RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 IL17REQ8NFR9 667 aa9.25□□□□□ -0.93
HDAC1-204ENST00000471488 GAS2L2Q8NHY3 880 aa9.25□□□□□ -0.93
HDAC1-204ENST00000471488 BCL2L13Q9BXK5 485 aa9.25□□□□□ -0.93
HDAC1-204ENST00000471488 EIF4G2P78344 907 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDAC1-204ENST00000471488 AOC3Q16853 763 aa9.24□□□□□ -0.93
HDAC1-204ENST00000471488 SAPCD2Q86UD0 394 aa9.24□□□□□ -0.93
HDAC1-204ENST00000471488 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
HDAC1-204ENST00000471488 BCORQ6W2J9 1755 aa9.23□□□□□ -0.93
HDAC1-204ENST00000471488 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
HDAC1-204ENST00000471488 GPTP24298 496 aa9.23□□□□□ -0.93
HDAC1-204ENST00000471488 BRPF1P55201 1214 aaPredicted RBP9.23□□□□□ -0.93
HDAC1-204ENST00000471488 HLFQ16534 295 aa9.23□□□□□ -0.93
HDAC1-204ENST00000471488 CLEC4GQ6UXB4 293 aa9.23□□□□□ -0.93
HDAC1-204ENST00000471488 PSMD1Q99460 953 aa9.23□□□□□ -0.93
HDAC1-204ENST00000471488 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
HDAC1-204ENST00000471488 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
HDAC1-204ENST00000471488 SNRPA1P09661 255 aaKnown RBP9.22□□□□□ -0.93
HDAC1-204ENST00000471488 GMPSP49915 693 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-204ENST00000471488 HUNKP57058 714 aa9.22□□□□□ -0.93
HDAC1-204ENST00000471488 RTF1Q92541 710 aaKnown RBP9.22□□□□□ -0.93
HDAC1-204ENST00000471488 RBM17Q96I25 401 aaKnown RBP9.22□□□□□ -0.93
HDAC1-204ENST00000471488 ZIC5Q96T25 663 aa9.22□□□□□ -0.93
HDAC1-204ENST00000471488 NYXQ9GZU5 481 aa9.22□□□□□ -0.93
HDAC1-204ENST00000471488 GPRC5DQ9NZD1 345 aa9.22□□□□□ -0.93
HDAC1-204ENST00000471488 TRPM7Q96QT4 1865 aa9.21□□□□□ -0.93
HDAC1-204ENST00000471488 THSD7BQ9C0I4 1608 aa9.21□□□□□ -0.93
HDAC1-204ENST00000471488 COL4A5P29400 1685 aa9.21□□□□□ -0.93
HDAC1-204ENST00000471488 TRPA1O75762 1119 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 RAD17O75943 681 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 MYL6BP14649 208 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 NOGQ13253 232 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 DLK2Q6UY11 383 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 KIF6Q6ZMV9 814 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 MCM10Q7L590 875 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 USP48Q86UV5 1035 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 RRP7AQ9Y3A4 280 aaKnown RBP9.21□□□□□ -0.94
HDAC1-204ENST00000471488 ABCC12Q96J65 1359 aa9.21□□□□□ -0.94
HDAC1-204ENST00000471488 TNRC18O15417 2968 aaPredicted RBP9.2□□□□□ -0.94
HDAC1-204ENST00000471488 DCTN1Q14203 1278 aa9.2□□□□□ -0.94
HDAC1-204ENST00000471488 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
HDAC1-204ENST00000471488 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
HDAC1-204ENST00000471488 PCGF6Q9BYE7 350 aa9.2□□□□□ -0.94
HDAC1-204ENST00000471488 ZBTB3Q9H5J0 574 aa9.2□□□□□ -0.94
HDAC1-204ENST00000471488 KLRG2A4D1S0 409 aaPredicted RBP9.19□□□□□ -0.94
HDAC1-204ENST00000471488 NBPF26B4DH59 902 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 PRKAR2BP31323 418 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
HDAC1-204ENST00000471488 CXCL9Q07325 125 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 PRPF38BQ5VTL8 546 aaKnown RBP9.19□□□□□ -0.94
HDAC1-204ENST00000471488 NBPF10Q6P3W6 841 aaKnown RBP9.19□□□□□ -0.94
HDAC1-204ENST00000471488 DPP8Q6V1X1 898 aaPredicted RBP9.19□□□□□ -0.94
HDAC1-204ENST00000471488 CDC37L1Q7L3B6 337 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 NBPF15Q8N660 670 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 TRPM4Q8TD43 1214 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 ZNRF3Q9ULT6 936 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 NPC1L1Q9UHC9 1359 aa9.19□□□□□ -0.94
HDAC1-204ENST00000471488 SHTN1A0MZ66 631 aa9.18□□□□□ -0.94
HDAC1-204ENST00000471488 H7C1D1 291 aa9.18□□□□□ -0.94
HDAC1-204ENST00000471488 KIF23Q02241 960 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-204ENST00000471488 AMER1Q5JTC6 1135 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-204ENST00000471488 C2orf69Q8N8R5 385 aa9.18□□□□□ -0.94
HDAC1-204ENST00000471488 ZNF428Q96B54 188 aa9.18□□□□□ -0.94
HDAC1-204ENST00000471488 PHACTR3Q96KR7 559 aa9.18□□□□□ -0.94
HDAC1-204ENST00000471488 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-204ENST00000471488 TNIP1Q15025 636 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 CRY2Q49AN0 593 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 TBC1D10BQ4KMP7 808 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-204ENST00000471488 GRIPAP1Q4V328 841 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 RGMBQ6NW40 437 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 C3orf67Q6ZVT6 689 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 MICALL2Q8IY33 904 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 SUPT20HQ8NEM7 779 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 CNOT7Q9UIV1 285 aaKnown RBP9.17□□□□□ -0.94
HDAC1-204ENST00000471488 HDAC9Q9UKV0 1011 aa9.17□□□□□ -0.94
HDAC1-204ENST00000471488 SIPA1L3O60292 1781 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-204ENST00000471488 ADM5C9JUS6 153 aa9.16□□□□□ -0.94
HDAC1-204ENST00000471488 SUSD4Q5VX71 490 aa9.16□□□□□ -0.94
HDAC1-204ENST00000471488 TTLL7Q6ZT98 887 aa9.16□□□□□ -0.94
HDAC1-204ENST00000471488 SAMD7Q7Z3H4 446 aa9.16□□□□□ -0.94
HDAC1-204ENST00000471488 KRT26Q7Z3Y9 468 aa9.16□□□□□ -0.94
HDAC1-204ENST00000471488 MPNDQ8N594 471 aa9.16□□□□□ -0.94
HDAC1-204ENST00000471488 DCPSQ96C86 337 aaKnown RBP9.16□□□□□ -0.94
HDAC1-204ENST00000471488 HHIPL1Q96JK4 782 aa9.16□□□□□ -0.94
HDAC1-204ENST00000471488 GBA2Q9HCG7 927 aaPredicted RBP9.16□□□□□ -0.94
HDAC1-204ENST00000471488 RNF186Q9NXI6 227 aa9.16□□□□□ -0.94
HDAC1-204ENST00000471488 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
HDAC1-204ENST00000471488 ZBTB12Q9Y330 459 aaPredicted RBP9.16□□□□□ -0.94
HDAC1-204ENST00000471488 MAP3K15Q6ZN16 1313 aa9.15□□□□□ -0.94
HDAC1-204ENST00000471488 UBN2Q6ZU65 1347 aa9.15□□□□□ -0.94
HDAC1-204ENST00000471488 RIMBP2O15034 1052 aa9.15□□□□□ -0.94
HDAC1-204ENST00000471488 U2AF1L5P0DN76 240 aaPredicted RBP9.15□□□□□ -0.94
HDAC1-204ENST00000471488 U2AF1Q01081 240 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC1-204ENST00000471488 PPP1R42Q7Z4L9 355 aa9.15□□□□□ -0.94
HDAC1-204ENST00000471488 CTU1Q7Z7A3 348 aaKnown RBP9.15□□□□□ -0.94
HDAC1-204ENST00000471488 CFAP53Q96M91 514 aa9.15□□□□□ -0.94
HDAC1-204ENST00000471488 CRAMP1Q96RY5 1269 aa9.15□□□□□ -0.94
HDAC1-204ENST00000471488 CEMIPQ8WUJ3 1361 aa9.14□□□□□ -0.95
HDAC1-204ENST00000471488 PDE4DIPQ5VU43 2346 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms