RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 INPP5BP32019 993 aa12.25□□□□□ -0.45
SMC5-203ENST00000475540 SCNN1AP37088 669 aa12.25□□□□□ -0.45
SMC5-203ENST00000475540 ARSDP51689 593 aa12.25□□□□□ -0.45
SMC5-203ENST00000475540 NEUROD1Q13562 356 aa12.25□□□□□ -0.45
SMC5-203ENST00000475540 TREML1Q86YW5 311 aa12.25□□□□□ -0.45
SMC5-203ENST00000475540 AVENQ9NQS1 362 aaPredicted RBP12.25□□□□□ -0.45
SMC5-203ENST00000475540 STIM2Q9P246 746 aa12.25□□□□□ -0.45
SMC5-203ENST00000475540 SPEM2Q0P670 501 aa12.24□□□□□ -0.45
SMC5-203ENST00000475540 PHLDB3Q6NSJ2 640 aa12.24□□□□□ -0.45
SMC5-203ENST00000475540 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
SMC5-203ENST00000475540 GGA1Q9UJY5 639 aa12.24□□□□□ -0.45
SMC5-203ENST00000475540 DNMT3AQ9Y6K1 912 aaPredicted RBP12.24□□□□□ -0.45
SMC5-203ENST00000475540 ADH6P28332 368 aa12.23□□□□□ -0.45
SMC5-203ENST00000475540 GRIN2CQ14957 1233 aa12.23□□□□□ -0.45
SMC5-203ENST00000475540 ZNF468Q5VIY5 522 aaPredicted RBP12.23□□□□□ -0.45
SMC5-203ENST00000475540 SLC30A3Q99726 388 aa12.23□□□□□ -0.45
SMC5-203ENST00000475540 NEURL1BA8MQ27 555 aa12.22□□□□□ -0.45
SMC5-203ENST00000475540 OIP5O43482 229 aa12.22□□□□□ -0.45
SMC5-203ENST00000475540 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
SMC5-203ENST00000475540 GALNT6Q8NCL4 622 aa12.22□□□□□ -0.45
SMC5-203ENST00000475540 TNFRSF10BO14763 440 aa12.21□□□□□ -0.45
SMC5-203ENST00000475540 OPLAHO14841 1288 aa12.21□□□□□ -0.45
SMC5-203ENST00000475540 SYT9Q86SS6 491 aa12.21□□□□□ -0.45
SMC5-203ENST00000475540 ETFBKMTQ8IXQ9 262 aa12.21□□□□□ -0.45
SMC5-203ENST00000475540 ABTB2Q8N961 1025 aa12.21□□□□□ -0.45
SMC5-203ENST00000475540 GTF3C2Q8WUA4 911 aaPredicted RBP12.21□□□□□ -0.45
SMC5-203ENST00000475540 ARHGEF15O94989 841 aa12.2□□□□□ -0.46
SMC5-203ENST00000475540 NEDD1Q8NHV4 660 aa12.2□□□□□ -0.46
SMC5-203ENST00000475540 EDARADDQ8WWZ3 215 aa12.2□□□□□ -0.46
SMC5-203ENST00000475540 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
SMC5-203ENST00000475540 C11orf16Q9NQ32 467 aa12.2□□□□□ -0.46
SMC5-203ENST00000475540 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
SMC5-203ENST00000475540 ARID4AP29374 1257 aaPredicted RBP12.19□□□□□ -0.46
SMC5-203ENST00000475540 CCINQ13939 588 aa12.19□□□□□ -0.46
SMC5-203ENST00000475540 SLCO4C1Q6ZQN7 724 aa12.19□□□□□ -0.46
SMC5-203ENST00000475540 HELQQ8TDG4 1101 aa12.19□□□□□ -0.46
SMC5-203ENST00000475540 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
SMC5-203ENST00000475540 KLF15Q9UIH9 416 aa12.19□□□□□ -0.46
SMC5-203ENST00000475540 RGL4Q8IZJ4 473 aa12.18□□□□□ -0.46
SMC5-203ENST00000475540 CMTR1Q8N1G2 835 aaKnown RBP12.18□□□□□ -0.46
SMC5-203ENST00000475540 BHMTQ93088 406 aa12.18□□□□□ -0.46
SMC5-203ENST00000475540 GSX2Q9BZM3 304 aa12.18□□□□□ -0.46
SMC5-203ENST00000475540 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
SMC5-203ENST00000475540 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
SMC5-203ENST00000475540 SIN3BO75182 1162 aa12.17□□□□□ -0.46
SMC5-203ENST00000475540 FAM26DQ5JW98 314 aa12.17□□□□□ -0.46
SMC5-203ENST00000475540 C1orf229Q6ZS94 237 aaPredicted RBP12.17□□□□□ -0.46
SMC5-203ENST00000475540 RAB44Q7Z6P3 723 aaPredicted RBP12.17□□□□□ -0.46
SMC5-203ENST00000475540 ZAP70P43403 619 aa12.16□□□□□ -0.46
SMC5-203ENST00000475540 PIK3R5Q8WYR1 880 aa12.16□□□□□ -0.46
SMC5-203ENST00000475540 USP20Q9Y2K6 914 aa12.16□□□□□ -0.46
SMC5-203ENST00000475540 ABL1P00519 1130 aa12.15□□□□□ -0.46
SMC5-203ENST00000475540 EPXP11678 715 aa12.15□□□□□ -0.46
SMC5-203ENST00000475540 GRNP28799 593 aaKnown RBP12.15□□□□□ -0.46
SMC5-203ENST00000475540 MARSP56192 900 aaKnown RBP12.15□□□□□ -0.46
SMC5-203ENST00000475540 ZBTB39O15060 712 aa12.14□□□□□ -0.47
SMC5-203ENST00000475540 ALAS2P22557 587 aa12.14□□□□□ -0.47
SMC5-203ENST00000475540 FCHSD1Q86WN1 690 aa12.14□□□□□ -0.47
SMC5-203ENST00000475540 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.14□□□□□ -0.47
SMC5-203ENST00000475540 AMPD1P23109 780 aa12.13□□□□□ -0.47
SMC5-203ENST00000475540 FKBP4Q02790 459 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMC5-203ENST00000475540 NOM1Q5C9Z4 860 aaKnown RBP12.13□□□□□ -0.47
SMC5-203ENST00000475540 SHISA8B8ZZ34 492 aa12.12□□□□□ -0.47
SMC5-203ENST00000475540 XYLBO75191 536 aa12.12□□□□□ -0.47
SMC5-203ENST00000475540 SF3B2Q13435 895 aaKnown RBP12.12□□□□□ -0.47
SMC5-203ENST00000475540 BTBD6Q96KE9 485 aa12.12□□□□□ -0.47
SMC5-203ENST00000475540 ELOA3CA0A087WX78 387 aaPredicted RBP12.11□□□□□ -0.47
SMC5-203ENST00000475540 ELOA3DA6NLF2 546 aaPredicted RBP12.11□□□□□ -0.47
SMC5-203ENST00000475540 EGFRP00533 1210 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 NFKB1P19838 968 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 MTMR3Q13615 1198 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 ELOA3BQ3SY89 546 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 ALKBH2Q6NS38 261 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 ELOA3Q8NG57 546 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 GPR152Q8TDT2 470 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 TNFRSF25Q93038 417 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 IGFLR1Q9H665 355 aa12.11□□□□□ -0.47
SMC5-203ENST00000475540 FNDC3AQ9Y2H6 1198 aaKnown RBP12.11□□□□□ -0.47
SMC5-203ENST00000475540 ADARB2-AS1A8MUL3 147 aa12.1□□□□□ -0.47
SMC5-203ENST00000475540 SASH3O75995 380 aa12.1□□□□□ -0.47
SMC5-203ENST00000475540 FAM13AO94988 1023 aa12.1□□□□□ -0.47
SMC5-203ENST00000475540 BRD1O95696 1058 aa12.1□□□□□ -0.47
SMC5-203ENST00000475540 MPSTP25325 297 aa12.1□□□□□ -0.47
SMC5-203ENST00000475540 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
SMC5-203ENST00000475540 AAMPQ13685 434 aa12.1□□□□□ -0.47
SMC5-203ENST00000475540 ANO2Q9NQ90 1003 aa12.1□□□□□ -0.47
SMC5-203ENST00000475540 KCNMB2Q9Y691 235 aa12.1□□□□□ -0.47
SMC5-203ENST00000475540 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
SMC5-203ENST00000475540 UBE2OQ9C0C9 1292 aaKnown RBP12.09□□□□□ -0.47
SMC5-203ENST00000475540 RRAGCQ9HB90 399 aa12.09□□□□□ -0.47
SMC5-203ENST00000475540 EGFL7Q9UHF1 273 aa12.09□□□□□ -0.47
SMC5-203ENST00000475540 RARAP10276 462 aa12.08□□□□□ -0.48
SMC5-203ENST00000475540 NPR3P17342 541 aa12.08□□□□□ -0.48
SMC5-203ENST00000475540 EIF1AXP47813 144 aaKnown RBP12.08□□□□□ -0.48
SMC5-203ENST00000475540 TBC1D8BQ0IIM8 1120 aa12.08□□□□□ -0.48
SMC5-203ENST00000475540 ZNF211Q13398 564 aaPredicted RBP12.08□□□□□ -0.48
SMC5-203ENST00000475540 ATCAYQ86WG3 371 aa12.08□□□□□ -0.48
SMC5-203ENST00000475540 SCARF2Q96GP6 870 aaPredicted RBP12.08□□□□□ -0.48
SMC5-203ENST00000475540 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms