RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 PHAXQ9H814 394 aaKnown RBP26.01■■□□□ 1.75
HLA-B-252ENST00000474381 TRIM28Q13263 835 aaKnown RBP26■■□□□ 1.75
HLA-B-252ENST00000474381 ISCA1Q9BUE6 129 aa26■■□□□ 1.75
HLA-B-252ENST00000474381 C21orf2O43822 256 aa25.99■■□□□ 1.75
HLA-B-252ENST00000474381 DDX58O95786 925 aaKnown RBP25.99■■□□□ 1.75
HLA-B-252ENST00000474381 ALDH1B1P30837 517 aa25.99■■□□□ 1.75
HLA-B-252ENST00000474381 RIC3Q7Z5B4 369 aa25.99■■□□□ 1.75
HLA-B-252ENST00000474381 SPINK5Q9NQ38 1064 aaPredicted RBP25.99■■□□□ 1.75
HLA-B-252ENST00000474381 ANKRD36CQ5JPF3 1778 aa25.99■■□□□ 1.75
HLA-B-252ENST00000474381 HOXA10P31260 410 aaPredicted RBP25.98■■□□□ 1.75
HLA-B-252ENST00000474381 C9orf131Q5VYM1 1079 aa25.98■■□□□ 1.75
HLA-B-252ENST00000474381 DIEXFQ68CQ4 756 aaKnown RBP25.98■■□□□ 1.75
HLA-B-252ENST00000474381 TRMT112Q9UI30 125 aaKnown RBP25.98■■□□□ 1.75
HLA-B-252ENST00000474381 TNRC6CQ9HCJ0 1690 aaKnown RBP25.97■■□□□ 1.75
HLA-B-252ENST00000474381 SH3TC1Q8TE82 1336 aa25.97■■□□□ 1.75
HLA-B-252ENST00000474381 NLRP3Q96P20 1036 aa25.97■■□□□ 1.75
HLA-B-252ENST00000474381 NFKBIEO00221 500 aa25.96■■□□□ 1.75
HLA-B-252ENST00000474381 EXOSC9Q06265 439 aaKnown RBP25.96■■□□□ 1.75
HLA-B-252ENST00000474381 C7orf43Q8WVR3 580 aa25.96■■□□□ 1.75
HLA-B-252ENST00000474381 RPGRQ92834 1020 aaKnown RBP25.96■■□□□ 1.75
HLA-B-252ENST00000474381 LTBP3Q9NS15 1303 aa25.95■■□□□ 1.75
HLA-B-252ENST00000474381 VAMP4O75379 141 aa25.95■■□□□ 1.74
HLA-B-252ENST00000474381 LMNB1P20700 586 aa25.95■■□□□ 1.74
HLA-B-252ENST00000474381 RASSF7Q02833 373 aa25.95■■□□□ 1.74
HLA-B-252ENST00000474381 ARFGEF2Q9Y6D5 1785 aa25.95■■□□□ 1.74
HLA-B-252ENST00000474381 ZC3H4Q9UPT8 1303 aaKnown RBP25.94■■□□□ 1.74
HLA-B-252ENST00000474381 RNF181Q9P0P0 153 aa25.94■■□□□ 1.74
HLA-B-252ENST00000474381 ZNF219Q9P2Y4 722 aaPredicted RBP25.94■■□□□ 1.74
HLA-B-252ENST00000474381 ATP5J2-PTCD1G3V325 749 aa25.93■■□□□ 1.74
HLA-B-252ENST00000474381 SLC4A2P04920 1241 aa25.93■■□□□ 1.74
HLA-B-252ENST00000474381 CRAMP1Q96RY5 1269 aa25.93■■□□□ 1.74
HLA-B-252ENST00000474381 CCDC93Q567U6 631 aa25.92■■□□□ 1.74
HLA-B-252ENST00000474381 KSR2Q6VAB6 950 aa25.92■■□□□ 1.74
HLA-B-252ENST00000474381 RBM17Q96I25 401 aaKnown RBP25.92■■□□□ 1.74
HLA-B-252ENST00000474381 METTL22Q9BUU2 404 aaPredicted RBP25.92■■□□□ 1.74
HLA-B-252ENST00000474381 GPBP1L1Q9HC44 474 aaPredicted RBP25.92■■□□□ 1.74
HLA-B-252ENST00000474381 SLX4Q8IY92 1834 aa25.92■■□□□ 1.74
HLA-B-252ENST00000474381 C3orf67Q6ZVT6 689 aa25.91■■□□□ 1.74
HLA-B-252ENST00000474381 CCDC191Q8NCU4 936 aa25.91■■□□□ 1.74
HLA-B-252ENST00000474381 TAOK3Q9H2K8 898 aa25.91■■□□□ 1.74
HLA-B-252ENST00000474381 E9PSI1 815 aa25.9■■□□□ 1.74
HLA-B-252ENST00000474381 TCERG1O14776 1098 aaKnown RBP25.9■■□□□ 1.74
HLA-B-252ENST00000474381 MYD88Q99836 296 aa25.9■■□□□ 1.74
HLA-B-252ENST00000474381 MAP3K2Q9Y2U5 619 aa25.9■■□□□ 1.74
HLA-B-252ENST00000474381 PI4KAP2A4QPH2 592 aa25.89■■□□□ 1.74
HLA-B-252ENST00000474381 HCLS1P14317 486 aaPredicted RBP25.89■■□□□ 1.74
HLA-B-252ENST00000474381 CC2D2BQ6DHV5 1058 aa25.89■■□□□ 1.74
HLA-B-252ENST00000474381 RTKN2Q8IZC4 609 aa25.89■■□□□ 1.74
HLA-B-252ENST00000474381 SYNE4Q8N205 404 aa25.89■■□□□ 1.74
HLA-B-252ENST00000474381 PI4KAP1Q8N8J0 262 aa25.89■■□□□ 1.74
HLA-B-252ENST00000474381 PRELPP51888 382 aa25.88■■□□□ 1.73
HLA-B-252ENST00000474381 FLIIQ13045 1269 aa25.88■■□□□ 1.73
HLA-B-252ENST00000474381 ZBTB38Q8NAP3 1195 aaPredicted RBP25.88■■□□□ 1.73
HLA-B-252ENST00000474381 FAM89AQ96GI7 184 aa25.88■■□□□ 1.73
HLA-B-252ENST00000474381 HSP90B1P14625 803 aaKnown RBP25.87■■□□□ 1.73
HLA-B-252ENST00000474381 GRIPAP1Q4V328 841 aa25.87■■□□□ 1.73
HLA-B-252ENST00000474381 G2E3Q7L622 706 aa25.87■■□□□ 1.73
HLA-B-252ENST00000474381 NEXNQ0ZGT2 675 aa25.86■■□□□ 1.73
HLA-B-252ENST00000474381 MIER1Q8N108 512 aa25.86■■□□□ 1.73
HLA-B-252ENST00000474381 ZNF526Q8TF50 670 aaPredicted RBP25.86■■□□□ 1.73
HLA-B-252ENST00000474381 CWC25Q9NXE8 425 aaPredicted RBP25.86■■□□□ 1.73
HLA-B-252ENST00000474381 FER1L6Q2WGJ9 1857 aa25.85■■□□□ 1.73
HLA-B-252ENST00000474381 FKBP4Q02790 459 aaKnown RBP eCLIP25.85■■□□□ 1.73
HLA-B-252ENST00000474381 SBF1O95248 1867 aa25.85■■□□□ 1.73
HLA-B-252ENST00000474381 PCCAP05165 728 aaPredicted RBP25.84■■□□□ 1.73
HLA-B-252ENST00000474381 SLFN5Q08AF3 891 aa25.84■■□□□ 1.73
HLA-B-252ENST00000474381 SF3B3Q15393 1217 aaKnown RBP25.84■■□□□ 1.73
HLA-B-252ENST00000474381 SNED1Q8TER0 1413 aa25.83■■□□□ 1.73
HLA-B-252ENST00000474381 IRS4O14654 1257 aaPredicted RBP25.83■■□□□ 1.73
HLA-B-252ENST00000474381 PPEF1O14829 653 aaPredicted RBP25.83■■□□□ 1.73
HLA-B-252ENST00000474381 FKBP5Q13451 457 aaPredicted RBP25.83■■□□□ 1.73
HLA-B-252ENST00000474381 DDX46Q7L014 1031 aaKnown RBP25.83■■□□□ 1.73
HLA-B-252ENST00000474381 ABCC4O15439 1325 aa25.83■■□□□ 1.73
HLA-B-252ENST00000474381 KDM2BQ8NHM5 1336 aa25.83■■□□□ 1.73
HLA-B-252ENST00000474381 BBOX1O75936 387 aa25.82■■□□□ 1.72
HLA-B-252ENST00000474381 IGKV5-2P06315 115 aa25.82■■□□□ 1.72
HLA-B-252ENST00000474381 OLFM4Q6UX06 510 aa25.82■■□□□ 1.72
HLA-B-252ENST00000474381 ZNF428Q96B54 188 aa25.82■■□□□ 1.72
HLA-B-252ENST00000474381 PSMD1Q99460 953 aa25.82■■□□□ 1.72
HLA-B-252ENST00000474381 CACNA1SQ13698 1873 aa25.82■■□□□ 1.72
HLA-B-252ENST00000474381 GRAPQ13588 217 aa25.8■■□□□ 1.72
HLA-B-252ENST00000474381 RTL5Q5HYW3 569 aaPredicted RBP25.8■■□□□ 1.72
HLA-B-252ENST00000474381 GRAPLQ8TC17 118 aaPredicted RBP25.8■■□□□ 1.72
HLA-B-252ENST00000474381 DNAAF4Q8WXU2 420 aa25.8■■□□□ 1.72
HLA-B-252ENST00000474381 TMX4Q9H1E5 349 aaPredicted RBP25.8■■□□□ 1.72
HLA-B-252ENST00000474381 ATP6V0A2Q9Y487 856 aa25.8■■□□□ 1.72
HLA-B-252ENST00000474381 TMC4Q7Z404 712 aa25.79■■□□□ 1.72
HLA-B-252ENST00000474381 CDHR2Q9BYE9 1310 aa25.79■■□□□ 1.72
HLA-B-252ENST00000474381 DDX60Q8IY21 1712 aaKnown RBP25.78■■□□□ 1.72
HLA-B-252ENST00000474381 NEURL1BA8MQ27 555 aa25.78■■□□□ 1.72
HLA-B-252ENST00000474381 TRMT2AQ8IZ69 625 aaKnown RBP25.78■■□□□ 1.72
HLA-B-252ENST00000474381 CACNA1FO60840 1977 aa25.78■■□□□ 1.72
HLA-B-252ENST00000474381 LAMB2P55268 1798 aa25.77■■□□□ 1.72
HLA-B-252ENST00000474381 GLTPD2A6NH11 291 aa25.77■■□□□ 1.72
HLA-B-252ENST00000474381 KIF3CO14782 793 aa25.77■■□□□ 1.72
HLA-B-252ENST00000474381 PDE8AO60658 829 aa25.77■■□□□ 1.72
HLA-B-252ENST00000474381 C1QTNF8P60827 252 aa25.77■■□□□ 1.72
HLA-B-252ENST00000474381 LINS1Q8NG48 757 aa25.77■■□□□ 1.72
HLA-B-252ENST00000474381 CWF19L2Q2TBE0 894 aaKnown RBP25.76■■□□□ 1.71
HLA-B-252ENST00000474381 SP8Q8IXZ3 490 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms