RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CEMIPQ8WUJ3 1361 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 NCKAP5LQ9HCH0 1330 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 NLRP6P59044 892 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 GABPB1Q06547 395 aaPredicted RBP7.23□□□□□ -1.25
HERC4-209ENST00000473533 PPP4R3BQ5MIZ7 849 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 CREB3L3Q68CJ9 461 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 CCDC112Q8NEF3 446 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 MAP4K1Q92918 833 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 BCL2L12Q9HB09 334 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 RBM8AQ9Y5S9 174 aaKnown RBP7.23□□□□□ -1.25
HERC4-209ENST00000473533 MED1Q15648 1581 aaPredicted RBP7.23□□□□□ -1.25
HERC4-209ENST00000473533 TPM4P67936 248 aa7.23□□□□□ -1.25
HERC4-209ENST00000473533 PLEKHO1Q53GL0 409 aaPredicted RBP7.23□□□□□ -1.25
HERC4-209ENST00000473533 LLPHQ9BRT6 129 aaKnown RBP7.23□□□□□ -1.25
HERC4-209ENST00000473533 CCP110O43303 1012 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 GSDMDP57764 484 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 SARM1Q6SZW1 724 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 RASEFQ8IZ41 740 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 BICD2Q8TD16 824 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 ZNF396Q96N95 335 aaPredicted RBP7.22□□□□□ -1.25
HERC4-209ENST00000473533 PRDM4Q9UKN5 801 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 PIK3C2AO00443 1686 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 H3BQV1 296 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 ZNF75DP51815 510 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 EIF4A1P60842 406 aaKnown RBP7.22□□□□□ -1.25
HERC4-209ENST00000473533 ZRSR1Q15695 479 aaKnown RBP7.22□□□□□ -1.25
HERC4-209ENST00000473533 IFFO2Q5TF58 517 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 IL17REQ8NFR9 667 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 CHAMP1Q96JM3 812 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 SPG7Q9UQ90 795 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 U3KPZ7 1027 aaPredicted RBP7.22□□□□□ -1.25
HERC4-209ENST00000473533 KDM3BQ7LBC6 1761 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 TCHHQ07283 1943 aa7.22□□□□□ -1.25
HERC4-209ENST00000473533 RIOK3O14730 519 aaKnown RBP7.21□□□□□ -1.25
HERC4-209ENST00000473533 RPS6KB1P23443 525 aa7.21□□□□□ -1.25
HERC4-209ENST00000473533 STX1AQ16623 288 aa7.21□□□□□ -1.25
HERC4-209ENST00000473533 AKAP4Q5JQC9 854 aa7.21□□□□□ -1.25
HERC4-209ENST00000473533 KSR2Q6VAB6 950 aa7.21□□□□□ -1.25
HERC4-209ENST00000473533 KCNH5Q8NCM2 988 aa7.21□□□□□ -1.25
HERC4-209ENST00000473533 MRFAP1L1Q96HT8 127 aa7.21□□□□□ -1.25
HERC4-209ENST00000473533 MRVI1Q9Y6F6 885 aa7.21□□□□□ -1.25
HERC4-209ENST00000473533 LMTK3Q96Q04 1460 aa7.21□□□□□ -1.25
HERC4-209ENST00000473533 SOX12O15370 315 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 ZNF165P49910 485 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 CCDC73Q6ZRK6 1079 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 AACSQ86V21 672 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 ZNF830Q96NB3 372 aaPredicted RBP7.21□□□□□ -1.26
HERC4-209ENST00000473533 FSD1Q9BTV5 496 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 PI4KAP2A4QPH2 592 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 MAP4K4O95819 1239 aaPredicted RBP7.21□□□□□ -1.26
HERC4-209ENST00000473533 TNNT1P13805 278 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 NEXNQ0ZGT2 675 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 MLECQ14165 292 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 ME3Q16798 604 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 TPD52L1Q16890 204 aaPredicted RBP7.21□□□□□ -1.26
HERC4-209ENST00000473533 PLA2G4DQ86XP0 818 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 PI4KAP1Q8N8J0 262 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 SPC24Q8NBT2 197 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 LINS1Q8NG48 757 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 NECTIN2Q92692 538 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 ANO10Q9NW15 660 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 CLIP2Q9UDT6 1046 aa7.21□□□□□ -1.26
HERC4-209ENST00000473533 BECN2A8MW95 431 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 SLC27A2O14975 620 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 EIF2S2P20042 333 aaKnown RBP7.2□□□□□ -1.26
HERC4-209ENST00000473533 ANO6Q4KMQ2 910 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 C1orf141Q5JVX7 400 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 TTC6Q86TZ1 520 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 LEO1Q8WVC0 666 aaPredicted RBP7.2□□□□□ -1.26
HERC4-209ENST00000473533 CBX8Q9HC52 389 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 DACT1Q9NYF0 836 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 LMO7Q8WWI1 1683 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 NAA16Q6N069 864 aaPredicted RBP7.2□□□□□ -1.26
HERC4-209ENST00000473533 CCDC186Q7Z3E2 898 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 ZNF710Q8N1W2 664 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 IMPACTQ9P2X3 320 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 AMOTL2Q9Y2J4 779 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 NWD1Q149M9 1564 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 UTYO14607 1347 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 JCADQ9P266 1359 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 BTBD11A6QL63 1104 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 LRRFIP1Q32MZ4 808 aaKnown RBP7.2□□□□□ -1.26
HERC4-209ENST00000473533 ZSCAN25Q6NSZ9 544 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 CEP57L1Q8IYX8 460 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 RGS22Q8NE09 1264 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 IP6K1Q92551 441 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 KCNF1Q9H3M0 494 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 PHAXQ9H814 394 aaKnown RBP7.2□□□□□ -1.26
HERC4-209ENST00000473533 KCND1Q9NSA2 647 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 CHPF2Q9P2E5 772 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 PYCARDQ9ULZ3 195 aa7.2□□□□□ -1.26
HERC4-209ENST00000473533 CCDC66A2RUB6 948 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 KINO60870 393 aaKnown RBP7.19□□□□□ -1.26
HERC4-209ENST00000473533 NBPF7P0C2Y1 421 aaPredicted RBP7.19□□□□□ -1.26
HERC4-209ENST00000473533 PTGS1P23219 599 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 SLFNL1Q499Z3 407 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 TSPOAP1O95153 1857 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 ARHGAP23Q9P227 1491 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 GRM8O00222 908 aa7.19□□□□□ -1.26
HERC4-209ENST00000473533 ZSCAN20P17040 1043 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms