RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 LRRC37A3O60309 1634 aa19.42■□□□□ 0.7
TPR-205ENST00000474852 SETD1BQ9UPS6 1966 aaKnown RBP19.42■□□□□ 0.7
TPR-205ENST00000474852 NECTIN1Q15223 517 aa19.41■□□□□ 0.7
TPR-205ENST00000474852 ANO6Q4KMQ2 910 aa19.41■□□□□ 0.7
TPR-205ENST00000474852 C16orf45Q96MC5 204 aaPredicted RBP19.41■□□□□ 0.7
TPR-205ENST00000474852 TNMDQ9H2S6 317 aa19.41■□□□□ 0.7
TPR-205ENST00000474852 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
TPR-205ENST00000474852 NMIQ13287 307 aaPredicted RBP19.41■□□□□ 0.7
TPR-205ENST00000474852 CWF19L2Q2TBE0 894 aaKnown RBP19.41■□□□□ 0.7
TPR-205ENST00000474852 ABTB2Q8N961 1025 aa19.41■□□□□ 0.7
TPR-205ENST00000474852 CCDC8Q9H0W5 538 aaPredicted RBP19.41■□□□□ 0.7
TPR-205ENST00000474852 U2AF2P26368 475 aaKnown RBP eCLIP19.4■□□□□ 0.71e-6■□□□□ 10.6
TPR-205ENST00000474852 PTPRUQ92729 1446 aa19.4■□□□□ 0.7
TPR-205ENST00000474852 GPATCH3Q96I76 525 aa19.39■□□□□ 0.7
TPR-205ENST00000474852 RGPD8O14715 1765 aaPredicted RBP19.39■□□□□ 0.7
TPR-205ENST00000474852 LARP1Q6PKG0 1096 aaKnown RBP19.39■□□□□ 0.69
TPR-205ENST00000474852 SPATA32Q96LK8 384 aa19.39■□□□□ 0.69
TPR-205ENST00000474852 TM6SF1Q9BZW5 370 aa19.39■□□□□ 0.69
TPR-205ENST00000474852 TRIM5Q9C035 493 aa19.39■□□□□ 0.69
TPR-205ENST00000474852 SIL1Q9H173 461 aa19.39■□□□□ 0.69
TPR-205ENST00000474852 CBX8Q9HC52 389 aa19.39■□□□□ 0.69
TPR-205ENST00000474852 MAP3K2Q9Y2U5 619 aa19.38■□□□□ 0.69
TPR-205ENST00000474852 ADCY9O60503 1353 aa19.38■□□□□ 0.69
TPR-205ENST00000474852 EVI5LQ96CN4 794 aa19.38■□□□□ 0.69
TPR-205ENST00000474852 BOLA2Q9H3K6 86 aa19.38■□□□□ 0.69
TPR-205ENST00000474852 TLR7Q9NYK1 1049 aaKnown RBP19.38■□□□□ 0.69
TPR-205ENST00000474852 A0A0D9SFI3 127 aa19.38■□□□□ 0.69
TPR-205ENST00000474852 SLC27A2O14975 620 aa19.38■□□□□ 0.69
TPR-205ENST00000474852 TPM3P06753 285 aa19.38■□□□□ 0.69
TPR-205ENST00000474852 USP42Q9H9J4 1324 aaKnown RBP19.37■□□□□ 0.69
TPR-205ENST00000474852 IGSF3O75054 1194 aa19.37■□□□□ 0.69
TPR-205ENST00000474852 PROSER3Q2NL68 480 aa19.37■□□□□ 0.69
TPR-205ENST00000474852 UTP14CQ5TAP6 766 aaKnown RBP19.37■□□□□ 0.69
TPR-205ENST00000474852 MPRIPQ6WCQ1 1025 aa19.37■□□□□ 0.69
TPR-205ENST00000474852 N4BP2Q86UW6 1770 aaPredicted RBP19.37■□□□□ 0.69
TPR-205ENST00000474852 BLOC1S2Q6QNY1 142 aa19.37■□□□□ 0.69
TPR-205ENST00000474852 BICD2Q8TD16 824 aa19.37■□□□□ 0.69
TPR-205ENST00000474852 PIK3C2AO00443 1686 aa19.37■□□□□ 0.69
TPR-205ENST00000474852 TEFQ10587 303 aa19.36■□□□□ 0.69
TPR-205ENST00000474852 FSD1Q9BTV5 496 aa19.36■□□□□ 0.69
TPR-205ENST00000474852 BTBD11A6QL63 1104 aa19.36■□□□□ 0.69
TPR-205ENST00000474852 NR1I2O75469 434 aa19.36■□□□□ 0.69
TPR-205ENST00000474852 EAF2Q96CJ1 260 aaPredicted RBP19.36■□□□□ 0.69
TPR-205ENST00000474852 DDX11Q96FC9 970 aa19.36■□□□□ 0.69
TPR-205ENST00000474852 DNAJC25Q9H1X3 360 aa19.36■□□□□ 0.69
TPR-205ENST00000474852 KLHDC4Q8TBB5 520 aa19.35■□□□□ 0.69
TPR-205ENST00000474852 MAP4K1Q92918 833 aa19.35■□□□□ 0.69
TPR-205ENST00000474852 BABAM1Q9NWV8 329 aa19.35■□□□□ 0.69
TPR-205ENST00000474852 NWD1Q149M9 1564 aa19.35■□□□□ 0.69
TPR-205ENST00000474852 PRAMEF22A3QJZ6 481 aa19.35■□□□□ 0.69
TPR-205ENST00000474852 CEBPAP49715 358 aaPredicted RBP19.35■□□□□ 0.69
TPR-205ENST00000474852 CEBPZQ03701 1054 aaKnown RBP19.35■□□□□ 0.69
TPR-205ENST00000474852 EDC3Q96F86 508 aaKnown RBP19.35■□□□□ 0.69
TPR-205ENST00000474852 DIP2BQ9P265 1576 aa19.34■□□□□ 0.69
TPR-205ENST00000474852 JAK2O60674 1132 aa19.34■□□□□ 0.69
TPR-205ENST00000474852 FOSBP53539 338 aa19.34■□□□□ 0.69
TPR-205ENST00000474852 AIMP1Q12904 312 aaKnown RBP19.34■□□□□ 0.69
TPR-205ENST00000474852 NAA30Q147X3 362 aaPredicted RBP19.34■□□□□ 0.69
TPR-205ENST00000474852 NBPF6Q5VWK0 638 aa19.34■□□□□ 0.69
TPR-205ENST00000474852 LEO1Q8WVC0 666 aaPredicted RBP19.34■□□□□ 0.69
TPR-205ENST00000474852 NBPF4Q96M43 638 aa19.34■□□□□ 0.69
TPR-205ENST00000474852 SASH1O94885 1247 aa19.33■□□□□ 0.69
TPR-205ENST00000474852 PDCP20941 246 aa19.33■□□□□ 0.69
TPR-205ENST00000474852 PSMA5P28066 241 aa19.33■□□□□ 0.69
TPR-205ENST00000474852 ZNF589Q86UQ0 364 aaPredicted RBP19.33■□□□□ 0.69
TPR-205ENST00000474852 KCNB2Q92953 911 aa19.33■□□□□ 0.69
TPR-205ENST00000474852 ZNF165P49910 485 aa19.33■□□□□ 0.68
TPR-205ENST00000474852 SCAND2PQ9GZW5 306 aaPredicted RBP19.33■□□□□ 0.68
TPR-205ENST00000474852 TOB2Q14106 344 aaPredicted RBP19.32■□□□□ 0.68
TPR-205ENST00000474852 ZNF592Q92610 1267 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 ELP1O95163 1332 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 ZNF75DP51815 510 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 FGD1P98174 961 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 ZSCAN25Q6NSZ9 544 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 NDUFB9Q9Y6M9 179 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 CRYBG1Q9Y4K1 1723 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 UBR1Q8IWV7 1749 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 NPHP3Q7Z494 1330 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 TNNT1P13805 278 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 G3BP1Q13283 466 aaKnown RBP eCLIP19.32■□□□□ 0.68
TPR-205ENST00000474852 LRRC59Q96AG4 307 aaKnown RBP19.32■□□□□ 0.68
TPR-205ENST00000474852 PGBD1Q96JS3 809 aa19.32■□□□□ 0.68
TPR-205ENST00000474852 CEMIPQ8WUJ3 1361 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 RPS6KB1P23443 525 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 MTX1Q13505 466 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 ZNF530Q6P9A1 599 aaPredicted RBP19.31■□□□□ 0.68
TPR-205ENST00000474852 ERC1Q8IUD2 1116 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 ANKRD7Q92527 254 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 SUCLG2Q96I99 432 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 BICC1Q9H694 974 aaKnown RBP19.31■□□□□ 0.68
TPR-205ENST00000474852 DBF4Q9UBU7 674 aaPredicted RBP19.31■□□□□ 0.68
TPR-205ENST00000474852 CLIP2Q9UDT6 1046 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 PLEKHG1Q9ULL1 1385 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 NCBP1Q09161 790 aaKnown RBP19.31■□□□□ 0.68
TPR-205ENST00000474852 RNF20Q5VTR2 975 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 CLSTN2Q9H4D0 955 aa19.31■□□□□ 0.68
TPR-205ENST00000474852 A0A087WWV3 80 aa19.3■□□□□ 0.68
TPR-205ENST00000474852 CTIFO43310 598 aaKnown RBP19.3■□□□□ 0.68
TPR-205ENST00000474852 CHGBP05060 677 aa19.3■□□□□ 0.68
TPR-205ENST00000474852 CCDC144BQ3MJ40 725 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms