000476842 BBOX1O75936 387 aa22.53■■□□□ 1.2
SMIM4-202ENST00000476842 GRM8O00222 908 aa22.52■■□□□ 1.2
SMIM4-202ENST00000476842 C9orf78Q9NZ63 289 aaPredicted RBP22.52■■□□□ 1.2
SMIM4-202ENST00000476842 ABCC4O15439 1325 aa22.52■■□□□ 1.2
SMIM4-202ENST00000476842 CCT4P50991 539 aaKnown RBP22.51■■□□□ 1.19
SMIM4-202ENST00000476842 GRAPQ13588 217 aa22.51■■□□□ 1.19
SMIM4-202ENST00000476842 CCDC152Q4G0S7 254 aa22.51■■□□□ 1.19
SMIM4-202ENST00000476842 TTLL11Q8NHH1 800 aa22.51■■□□□ 1.19
SMIM4-202ENST00000476842 GRAPLQ8TC17 118 aaPredicted RBP22.51■■□□□ 1.19
SMIM4-202ENST00000476842 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
SMIM4-202ENST00000476842 CTSWP56202 376 aa22.5■■□□□ 1.19
SMIM4-202ENST00000476842 CC2D2BQ6DHV5 1058 aa22.5■■□□□ 1.19
SMIM4-202ENST00000476842 ATF7IPQ6VMQ6 1270 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms