RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 GNAI3P08754 354 aa16.29■□□□□ 0.2
NPHP4-207ENST00000470763 ME3Q16798 604 aa16.29■□□□□ 0.2
NPHP4-207ENST00000470763 EIF4A2Q14240 407 aaKnown RBP16.28■□□□□ 0.2
NPHP4-207ENST00000470763 PRPF40BQ6NWY9 871 aaKnown RBP16.28■□□□□ 0.2
NPHP4-207ENST00000470763 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
NPHP4-207ENST00000470763 ILDR2Q71H61 639 aa16.28■□□□□ 0.2
NPHP4-207ENST00000470763 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
NPHP4-207ENST00000470763 SURF6O75683 361 aaKnown RBP16.28■□□□□ 0.2
NPHP4-207ENST00000470763 PTH1RQ03431 593 aa16.27■□□□□ 0.2
NPHP4-207ENST00000470763 TDRD7Q8NHU6 1098 aaKnown RBP16.27■□□□□ 0.2
NPHP4-207ENST00000470763 C19orf44Q9H6X5 657 aa16.27■□□□□ 0.2
NPHP4-207ENST00000470763 NR1I2O75469 434 aa16.27■□□□□ 0.19
NPHP4-207ENST00000470763 FLIIQ13045 1269 aa16.27■□□□□ 0.19
NPHP4-207ENST00000470763 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.27■□□□□ 0.19
NPHP4-207ENST00000470763 LRRC8AQ8IWT6 810 aa16.27■□□□□ 0.19
NPHP4-207ENST00000470763 STK31Q9BXU1 1019 aa16.27■□□□□ 0.19
NPHP4-207ENST00000470763 ATP7BP35670 1465 aa16.27■□□□□ 0.19
NPHP4-207ENST00000470763 COL9A3Q14050 684 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-207ENST00000470763 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 SPATA32Q96LK8 384 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 FILIP1Q7Z7B0 1213 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 MED1Q15648 1581 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-207ENST00000470763 EPB41L2O43491 1005 aaKnown RBP16.26■□□□□ 0.19
NPHP4-207ENST00000470763 SKILP12757 684 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 ZNF446Q9NWS9 450 aa16.26■□□□□ 0.19
NPHP4-207ENST00000470763 SOS1Q07889 1333 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-207ENST00000470763 SOX12O15370 315 aa16.25■□□□□ 0.19
NPHP4-207ENST00000470763 USP16Q9Y5T5 823 aa16.25■□□□□ 0.19
NPHP4-207ENST00000470763 CYP46A1Q9Y6A2 500 aa16.25■□□□□ 0.19
NPHP4-207ENST00000470763 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
NPHP4-207ENST00000470763 IPO4Q8TEX9 1081 aaKnown RBP16.25■□□□□ 0.19
NPHP4-207ENST00000470763 SYTL4Q96C24 671 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-207ENST00000470763 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
NPHP4-207ENST00000470763 ERBB3P21860 1342 aa16.25■□□□□ 0.19
NPHP4-207ENST00000470763 AOX1Q06278 1338 aa16.25■□□□□ 0.19
NPHP4-207ENST00000470763 EDC4Q6P2E9 1401 aaKnown RBP16.24■□□□□ 0.19
NPHP4-207ENST00000470763 CAPN2P17655 700 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 VPS53Q5VIR6 699 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 CLSTN2Q9H4D0 955 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 AATKQ6ZMQ8 1374 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 CRB1P82279 1406 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 A0A087WWV3 80 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 RHPN1Q8TCX5 695 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 SH2B1Q9NRF2 756 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-207ENST00000470763 CCDC171Q6TFL3 1326 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-207ENST00000470763 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
NPHP4-207ENST00000470763 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 ERO1AQ96HE7 468 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 ZSCAN31Q96LW9 406 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-207ENST00000470763 DDX19AQ9NUU7 478 aaKnown RBP16.23■□□□□ 0.19
NPHP4-207ENST00000470763 CALCOCO1Q9P1Z2 691 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 ELP1O95163 1332 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 TTC21AQ8NDW8 1320 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 ROBO2Q9HCK4 1378 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 GOLGA6L19H0YKK7 550 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 USP44Q9H0E7 712 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 FAM53CQ9NYF3 392 aa16.23■□□□□ 0.19
NPHP4-207ENST00000470763 C11orf57Q6ZUT1 292 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-207ENST00000470763 LEO1Q8WVC0 666 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-207ENST00000470763 NOL10Q9BSC4 688 aaKnown RBP16.22■□□□□ 0.19
NPHP4-207ENST00000470763 NPHP3Q7Z494 1330 aa16.22■□□□□ 0.19
NPHP4-207ENST00000470763 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
NPHP4-207ENST00000470763 ERCC6LQ2NKX8 1250 aa16.22■□□□□ 0.19
NPHP4-207ENST00000470763 SLU7O95391 586 aaKnown RBP16.22■□□□□ 0.19
NPHP4-207ENST00000470763 ATF3P18847 181 aa16.22■□□□□ 0.19
NPHP4-207ENST00000470763 STK3Q13188 491 aa16.22■□□□□ 0.19
NPHP4-207ENST00000470763 HSP90AB2PQ58FF8 381 aa16.22■□□□□ 0.19
NPHP4-207ENST00000470763 LRRN4CLQ8ND94 238 aa16.22■□□□□ 0.19
NPHP4-207ENST00000470763 ZSWIM6Q9HCJ5 1215 aa16.22■□□□□ 0.19
NPHP4-207ENST00000470763 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
NPHP4-207ENST00000470763 LARP1Q6PKG0 1096 aaKnown RBP16.21■□□□□ 0.19
NPHP4-207ENST00000470763 PGBD1Q96JS3 809 aa16.21■□□□□ 0.19
NPHP4-207ENST00000470763 NALCNQ8IZF0 1738 aa16.21■□□□□ 0.19
NPHP4-207ENST00000470763 SCAND2PQ9GZW5 306 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-207ENST00000470763 DCCP43146 1447 aa16.2■□□□□ 0.18
NPHP4-207ENST00000470763 RBM43Q6ZSC3 357 aaKnown RBP16.2■□□□□ 0.18
NPHP4-207ENST00000470763 SSH3Q8TE77 659 aa16.2■□□□□ 0.18
NPHP4-207ENST00000470763 FBXW7Q969H0 707 aa16.2■□□□□ 0.18
NPHP4-207ENST00000470763 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
NPHP4-207ENST00000470763 HNRNPH2P55795 449 aaKnown RBP16.2■□□□□ 0.18
NPHP4-207ENST00000470763 CEBPZQ03701 1054 aaKnown RBP16.2■□□□□ 0.18
NPHP4-207ENST00000470763 ADGRL3Q9HAR2 1447 aa16.2■□□□□ 0.18
NPHP4-207ENST00000470763 PDIA4P13667 645 aaKnown RBP16.2■□□□□ 0.18
NPHP4-207ENST00000470763 CCZ1BP86790 482 aa16.2■□□□□ 0.18
NPHP4-207ENST00000470763 CCZ1P86791 482 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-207ENST00000470763 CCAR2Q8N163 923 aaKnown RBP16.2■□□□□ 0.18
NPHP4-207ENST00000470763 DNAJC2Q99543 621 aaKnown RBP16.2■□□□□ 0.18
NPHP4-207ENST00000470763 MTHFSDQ2M296 383 aaKnown RBP16.19■□□□□ 0.18
NPHP4-207ENST00000470763 KIF1BPQ96EK5 621 aa16.19■□□□□ 0.18
NPHP4-207ENST00000470763 TRIM34Q9BYJ4 488 aa16.19■□□□□ 0.18
NPHP4-207ENST00000470763 CDC25BP30305 580 aa16.19■□□□□ 0.18
NPHP4-207ENST00000470763 IQCB1Q15051 598 aa16.19■□□□□ 0.18
NPHP4-207ENST00000470763 MST1RQ04912 1400 aa16.19■□□□□ 0.18
NPHP4-207ENST00000470763 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms