RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 NEUROD1Q13562 356 aa9.42□□□□□ -0.9
LTN1-204ENST00000475344 CHSY3Q70JA7 882 aa9.42□□□□□ -0.9
LTN1-204ENST00000475344 BHMTQ93088 406 aa9.42□□□□□ -0.9
LTN1-204ENST00000475344 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
LTN1-204ENST00000475344 BCS1LQ9Y276 419 aa9.42□□□□□ -0.9
LTN1-204ENST00000475344 TGFBR3LH3BV60 316 aa9.41□□□□□ -0.9
LTN1-204ENST00000475344 TBC1D8BQ0IIM8 1120 aa9.41□□□□□ -0.9
LTN1-204ENST00000475344 TMEM164Q5U3C3 297 aa9.41□□□□□ -0.9
LTN1-204ENST00000475344 MKNK1Q9BUB5 465 aa9.41□□□□□ -0.9
LTN1-204ENST00000475344 ALAS2P22557 587 aa9.4□□□□□ -0.9
LTN1-204ENST00000475344 IGFLR1Q9H665 355 aa9.4□□□□□ -0.9
LTN1-204ENST00000475344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.4□□□□□ -0.9
LTN1-204ENST00000475344 KCNQ4P56696 695 aa9.39□□□□□ -0.91
LTN1-204ENST00000475344 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
LTN1-204ENST00000475344 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
LTN1-204ENST00000475344 ELOA3DA6NLF2 546 aaPredicted RBP9.38□□□□□ -0.91
LTN1-204ENST00000475344 IDH3AP50213 366 aa9.38□□□□□ -0.91
LTN1-204ENST00000475344 C11orf91Q3C1V1 193 aa9.38□□□□□ -0.91
LTN1-204ENST00000475344 ELOA3BQ3SY89 546 aa9.38□□□□□ -0.91
LTN1-204ENST00000475344 IER5Q5VY09 327 aa9.38□□□□□ -0.91
LTN1-204ENST00000475344 ELOA3Q8NG57 546 aa9.38□□□□□ -0.91
LTN1-204ENST00000475344 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
LTN1-204ENST00000475344 SIN3BO75182 1162 aa9.37□□□□□ -0.91
LTN1-204ENST00000475344 EPB42P16452 691 aa9.37□□□□□ -0.91
LTN1-204ENST00000475344 C1orf115Q9H7X2 142 aa9.37□□□□□ -0.91
LTN1-204ENST00000475344 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
LTN1-204ENST00000475344 HOXB4P17483 251 aaPredicted RBP9.36□□□□□ -0.91
LTN1-204ENST00000475344 DGKGP49619 791 aa9.36□□□□□ -0.91
LTN1-204ENST00000475344 NAA30Q147X3 362 aaPredicted RBP9.36□□□□□ -0.91
LTN1-204ENST00000475344 OCLNQ16625 522 aa9.36□□□□□ -0.91
LTN1-204ENST00000475344 GPAT2Q6NUI2 795 aa9.36□□□□□ -0.91
LTN1-204ENST00000475344 MYO19Q96H55 970 aa9.36□□□□□ -0.91
LTN1-204ENST00000475344 DCAF5Q96JK2 942 aa9.36□□□□□ -0.91
LTN1-204ENST00000475344 UBE2OQ9C0C9 1292 aaKnown RBP9.36□□□□□ -0.91
LTN1-204ENST00000475344 SUV39H2Q9H5I1 410 aa9.36□□□□□ -0.91
LTN1-204ENST00000475344 DMGDHQ9UI17 866 aaKnown RBP9.36□□□□□ -0.91
LTN1-204ENST00000475344 GNB5O14775 395 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 MICAL2O94851 1124 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 ADH7P40394 386 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 ARSDP51689 593 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 COX20Q5RI15 118 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 LINC00114Q6XXX2 140 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 KRT25Q7Z3Z0 450 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 IFT43Q96FT9 208 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 CXXC1Q9P0U4 656 aaPredicted RBP9.35□□□□□ -0.91
LTN1-204ENST00000475344 USP20Q9Y2K6 914 aa9.35□□□□□ -0.91
LTN1-204ENST00000475344 PIK3R2O00459 728 aa9.34□□□□□ -0.91
LTN1-204ENST00000475344 CCINQ13939 588 aa9.34□□□□□ -0.91
LTN1-204ENST00000475344 CAPN12Q6ZSI9 719 aa9.34□□□□□ -0.91
LTN1-204ENST00000475344 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
LTN1-204ENST00000475344 SAP130Q9H0E3 1048 aa9.34□□□□□ -0.91
LTN1-204ENST00000475344 NFKB1P19838 968 aa9.33□□□□□ -0.92
LTN1-204ENST00000475344 INPP5BP32019 993 aa9.33□□□□□ -0.92
LTN1-204ENST00000475344 TREML1Q86YW5 311 aa9.33□□□□□ -0.92
LTN1-204ENST00000475344 GSX2Q9BZM3 304 aa9.33□□□□□ -0.92
LTN1-204ENST00000475344 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.33□□□□□ -0.92
LTN1-204ENST00000475344 ADARB2-AS1A8MUL3 147 aa9.32□□□□□ -0.92
LTN1-204ENST00000475344 M0R082 166 aa9.32□□□□□ -0.92
LTN1-204ENST00000475344 COL8A1P27658 744 aa9.32□□□□□ -0.92
LTN1-204ENST00000475344 C16orf46Q6P387 395 aa9.32□□□□□ -0.92
LTN1-204ENST00000475344 RGL4Q8IZJ4 473 aa9.32□□□□□ -0.92
LTN1-204ENST00000475344 ZNF417Q8TAU3 575 aa9.32□□□□□ -0.92
LTN1-204ENST00000475344 CLP1Q92989 425 aaKnown RBP9.32□□□□□ -0.92
LTN1-204ENST00000475344 ZNF587Q96SQ5 575 aaPredicted RBP9.32□□□□□ -0.92
LTN1-204ENST00000475344 GRNP28799 593 aaKnown RBP9.31□□□□□ -0.92
LTN1-204ENST00000475344 C8orf86Q6ZUL3 223 aa9.31□□□□□ -0.92
LTN1-204ENST00000475344 CMTR1Q8N1G2 835 aaKnown RBP9.31□□□□□ -0.92
LTN1-204ENST00000475344 ATP2B4P23634 1241 aa9.3□□□□□ -0.92
LTN1-204ENST00000475344 NOP53Q9NZM5 478 aaKnown RBP9.3□□□□□ -0.92
LTN1-204ENST00000475344 SLAIN2Q9P270 581 aa9.3□□□□□ -0.92
LTN1-204ENST00000475344 PTCD1O75127 700 aaKnown RBP9.29□□□□□ -0.92
LTN1-204ENST00000475344 SASH3O75995 380 aa9.29□□□□□ -0.92
LTN1-204ENST00000475344 ALBP02768 609 aa9.29□□□□□ -0.92
LTN1-204ENST00000475344 BRD2P25440 801 aaKnown RBP9.29□□□□□ -0.92
LTN1-204ENST00000475344 TARSP26639 723 aaKnown RBP9.29□□□□□ -0.92
LTN1-204ENST00000475344 PLA2G4EQ3MJ16 856 aa9.29□□□□□ -0.92
LTN1-204ENST00000475344 MDFIQ99750 246 aa9.29□□□□□ -0.92
LTN1-204ENST00000475344 ARID3AQ99856 593 aa9.29□□□□□ -0.92
LTN1-204ENST00000475344 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
LTN1-204ENST00000475344 RTCBQ9Y3I0 505 aaKnown RBP9.29□□□□□ -0.92
LTN1-204ENST00000475344 STARD13Q9Y3M8 1113 aa9.29□□□□□ -0.92
LTN1-204ENST00000475344 RARAP10276 462 aa9.28□□□□□ -0.92
LTN1-204ENST00000475344 ETFBKMTQ8IXQ9 262 aa9.28□□□□□ -0.92
LTN1-204ENST00000475344 NUDT8Q8WV74 236 aa9.28□□□□□ -0.92
LTN1-204ENST00000475344 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
LTN1-204ENST00000475344 DNAJB12Q9NXW2 375 aaKnown RBP9.28□□□□□ -0.92
LTN1-204ENST00000475344 SLC6A14Q9UN76 642 aa9.28□□□□□ -0.92
LTN1-204ENST00000475344 KRBA1A5PL33 1030 aa9.27□□□□□ -0.93
LTN1-204ENST00000475344 OPLAHO14841 1288 aa9.27□□□□□ -0.93
LTN1-204ENST00000475344 MICALL1Q8N3F8 863 aa9.27□□□□□ -0.93
LTN1-204ENST00000475344 COL26A1Q96A83 441 aa9.27□□□□□ -0.93
LTN1-204ENST00000475344 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
LTN1-204ENST00000475344 SUPT5HO00267 1087 aaKnown RBP9.26□□□□□ -0.93
LTN1-204ENST00000475344 XYLBO75191 536 aa9.26□□□□□ -0.93
LTN1-204ENST00000475344 PPP1R15AO75807 674 aaPredicted RBP9.26□□□□□ -0.93
LTN1-204ENST00000475344 MLLT1Q03111 559 aaPredicted RBP9.26□□□□□ -0.93
LTN1-204ENST00000475344 JPH1Q9HDC5 661 aaPredicted RBP9.26□□□□□ -0.93
LTN1-204ENST00000475344 ZFATQ9P243 1243 aa9.26□□□□□ -0.93
LTN1-204ENST00000475344 SCNN1AP37088 669 aa9.25□□□□□ -0.93
LTN1-204ENST00000475344 FAM26DQ5JW98 314 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms