RNA–Protein interactions for RNA: ENST00000470359.2

SUPT20H-208, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 792 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-208ENST00000470359 TAF1DQ9H5J8 278 aaPredicted RBP25.83■■□□□ 1.73
SUPT20H-208ENST00000470359 LAMB2P55268 1798 aa25.82■■□□□ 1.72
SUPT20H-208ENST00000470359 ALDH1B1P30837 517 aa25.82■■□□□ 1.72
SUPT20H-208ENST00000470359 IARSP41252 1262 aaKnown RBP25.82■■□□□ 1.72
SUPT20H-208ENST00000470359 GIGYF2Q6Y7W6 1299 aaKnown RBP25.82■■□□□ 1.72
SUPT20H-208ENST00000470359 RTKN2Q8IZC4 609 aa25.82■■□□□ 1.72
SUPT20H-208ENST00000470359 PNNQ9H307 717 aaKnown RBP25.82■■□□□ 1.72
SUPT20H-208ENST00000470359 ERBB4Q15303 1308 aa25.82■■□□□ 1.72
SUPT20H-208ENST00000470359 LTBP1Q14766 1721 aa25.81■■□□□ 1.72
SUPT20H-208ENST00000470359 TCERG1O14776 1098 aaKnown RBP25.8■■□□□ 1.72
SUPT20H-208ENST00000470359 RNF123Q5XPI4 1314 aa25.8■■□□□ 1.72
SUPT20H-208ENST00000470359 HOXA10P31260 410 aaPredicted RBP25.79■■□□□ 1.72
SUPT20H-208ENST00000470359 NEUROD2Q15784 382 aa25.79■■□□□ 1.72
SUPT20H-208ENST00000470359 RPGRQ92834 1020 aaKnown RBP25.79■■□□□ 1.72
SUPT20H-208ENST00000470359 FZD9O00144 591 aa25.78■■□□□ 1.72
SUPT20H-208ENST00000470359 ZNF428Q96B54 188 aa25.78■■□□□ 1.72
SUPT20H-208ENST00000470359 MYBBP1AQ9BQG0 1328 aaKnown RBP25.78■■□□□ 1.72
SUPT20H-208ENST00000470359 IQCA1LA6NCM1 817 aa25.77■■□□□ 1.72
SUPT20H-208ENST00000470359 HSPA1AP0DMV8 641 aaKnown RBP25.77■■□□□ 1.72
SUPT20H-208ENST00000470359 HSPA1BP0DMV9 641 aaKnown RBP25.77■■□□□ 1.72
SUPT20H-208ENST00000470359 EAPPQ56P03 285 aaPredicted RBP25.77■■□□□ 1.72
SUPT20H-208ENST00000470359 LDHDQ86WU2 507 aa25.77■■□□□ 1.72
SUPT20H-208ENST00000470359 PSMD1Q99460 953 aa25.77■■□□□ 1.72
SUPT20H-208ENST00000470359 MKRN1Q9UHC7 482 aaKnown RBP25.77■■□□□ 1.72
SUPT20H-208ENST00000470359 PASKQ96RG2 1323 aa25.77■■□□□ 1.72
SUPT20H-208ENST00000470359 TRIM35Q9UPQ4 493 aa25.76■■□□□ 1.71
SUPT20H-208ENST00000470359 TAF1P21675 1872 aa25.76■■□□□ 1.71
SUPT20H-208ENST00000470359 PPEF1O14829 653 aaPredicted RBP25.75■■□□□ 1.71
SUPT20H-208ENST00000470359 XAGE3Q8WTP9 111 aa25.75■■□□□ 1.71
SUPT20H-208ENST00000470359 CREBZFQ9NS37 354 aa25.75■■□□□ 1.71
SUPT20H-208ENST00000470359 HACL1Q9UJ83 578 aa25.75■■□□□ 1.71
SUPT20H-208ENST00000470359 EPHX2P34913 555 aa25.74■■□□□ 1.71
SUPT20H-208ENST00000470359 AIMP1Q12904 312 aaKnown RBP25.74■■□□□ 1.71
SUPT20H-208ENST00000470359 COPS6Q7L5N1 327 aa25.74■■□□□ 1.71
SUPT20H-208ENST00000470359 CRAMP1Q96RY5 1269 aa25.74■■□□□ 1.71
SUPT20H-208ENST00000470359 RBM17Q96I25 401 aaKnown RBP25.73■■□□□ 1.71
SUPT20H-208ENST00000470359 ITGBL1O95965 494 aaPredicted RBP25.72■■□□□ 1.71
SUPT20H-208ENST00000470359 LMOD3Q0VAK6 560 aa25.72■■□□□ 1.71
SUPT20H-208ENST00000470359 PARP10Q53GL7 1025 aa25.72■■□□□ 1.71
SUPT20H-208ENST00000470359 PPP1R42Q7Z4L9 355 aa25.72■■□□□ 1.71
SUPT20H-208ENST00000470359 UTP14AQ9BVJ6 771 aaKnown RBP25.72■■□□□ 1.71
SUPT20H-208ENST00000470359 BABAM1Q9NWV8 329 aa25.72■■□□□ 1.71
SUPT20H-208ENST00000470359 LAS1LQ9Y4W2 734 aaKnown RBP25.72■■□□□ 1.71
SUPT20H-208ENST00000470359 ABCC4O15439 1325 aa25.71■■□□□ 1.71
SUPT20H-208ENST00000470359 CHL1O00533 1208 aa25.71■■□□□ 1.71
SUPT20H-208ENST00000470359 NLRP10Q86W26 655 aa25.71■■□□□ 1.71
SUPT20H-208ENST00000470359 GJA3Q9Y6H8 435 aa25.71■■□□□ 1.71
SUPT20H-208ENST00000470359 HCLS1P14317 486 aaPredicted RBP25.7■■□□□ 1.7
SUPT20H-208ENST00000470359 MAP1SQ66K74 1059 aaPredicted RBP25.7■■□□□ 1.7
SUPT20H-208ENST00000470359 GPC2Q8N158 579 aa25.7■■□□□ 1.7
SUPT20H-208ENST00000470359 CHPF2Q9P2E5 772 aa25.7■■□□□ 1.7
SUPT20H-208ENST00000470359 COL4A1P02462 1669 aa25.7■■□□□ 1.7
SUPT20H-208ENST00000470359 DDX60Q8IY21 1712 aaKnown RBP25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 SLC10A5Q5PT55 438 aa25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 CC2D2BQ6DHV5 1058 aa25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 LARGE2Q8N3Y3 721 aa25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 JDP2Q8WYK2 163 aa25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 RUNDC1Q96C34 613 aa25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 ADAMTS8Q9UP79 889 aa25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 CLEC11AQ9Y240 323 aa25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 CNTNAP1P78357 1384 aa25.69■■□□□ 1.7
SUPT20H-208ENST00000470359 NLRP3Q96P20 1036 aa25.68■■□□□ 1.7
SUPT20H-208ENST00000470359 SCNN1DP51172 638 aa25.67■■□□□ 1.7
SUPT20H-208ENST00000470359 AOC3Q16853 763 aa25.67■■□□□ 1.7
SUPT20H-208ENST00000470359 DDX21Q9NR30 783 aaKnown RBP eCLIP25.67■■□□□ 1.7
SUPT20H-208ENST00000470359 FMR1Q06787 632 aaKnown RBP eCLIP25.66■■□□□ 1.7
SUPT20H-208ENST00000470359 ATP6V0A2Q9Y487 856 aa25.66■■□□□ 1.7
SUPT20H-208ENST00000470359 EPS15P42566 896 aa25.65■■□□□ 1.7
SUPT20H-208ENST00000470359 EIF6P56537 245 aaKnown RBP25.65■■□□□ 1.7
SUPT20H-208ENST00000470359 TCIRG1Q13488 830 aa25.65■■□□□ 1.7
SUPT20H-208ENST00000470359 WDR43Q15061 677 aaKnown RBP eCLIP25.65■■□□□ 1.7
SUPT20H-208ENST00000470359 DUOX1Q9NRD9 1551 aa25.65■■□□□ 1.7
SUPT20H-208ENST00000470359 PPIP5K2O43314 1243 aa25.64■■□□□ 1.7
SUPT20H-208ENST00000470359 CNTROBQ8N137 903 aa25.64■■□□□ 1.7
SUPT20H-208ENST00000470359 CAPN15O75808 1086 aa25.63■■□□□ 1.69
SUPT20H-208ENST00000470359 HDGFL1Q5TGJ6 251 aa25.63■■□□□ 1.69
SUPT20H-208ENST00000470359 TNS4Q8IZW8 715 aa25.63■■□□□ 1.69
SUPT20H-208ENST00000470359 TRMT112Q9UI30 125 aaKnown RBP25.63■■□□□ 1.69
SUPT20H-208ENST00000470359 TMEM88BA6NKF7 163 aa25.62■■□□□ 1.69
SUPT20H-208ENST00000470359 VEGFBP49765 207 aa25.62■■□□□ 1.69
SUPT20H-208ENST00000470359 HSP90AB3PQ58FF7 597 aa25.62■■□□□ 1.69
SUPT20H-208ENST00000470359 PNMA8AQ86V59 439 aaPredicted RBP25.62■■□□□ 1.69
SUPT20H-208ENST00000470359 NIM1KQ8IY84 436 aa25.62■■□□□ 1.69
SUPT20H-208ENST00000470359 LRRC37AA6NMS7 1700 aa25.62■■□□□ 1.69
SUPT20H-208ENST00000470359 ATP5J2-PTCD1G3V325 749 aa25.6■■□□□ 1.69
SUPT20H-208ENST00000470359 MBIPQ9NS73 344 aa25.6■■□□□ 1.69
SUPT20H-208ENST00000470359 SH3TC1Q8TE82 1336 aa25.6■■□□□ 1.69
SUPT20H-208ENST00000470359 GRIPAP1Q4V328 841 aa25.59■■□□□ 1.69
SUPT20H-208ENST00000470359 RTFDC1Q9BY42 306 aaPredicted RBP25.59■■□□□ 1.69
SUPT20H-208ENST00000470359 PRKRIP1Q9H875 184 aaPredicted RBP25.59■■□□□ 1.69
SUPT20H-208ENST00000470359 FOXN1O15353 648 aa25.58■■□□□ 1.69
SUPT20H-208ENST00000470359 LMOD1P29536 600 aaPredicted RBP25.58■■□□□ 1.69
SUPT20H-208ENST00000470359 DUSP27Q5VZP5 1158 aa25.58■■□□□ 1.69
SUPT20H-208ENST00000470359 CXCL9Q07325 125 aa25.57■■□□□ 1.68
SUPT20H-208ENST00000470359 GRAPQ13588 217 aa25.57■■□□□ 1.68
SUPT20H-208ENST00000470359 DPP8Q6V1X1 898 aaPredicted RBP25.57■■□□□ 1.68
SUPT20H-208ENST00000470359 PLBD2Q8NHP8 589 aa25.57■■□□□ 1.68
SUPT20H-208ENST00000470359 GRAPLQ8TC17 118 aaPredicted RBP25.57■■□□□ 1.68
SUPT20H-208ENST00000470359 ISCA1Q9BUE6 129 aa25.57■■□□□ 1.68
SUPT20H-208ENST00000470359 TRAF5O00463 557 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms