RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	SSFA2	P28290	1259 aa		13.39	□□□□□ -0.27
RPS18-231	ENST00000472218	HLF	Q16534	295 aa		13.39	□□□□□ -0.27
RPS18-231	ENST00000472218	ANKRD45	Q5TZF3	282 aa		13.39	□□□□□ -0.27
RPS18-231	ENST00000472218	ILDR2	Q71H61	639 aa		13.39	□□□□□ -0.27
RPS18-231	ENST00000472218	BICC1	Q9H694	974 aa	Known RBP	13.39	□□□□□ -0.27
RPS18-231	ENST00000472218	FBXO3	Q9UK99	471 aa		13.39	□□□□□ -0.27
RPS18-231	ENST00000472218	GNPAT	O15228	680 aa		13.38	□□□□□ -0.27
RPS18-231	ENST00000472218	KIF1BP	Q96EK5	621 aa		13.38	□□□□□ -0.27
RPS18-231	ENST00000472218	ARX	Q96QS3	562 aa		13.38	□□□□□ -0.27
RPS18-231	ENST00000472218	LRRCC1	Q9C099	1032 aa		13.38	□□□□□ -0.27
RPS18-231	ENST00000472218	COPRS	Q9NQ92	184 aa		13.38	□□□□□ -0.27
RPS18-231	ENST00000472218	ZPR1	O75312	459 aa		13.37	□□□□□ -0.27
RPS18-231	ENST00000472218	TXNRD1	Q16881	649 aa		13.37	□□□□□ -0.27
RPS18-231	ENST00000472218	TRAPPC3L	Q5T215	181 aa		13.37	□□□□□ -0.27
RPS18-231	ENST00000472218	CCDC125	Q86Z20	511 aa		13.37	□□□□□ -0.27
RPS18-231	ENST00000472218	FLAD1	Q8NFF5	587 aa		13.37	□□□□□ -0.27
RPS18-231	ENST00000472218	UTP14A	Q9BVJ6	771 aa	Known RBP	13.37	□□□□□ -0.27
RPS18-231	ENST00000472218	LRRC4B	Q9NT99	713 aa		13.37	□□□□□ -0.27
RPS18-231	ENST00000472218	MYH14	Q7Z406	1995 aa	Known RBP	13.36	□□□□□ -0.27
RPS18-231	ENST00000472218	SURF6	O75683	361 aa	Known RBP	13.36	□□□□□ -0.27
RPS18-231	ENST00000472218	APBA3	O96018	575 aa		13.36	□□□□□ -0.27
RPS18-231	ENST00000472218	CSF1R	P07333	972 aa		13.36	□□□□□ -0.27
RPS18-231	ENST00000472218	FOXO4	P98177	505 aa		13.36	□□□□□ -0.27
RPS18-231	ENST00000472218	SH3TC1	Q8TE82	1336 aa		13.36	□□□□□ -0.27
RPS18-231	ENST00000472218	RGS3	P49796	1198 aa		13.35	□□□□□ -0.27
RPS18-231	ENST00000472218	LNPK	Q9C0E8	428 aa		13.35	□□□□□ -0.27
RPS18-231	ENST00000472218	NYX	Q9GZU5	481 aa		13.35	□□□□□ -0.27
RPS18-231	ENST00000472218	TRMT112	Q9UI30	125 aa	Known RBP	13.35	□□□□□ -0.27
RPS18-231	ENST00000472218	USP42	Q9H9J4	1324 aa	Known RBP	13.35	□□□□□ -0.27
RPS18-231	ENST00000472218	C4B	P0C0L5	1744 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	TNS1	Q9HBL0	1735 aa	Known RBP	13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	PDE8A	O60658	829 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	EIF5B	O60841	1220 aa	Known RBP	13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	PDE4A	P27815	886 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	RFC4	P35249	363 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	RFX5	P48382	616 aa	Predicted RBP	13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	EPHA10	Q5JZY3	1008 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	LMBR1L	Q6UX01	489 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	PROM2	Q8N271	834 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	ARHGEF1	Q92888	912 aa	Known RBP	13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	OSBPL3	Q9H4L5	887 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	RGPD4	Q7Z3J3	1758 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	AOX1	Q06278	1338 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	UBN2	Q6ZU65	1347 aa		13.34	□□□□□ -0.27
RPS18-231	ENST00000472218	IRS4	O14654	1257 aa	Predicted RBP	13.33	□□□□□ -0.28
RPS18-231	ENST00000472218	CIAO1	O76071	339 aa		13.33	□□□□□ -0.28
RPS18-231	ENST00000472218	GPT	P24298	496 aa		13.33	□□□□□ -0.28
RPS18-231	ENST00000472218	BMP2KL	Q5H9B9	411 aa		13.33	□□□□□ -0.28
RPS18-231	ENST00000472218	SLC10A5	Q5PT55	438 aa		13.33	□□□□□ -0.28
RPS18-231	ENST00000472218	RHPN1	Q8TCX5	695 aa		13.33	□□□□□ -0.28
RPS18-231	ENST00000472218	EXOC6B	Q9Y2D4	811 aa		13.33	□□□□□ -0.28
RPS18-231	ENST00000472218	RTL9	Q8NET4	1388 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	NTSR2	O95665	410 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	CTSW	P56202	376 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	KCNQ4	P56696	695 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	PTPN12	Q05209	780 aa	Known RBP	13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	CCDC57	Q2TAC2	916 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	FAM161A	Q3B820	660 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	SUSD4	Q5VX71	490 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	CLASRP	Q8N2M8	674 aa	Known RBP	13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	FAM89A	Q96GI7	184 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	SETDB2	Q96T68	719 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	STAP2	Q9UGK3	403 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	TAF1L	Q8IZX4	1826 aa		13.32	□□□□□ -0.28
RPS18-231	ENST00000472218	ANKRD36C	Q5JPF3	1778 aa		13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	IL15	P40933	162 aa	Predicted RBP	13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	SF3B2	Q13435	895 aa	Known RBP	13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	OS9	Q13438	667 aa	Predicted RBP	13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	USPL1	Q5W0Q7	1092 aa		13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	TPTE2	Q6XPS3	522 aa		13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	PLEKHM2	Q8IWE5	1019 aa		13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	AKT1S1	Q96B36	256 aa		13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	BCL2L12	Q9HB09	334 aa		13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	GPR108	Q9NPR9	543 aa		13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	AFDN	P55196	1824 aa	Known RBP	13.31	□□□□□ -0.28
RPS18-231	ENST00000472218	BCOR	Q6W2J9	1755 aa		13.3	□□□□□ -0.28
RPS18-231	ENST00000472218	IFIT5	Q13325	482 aa	Known RBP	13.3	□□□□□ -0.28
RPS18-231	ENST00000472218	TTLL11	Q8NHH1	800 aa		13.3	□□□□□ -0.28
RPS18-231	ENST00000472218	SALL3	Q9BXA9	1300 aa		13.3	□□□□□ -0.28
RPS18-231	ENST00000472218	SCN7A	Q01118	1682 aa		13.3	□□□□□ -0.28
RPS18-231	ENST00000472218	NUP98	P52948	1817 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	BAG6	P46379	1132 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	SF3B3	Q15393	1217 aa	Known RBP	13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	CCDC152	Q4G0S7	254 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	GPATCH3	Q96I76	525 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	CAMKK2	Q96RR4	588 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	BACH2	Q9BYV9	841 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	TTC41P	Q6P2S7	1318 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	CARMIL3	Q8ND23	1372 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	RIC1	Q4ADV7	1423 aa		13.29	□□□□□ -0.28
RPS18-231	ENST00000472218	ANKRD18B	A2A2Z9	1011 aa		13.28	□□□□□ -0.28
RPS18-231	ENST00000472218	EYA2	O00167	538 aa		13.28	□□□□□ -0.28
RPS18-231	ENST00000472218	MX1	P20591	662 aa		13.28	□□□□□ -0.28
RPS18-231	ENST00000472218	PDE1A	P54750	535 aa		13.28	□□□□□ -0.28
RPS18-231	ENST00000472218	TBC1D9B	Q66K14	1250 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms