RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 SAGE1Q9NXZ1 904 aa19.06■□□□□ 0.64
ATG9A-220ENST00000475339 FAM177BA6PVY3 158 aa19.05■□□□□ 0.64
ATG9A-220ENST00000475339 CTU1Q7Z7A3 348 aaKnown RBP19.05■□□□□ 0.64
ATG9A-220ENST00000475339 RNF186Q9NXI6 227 aa19.05■□□□□ 0.64
ATG9A-220ENST00000475339 HPS5Q9UPZ3 1129 aa19.05■□□□□ 0.64
ATG9A-220ENST00000475339 PIP4K2AP48426 406 aaPredicted RBP19.04■□□□□ 0.64
ATG9A-220ENST00000475339 MTHFSDQ2M296 383 aaKnown RBP19.04■□□□□ 0.64
ATG9A-220ENST00000475339 ZNF790Q6PG37 636 aa19.04■□□□□ 0.64
ATG9A-220ENST00000475339 PGAP2Q9UHJ9 254 aa19.04■□□□□ 0.64
ATG9A-220ENST00000475339 FAM155AB1AL88 458 aaPredicted RBP19.03■□□□□ 0.64
ATG9A-220ENST00000475339 KIF23Q02241 960 aaPredicted RBP19.03■□□□□ 0.64
ATG9A-220ENST00000475339 CC2D2BQ6DHV5 1058 aa19.03■□□□□ 0.64
ATG9A-220ENST00000475339 CLEC4GQ6UXB4 293 aa19.03■□□□□ 0.64
ATG9A-220ENST00000475339 HMOX1P09601 288 aa19.02■□□□□ 0.64
ATG9A-220ENST00000475339 DLK2Q6UY11 383 aa19.02■□□□□ 0.64
ATG9A-220ENST00000475339 SLC51AQ86UW1 340 aa19.02■□□□□ 0.64
ATG9A-220ENST00000475339 NIM1KQ8IY84 436 aa19.02■□□□□ 0.64
ATG9A-220ENST00000475339 NIP7Q9Y221 180 aaKnown RBP eCLIP19.02■□□□□ 0.64
ATG9A-220ENST00000475339 HIRAP54198 1017 aaPredicted RBP19.01■□□□□ 0.63
ATG9A-220ENST00000475339 CDC37L1Q7L3B6 337 aa19.01■□□□□ 0.63
ATG9A-220ENST00000475339 ZNF652Q9Y2D9 606 aa19.01■□□□□ 0.63
ATG9A-220ENST00000475339 GMPSP49915 693 aaPredicted RBP19■□□□□ 0.63
ATG9A-220ENST00000475339 RGMBQ6NW40 437 aa19■□□□□ 0.63
ATG9A-220ENST00000475339 GTF2E1P29083 439 aaPredicted RBP18.99■□□□□ 0.63
ATG9A-220ENST00000475339 CXCL9Q07325 125 aa18.99■□□□□ 0.63
ATG9A-220ENST00000475339 USP48Q86UV5 1035 aa18.99■□□□□ 0.63
ATG9A-220ENST00000475339 ZC3H15Q8WU90 426 aaKnown RBP18.99■□□□□ 0.63
ATG9A-220ENST00000475339 FMNL2Q96PY5 1086 aa18.99■□□□□ 0.63
ATG9A-220ENST00000475339 NPC1L1Q9UHC9 1359 aa18.98■□□□□ 0.63
ATG9A-220ENST00000475339 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
ATG9A-220ENST00000475339 PPIP5K2O43314 1243 aa18.98■□□□□ 0.63
ATG9A-220ENST00000475339 CRY2Q49AN0 593 aa18.98■□□□□ 0.63
ATG9A-220ENST00000475339 MORC1Q86VD1 984 aa18.98■□□□□ 0.63
ATG9A-220ENST00000475339 AOC3Q16853 763 aa18.97■□□□□ 0.63
ATG9A-220ENST00000475339 TRPM4Q8TD43 1214 aa18.97■□□□□ 0.63
ATG9A-220ENST00000475339 CCDC102AQ96A19 550 aa18.97■□□□□ 0.63
ATG9A-220ENST00000475339 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
ATG9A-220ENST00000475339 TEFQ10587 303 aa18.96■□□□□ 0.63
ATG9A-220ENST00000475339 GRIPAP1Q4V328 841 aa18.96■□□□□ 0.63
ATG9A-220ENST00000475339 IL17REQ8NFR9 667 aa18.96■□□□□ 0.63
ATG9A-220ENST00000475339 CSRNP1Q96S65 589 aa18.96■□□□□ 0.63
ATG9A-220ENST00000475339 KCNQ3O43525 872 aa18.95■□□□□ 0.62
ATG9A-220ENST00000475339 FXR1P51114 621 aaKnown RBP eCLIP18.95■□□□□ 0.62
ATG9A-220ENST00000475339 ZNF157P51786 506 aaPredicted RBP18.95■□□□□ 0.62
ATG9A-220ENST00000475339 ZNRF3Q9ULT6 936 aa18.95■□□□□ 0.62
ATG9A-220ENST00000475339 SHTN1A0MZ66 631 aa18.94■□□□□ 0.62
ATG9A-220ENST00000475339 PKN2Q16513 984 aaKnown RBP18.94■□□□□ 0.62
ATG9A-220ENST00000475339 NUTM1Q86Y26 1132 aa18.94■□□□□ 0.62
ATG9A-220ENST00000475339 RPGRQ92834 1020 aaKnown RBP18.94■□□□□ 0.62
ATG9A-220ENST00000475339 BCL2L13Q9BXK5 485 aa18.94■□□□□ 0.62
ATG9A-220ENST00000475339 GBA2Q9HCG7 927 aaPredicted RBP18.94■□□□□ 0.62
ATG9A-220ENST00000475339 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
ATG9A-220ENST00000475339 PRAMEF22A3QJZ6 481 aa18.93■□□□□ 0.62
ATG9A-220ENST00000475339 HOXA10P31260 410 aaPredicted RBP18.93■□□□□ 0.62
ATG9A-220ENST00000475339 HLFQ16534 295 aa18.93■□□□□ 0.62
ATG9A-220ENST00000475339 MKI67P46013 3256 aaKnown RBP18.93■□□□□ 0.62
ATG9A-220ENST00000475339 AKAP11Q9UKA4 1901 aa18.92■□□□□ 0.62
ATG9A-220ENST00000475339 PPEF1O14829 653 aaPredicted RBP18.92■□□□□ 0.62
ATG9A-220ENST00000475339 C2orf69Q8N8R5 385 aa18.92■□□□□ 0.62
ATG9A-220ENST00000475339 PANK3Q9H999 370 aa18.92■□□□□ 0.62
ATG9A-220ENST00000475339 HDAC9Q9UKV0 1011 aa18.92■□□□□ 0.62
ATG9A-220ENST00000475339 CNOT7Q9UIV1 285 aaKnown RBP18.91■□□□□ 0.62
ATG9A-220ENST00000475339 RAD17O75943 681 aa18.9■□□□□ 0.62
ATG9A-220ENST00000475339 SLC10A3P09131 477 aa18.9■□□□□ 0.62
ATG9A-220ENST00000475339 KRT26Q7Z3Y9 468 aa18.9■□□□□ 0.62
ATG9A-220ENST00000475339 CDHR2Q9BYE9 1310 aa18.9■□□□□ 0.62
ATG9A-220ENST00000475339 NBPF26B4DH59 902 aa18.89■□□□□ 0.61
ATG9A-220ENST00000475339 RGL2O15211 777 aa18.89■□□□□ 0.61
ATG9A-220ENST00000475339 NBPF10Q6P3W6 841 aaKnown RBP18.89■□□□□ 0.61
ATG9A-220ENST00000475339 BTBD11A6QL63 1104 aa18.88■□□□□ 0.61
ATG9A-220ENST00000475339 H7C1D1 291 aa18.88■□□□□ 0.61
ATG9A-220ENST00000475339 ZNF296Q8WUU4 475 aaPredicted RBP18.88■□□□□ 0.61
ATG9A-220ENST00000475339 RBM17Q96I25 401 aaKnown RBP18.88■□□□□ 0.61
ATG9A-220ENST00000475339 CRAMP1Q96RY5 1269 aa18.88■□□□□ 0.61
ATG9A-220ENST00000475339 VPS33BQ9H267 617 aa18.88■□□□□ 0.61
ATG9A-220ENST00000475339 KIF7Q2M1P5 1343 aa18.88■□□□□ 0.61
ATG9A-220ENST00000475339 GNAT3A8MTJ3 354 aa18.87■□□□□ 0.61
ATG9A-220ENST00000475339 ADM5C9JUS6 153 aa18.87■□□□□ 0.61
ATG9A-220ENST00000475339 TNIP1Q15025 636 aa18.87■□□□□ 0.61
ATG9A-220ENST00000475339 SAMD7Q7Z3H4 446 aa18.87■□□□□ 0.61
ATG9A-220ENST00000475339 MICALL2Q8IY33 904 aa18.87■□□□□ 0.61
ATG9A-220ENST00000475339 NYXQ9GZU5 481 aa18.87■□□□□ 0.61
ATG9A-220ENST00000475339 TMX4Q9H1E5 349 aaPredicted RBP18.86■□□□□ 0.61
ATG9A-220ENST00000475339 RIC1Q4ADV7 1423 aa18.85■□□□□ 0.61
ATG9A-220ENST00000475339 TBC1D8O95759 1140 aa18.85■□□□□ 0.61
ATG9A-220ENST00000475339 FBXO46Q6PJ61 603 aaPredicted RBP18.85■□□□□ 0.61
ATG9A-220ENST00000475339 C3orf67Q6ZVT6 689 aa18.85■□□□□ 0.61
ATG9A-220ENST00000475339 ATP6V0A2Q9Y487 856 aa18.85■□□□□ 0.61
ATG9A-220ENST00000475339 SIPA1L3O60292 1781 aaPredicted RBP18.85■□□□□ 0.61
ATG9A-220ENST00000475339 DLL1O00548 723 aa18.84■□□□□ 0.61
ATG9A-220ENST00000475339 EGFRP00533 1210 aa18.84■□□□□ 0.61
ATG9A-220ENST00000475339 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
ATG9A-220ENST00000475339 TBC1D10BQ4KMP7 808 aaPredicted RBP18.84■□□□□ 0.61
ATG9A-220ENST00000475339 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
ATG9A-220ENST00000475339 YDJCA8MPS7 323 aa18.83■□□□□ 0.6
ATG9A-220ENST00000475339 RASAL3Q86YV0 1011 aa18.83■□□□□ 0.6
ATG9A-220ENST00000475339 REM2Q8IYK8 340 aaPredicted RBP18.83■□□□□ 0.6
ATG9A-220ENST00000475339 SUPT20HQ8NEM7 779 aa18.83■□□□□ 0.6
ATG9A-220ENST00000475339 RTFDC1Q9BY42 306 aaPredicted RBP18.83■□□□□ 0.6
ATG9A-220ENST00000475339 SZT2Q5T011 3432 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms