RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 IGFBP4P22692 258 aa7.46□□□□□ -1.22
PRPF40A-207ENST00000471701 TYRO3Q06418 890 aa7.46□□□□□ -1.22
PRPF40A-207ENST00000471701 RTN1Q16799 776 aa7.46□□□□□ -1.22
PRPF40A-207ENST00000471701 FAM200AQ8TCP9 573 aa7.46□□□□□ -1.22
PRPF40A-207ENST00000471701 BHMTQ93088 406 aa7.46□□□□□ -1.22
PRPF40A-207ENST00000471701 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
PRPF40A-207ENST00000471701 PROCP04070 461 aa7.45□□□□□ -1.22
PRPF40A-207ENST00000471701 BAG6P46379 1132 aa7.45□□□□□ -1.22
PRPF40A-207ENST00000471701 RAB44Q7Z6P3 723 aaPredicted RBP7.45□□□□□ -1.22
PRPF40A-207ENST00000471701 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
PRPF40A-207ENST00000471701 IGFLR1Q9H665 355 aa7.45□□□□□ -1.22
PRPF40A-207ENST00000471701 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
PRPF40A-207ENST00000471701 M0R082 166 aa7.44□□□□□ -1.22
PRPF40A-207ENST00000471701 ADH7P40394 386 aa7.44□□□□□ -1.22
PRPF40A-207ENST00000471701 TBC1D8BQ0IIM8 1120 aa7.44□□□□□ -1.22
PRPF40A-207ENST00000471701 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
PRPF40A-207ENST00000471701 PRRT3Q5FWE3 981 aa7.44□□□□□ -1.22
PRPF40A-207ENST00000471701 ZNF417Q8TAU3 575 aa7.44□□□□□ -1.22
PRPF40A-207ENST00000471701 TRIM11Q96F44 468 aa7.44□□□□□ -1.22
PRPF40A-207ENST00000471701 ZNF587Q96SQ5 575 aaPredicted RBP7.44□□□□□ -1.22
PRPF40A-207ENST00000471701 SPATA31C1P0DKV0 1188 aa7.43□□□□□ -1.22
PRPF40A-207ENST00000471701 EPB42P16452 691 aa7.43□□□□□ -1.22
PRPF40A-207ENST00000471701 IER5Q5VY09 327 aa7.43□□□□□ -1.22
PRPF40A-207ENST00000471701 CD163Q86VB7 1156 aa7.43□□□□□ -1.22
PRPF40A-207ENST00000471701 MICALL1Q8N3F8 863 aa7.43□□□□□ -1.22
PRPF40A-207ENST00000471701 UBE2OQ9C0C9 1292 aaKnown RBP7.43□□□□□ -1.22
PRPF40A-207ENST00000471701 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
PRPF40A-207ENST00000471701 ADAM23O75077 832 aa7.42□□□□□ -1.22
PRPF40A-207ENST00000471701 TRIM28Q13263 835 aaKnown RBP7.42□□□□□ -1.22
PRPF40A-207ENST00000471701 CCINQ13939 588 aa7.42□□□□□ -1.22
PRPF40A-207ENST00000471701 CFAP70Q5T0N1 1121 aa7.42□□□□□ -1.22
PRPF40A-207ENST00000471701 MDFIQ99750 246 aa7.42□□□□□ -1.22
PRPF40A-207ENST00000471701 FOXO3O43524 673 aa7.41□□□□□ -1.22
PRPF40A-207ENST00000471701 APBA3O96018 575 aa7.41□□□□□ -1.22
PRPF40A-207ENST00000471701 ARXQ96QS3 562 aa7.41□□□□□ -1.22
PRPF40A-207ENST00000471701 GSX2Q9BZM3 304 aa7.41□□□□□ -1.22
PRPF40A-207ENST00000471701 PRDM6Q9NQX0 595 aa7.41□□□□□ -1.22
PRPF40A-207ENST00000471701 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.41□□□□□ -1.22
PRPF40A-207ENST00000471701 K7ELQ4 463 aaPredicted RBP7.4□□□□□ -1.22
PRPF40A-207ENST00000471701 LILRB5O75023 590 aa7.4□□□□□ -1.22
PRPF40A-207ENST00000471701 FURINP09958 794 aa7.4□□□□□ -1.22
PRPF40A-207ENST00000471701 WEE1P30291 646 aa7.4□□□□□ -1.22
PRPF40A-207ENST00000471701 C11orf91Q3C1V1 193 aa7.4□□□□□ -1.22
PRPF40A-207ENST00000471701 TRAPPC3LQ5T215 181 aa7.4□□□□□ -1.22
PRPF40A-207ENST00000471701 KLK14Q9P0G3 267 aa7.4□□□□□ -1.22
PRPF40A-207ENST00000471701 STARD13Q9Y3M8 1113 aa7.4□□□□□ -1.22
PRPF40A-207ENST00000471701 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
PRPF40A-207ENST00000471701 ALBP02768 609 aa7.39□□□□□ -1.23
PRPF40A-207ENST00000471701 CHRNA4P43681 627 aa7.39□□□□□ -1.23
PRPF40A-207ENST00000471701 GATA4P43694 442 aa7.39□□□□□ -1.23
PRPF40A-207ENST00000471701 DGKZQ13574 1117 aa7.39□□□□□ -1.23
PRPF40A-207ENST00000471701 C8orf86Q6ZUL3 223 aa7.39□□□□□ -1.23
PRPF40A-207ENST00000471701 KRTAP4-6Q9BYQ5 205 aa7.39□□□□□ -1.23
PRPF40A-207ENST00000471701 MICAL2O94851 1124 aa7.38□□□□□ -1.23
PRPF40A-207ENST00000471701 IDH3AP50213 366 aa7.38□□□□□ -1.23
PRPF40A-207ENST00000471701 PCSK7Q16549 785 aa7.38□□□□□ -1.23
PRPF40A-207ENST00000471701 NACC1Q96RE7 527 aa7.38□□□□□ -1.23
PRPF40A-207ENST00000471701 DMGDHQ9UI17 866 aaKnown RBP7.38□□□□□ -1.23
PRPF40A-207ENST00000471701 NOVA2Q9UNW9 492 aaKnown RBP7.38□□□□□ -1.23
PRPF40A-207ENST00000471701 BCS1LQ9Y276 419 aa7.38□□□□□ -1.23
PRPF40A-207ENST00000471701 NFKB1P19838 968 aa7.37□□□□□ -1.23
PRPF40A-207ENST00000471701 ARSDP51689 593 aa7.37□□□□□ -1.23
PRPF40A-207ENST00000471701 C20orf204Q6ZNR8 217 aa7.37□□□□□ -1.23
PRPF40A-207ENST00000471701 NUDT8Q8WV74 236 aa7.37□□□□□ -1.23
PRPF40A-207ENST00000471701 C11orf16Q9NQ32 467 aa7.37□□□□□ -1.23
PRPF40A-207ENST00000471701 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
PRPF40A-207ENST00000471701 SLC6A14Q9UN76 642 aa7.37□□□□□ -1.23
PRPF40A-207ENST00000471701 RGS9O75916 674 aaPredicted RBP7.36□□□□□ -1.23
PRPF40A-207ENST00000471701 INPP5BP32019 993 aa7.36□□□□□ -1.23
PRPF40A-207ENST00000471701 DOC2BQ14184 412 aa7.36□□□□□ -1.23
PRPF40A-207ENST00000471701 IFT43Q96FT9 208 aa7.36□□□□□ -1.23
PRPF40A-207ENST00000471701 JPH1Q9HDC5 661 aaPredicted RBP7.36□□□□□ -1.23
PRPF40A-207ENST00000471701 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 NID1P14543 1247 aa7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 ARID4AP29374 1257 aaPredicted RBP7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 COL9A3Q14050 684 aaPredicted RBP7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 SWI5Q1ZZU3 235 aa7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 KRT25Q7Z3Z0 450 aa7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 MYO19Q96H55 970 aa7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 PRIMPOLQ96LW4 560 aa7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 QTRT2Q9H974 415 aaKnown RBP7.35□□□□□ -1.23
PRPF40A-207ENST00000471701 TARSP26639 723 aaKnown RBP7.34□□□□□ -1.23
PRPF40A-207ENST00000471701 RAC1P63000 192 aa7.34□□□□□ -1.23
PRPF40A-207ENST00000471701 PSAPL1Q6NUJ1 521 aa7.34□□□□□ -1.23
PRPF40A-207ENST00000471701 FAM35AQ86V20 835 aa7.34□□□□□ -1.23
PRPF40A-207ENST00000471701 ZMYND15Q9H091 742 aa7.34□□□□□ -1.23
PRPF40A-207ENST00000471701 ACIN1Q9UKV3 1341 aaKnown RBP7.33□□□□□ -1.24
PRPF40A-207ENST00000471701 C9orf172C9J069 976 aa7.33□□□□□ -1.24
PRPF40A-207ENST00000471701 SASH3O75995 380 aa7.33□□□□□ -1.24
PRPF40A-207ENST00000471701 MAP3K6O95382 1288 aa7.33□□□□□ -1.24
PRPF40A-207ENST00000471701 RARAP10276 462 aa7.33□□□□□ -1.24
PRPF40A-207ENST00000471701 ELOAQ14241 798 aaKnown RBP7.33□□□□□ -1.24
PRPF40A-207ENST00000471701 GRIK4Q16099 956 aa7.33□□□□□ -1.24
PRPF40A-207ENST00000471701 CMTR1Q8N1G2 835 aaKnown RBP7.33□□□□□ -1.24
PRPF40A-207ENST00000471701 PRMT3O60678 531 aa7.32□□□□□ -1.24
PRPF40A-207ENST00000471701 CPB1P15086 417 aa7.32□□□□□ -1.24
PRPF40A-207ENST00000471701 ELMSAN1Q6PJG2 1045 aa7.32□□□□□ -1.24
PRPF40A-207ENST00000471701 DHX32Q7L7V1 743 aaKnown RBP7.32□□□□□ -1.24
PRPF40A-207ENST00000471701 SEMA6BQ9H3T3 888 aa7.32□□□□□ -1.24
PRPF40A-207ENST00000471701 RTCBQ9Y3I0 505 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms