RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 RBM17Q96I25 401 aaKnown RBP19.86■□□□□ 0.77
FDPS-208ENST00000470171 CRAMP1Q96RY5 1269 aa19.86■□□□□ 0.77
FDPS-208ENST00000470171 TMX4Q9H1E5 349 aaPredicted RBP19.86■□□□□ 0.77
FDPS-208ENST00000470171 ELL2O00472 640 aaPredicted RBP19.85■□□□□ 0.77
FDPS-208ENST00000470171 CCDC93Q567U6 631 aa19.85■□□□□ 0.77
FDPS-208ENST00000470171 ISCA1Q9BUE6 129 aa19.85■□□□□ 0.77
FDPS-208ENST00000470171 TRMT112Q9UI30 125 aaKnown RBP19.85■□□□□ 0.77
FDPS-208ENST00000470171 KDM2BQ8NHM5 1336 aa19.84■□□□□ 0.77
FDPS-208ENST00000470171 C21orf2O43822 256 aa19.84■□□□□ 0.77
FDPS-208ENST00000470171 NUTM1Q86Y26 1132 aa19.84■□□□□ 0.77
FDPS-208ENST00000470171 TAOK3Q9H2K8 898 aa19.84■□□□□ 0.77
FDPS-208ENST00000470171 RNF181Q9P0P0 153 aa19.84■□□□□ 0.77
FDPS-208ENST00000470171 AFDNP55196 1824 aaKnown RBP19.83■□□□□ 0.77
FDPS-208ENST00000470171 N4BP2Q86UW6 1770 aaPredicted RBP19.83■□□□□ 0.77
FDPS-208ENST00000470171 C7orf43Q8WVR3 580 aa19.83■□□□□ 0.77
FDPS-208ENST00000470171 TSR2Q969E8 191 aaKnown RBP19.83■□□□□ 0.77
FDPS-208ENST00000470171 FANCIQ9NVI1 1328 aa19.82■□□□□ 0.76
FDPS-208ENST00000470171 TMC4Q7Z404 712 aa19.82■□□□□ 0.76
FDPS-208ENST00000470171 CCDC191Q8NCU4 936 aa19.82■□□□□ 0.76
FDPS-208ENST00000470171 BBOX1O75936 387 aa19.81■□□□□ 0.76
FDPS-208ENST00000470171 NEXNQ0ZGT2 675 aa19.81■□□□□ 0.76
FDPS-208ENST00000470171 TSPYL6Q8N831 410 aa19.81■□□□□ 0.76
FDPS-208ENST00000470171 DPY19L2Q6NUT2 758 aa19.8■□□□□ 0.76
FDPS-208ENST00000470171 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
FDPS-208ENST00000470171 VPS33BQ9H267 617 aa19.8■□□□□ 0.76
FDPS-208ENST00000470171 ARFGEF1Q9Y6D6 1849 aa19.8■□□□□ 0.76
FDPS-208ENST00000470171 BRCA1P38398 1863 aaKnown RBP19.79■□□□□ 0.76
FDPS-208ENST00000470171 NFKBIEO00221 500 aa19.79■□□□□ 0.76
FDPS-208ENST00000470171 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
FDPS-208ENST00000470171 FKBP4Q02790 459 aaKnown RBP eCLIP19.79■□□□□ 0.76
FDPS-208ENST00000470171 ZBTB38Q8NAP3 1195 aaPredicted RBP19.79■□□□□ 0.76
FDPS-208ENST00000470171 ZNF428Q96B54 188 aa19.79■□□□□ 0.76
FDPS-208ENST00000470171 PSMD1Q99460 953 aa19.79■□□□□ 0.76
FDPS-208ENST00000470171 METTL22Q9BUU2 404 aaPredicted RBP19.79■□□□□ 0.76
FDPS-208ENST00000470171 PHAXQ9H814 394 aaKnown RBP19.79■□□□□ 0.76
FDPS-208ENST00000470171 ABCC12Q96J65 1359 aa19.79■□□□□ 0.76
FDPS-208ENST00000470171 ZNF521Q96K83 1311 aa19.78■□□□□ 0.76
FDPS-208ENST00000470171 E9PSI1 815 aa19.78■□□□□ 0.76
FDPS-208ENST00000470171 VAMP4O75379 141 aa19.78■□□□□ 0.76
FDPS-208ENST00000470171 DDX46Q7L014 1031 aaKnown RBP19.78■□□□□ 0.76
FDPS-208ENST00000470171 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
FDPS-208ENST00000470171 DLEC1Q9Y238 1755 aa19.78■□□□□ 0.76
FDPS-208ENST00000470171 C1QTNF8P60827 252 aa19.77■□□□□ 0.76
FDPS-208ENST00000470171 SF3B3Q15393 1217 aaKnown RBP19.77■□□□□ 0.76
FDPS-208ENST00000470171 CWC25Q9NXE8 425 aaPredicted RBP19.77■□□□□ 0.76
FDPS-208ENST00000470171 GLTPD2A6NH11 291 aa19.75■□□□□ 0.75
FDPS-208ENST00000470171 PCCAP05165 728 aaPredicted RBP19.75■□□□□ 0.75
FDPS-208ENST00000470171 RASSF7Q02833 373 aa19.75■□□□□ 0.75
FDPS-208ENST00000470171 EXOSC9Q06265 439 aaKnown RBP19.75■□□□□ 0.75
FDPS-208ENST00000470171 SUPT20HQ8NEM7 779 aa19.75■□□□□ 0.75
FDPS-208ENST00000470171 PI4KAP2A4QPH2 592 aa19.74■□□□□ 0.75
FDPS-208ENST00000470171 ATP5J2-PTCD1G3V325 749 aa19.74■□□□□ 0.75
FDPS-208ENST00000470171 PPEF1O14829 653 aaPredicted RBP19.74■□□□□ 0.75
FDPS-208ENST00000470171 PI4KAP1Q8N8J0 262 aa19.74■□□□□ 0.75
FDPS-208ENST00000470171 MYD88Q99836 296 aa19.74■□□□□ 0.75
FDPS-208ENST00000470171 ZNF219Q9P2Y4 722 aaPredicted RBP19.74■□□□□ 0.75
FDPS-208ENST00000470171 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
FDPS-208ENST00000470171 ATP6V0A2Q9Y487 856 aa19.74■□□□□ 0.75
FDPS-208ENST00000470171 ANKRD31Q8N7Z5 1873 aa19.73■□□□□ 0.75
FDPS-208ENST00000470171 IRS4O14654 1257 aaPredicted RBP19.73■□□□□ 0.75
FDPS-208ENST00000470171 FLIIQ13045 1269 aa19.73■□□□□ 0.75
FDPS-208ENST00000470171 GRAPQ13588 217 aa19.73■□□□□ 0.75
FDPS-208ENST00000470171 SP8Q8IXZ3 490 aa19.73■□□□□ 0.75
FDPS-208ENST00000470171 GRAPLQ8TC17 118 aaPredicted RBP19.73■□□□□ 0.75
FDPS-208ENST00000470171 NUP98P52948 1817 aa19.73■□□□□ 0.75
FDPS-208ENST00000470171 TOMM70O94826 608 aa19.72■□□□□ 0.75
FDPS-208ENST00000470171 CT47B1P0C2W7 299 aaPredicted RBP19.72■□□□□ 0.75
FDPS-208ENST00000470171 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
FDPS-208ENST00000470171 DIEXFQ68CQ4 756 aaKnown RBP19.72■□□□□ 0.75
FDPS-208ENST00000470171 C16orf71Q8IYS4 520 aaPredicted RBP19.72■□□□□ 0.75
FDPS-208ENST00000470171 ZNF526Q8TF50 670 aaPredicted RBP19.72■□□□□ 0.75
FDPS-208ENST00000470171 FAM89AQ96GI7 184 aa19.72■□□□□ 0.75
FDPS-208ENST00000470171 CDHR2Q9BYE9 1310 aa19.72■□□□□ 0.75
FDPS-208ENST00000470171 FKBP5Q13451 457 aaPredicted RBP19.71■□□□□ 0.75
FDPS-208ENST00000470171 JDP2Q8WYK2 163 aa19.71■□□□□ 0.75
FDPS-208ENST00000470171 KIF3CO14782 793 aa19.7■□□□□ 0.74
FDPS-208ENST00000470171 PDE8AO60658 829 aa19.7■□□□□ 0.74
FDPS-208ENST00000470171 VEGFAP15692 232 aaPredicted RBP19.7■□□□□ 0.74
FDPS-208ENST00000470171 CCDC152Q4G0S7 254 aa19.7■□□□□ 0.74
FDPS-208ENST00000470171 SYNE4Q8N205 404 aa19.7■□□□□ 0.74
FDPS-208ENST00000470171 LINS1Q8NG48 757 aa19.7■□□□□ 0.74
FDPS-208ENST00000470171 ABCC4O15439 1325 aa19.7■□□□□ 0.74
FDPS-208ENST00000470171 IARSP41252 1262 aaKnown RBP19.69■□□□□ 0.74
FDPS-208ENST00000470171 DNAAF4Q8WXU2 420 aa19.69■□□□□ 0.74
FDPS-208ENST00000470171 RTFDC1Q9BY42 306 aaPredicted RBP19.69■□□□□ 0.74
FDPS-208ENST00000470171 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
FDPS-208ENST00000470171 C3orf67Q6ZVT6 689 aa19.68■□□□□ 0.74
FDPS-208ENST00000470171 RBM46Q8TBY0 533 aaKnown RBP19.68■□□□□ 0.74
FDPS-208ENST00000470171 COL11A2P13942 1736 aaPredicted RBP19.68■□□□□ 0.74
FDPS-208ENST00000470171 SENP3-EIF4A1A0A087X0R7 540 aa19.67■□□□□ 0.74
FDPS-208ENST00000470171 IQCA1LA6NCM1 817 aa19.67■□□□□ 0.74
FDPS-208ENST00000470171 NEURL1BA8MQ27 555 aa19.67■□□□□ 0.74
FDPS-208ENST00000470171 PRELPP51888 382 aa19.67■□□□□ 0.74
FDPS-208ENST00000470171 SLFN5Q08AF3 891 aa19.67■□□□□ 0.74
FDPS-208ENST00000470171 FSTL1Q12841 308 aa19.67■□□□□ 0.74
FDPS-208ENST00000470171 IGKV5-2P06315 115 aa19.66■□□□□ 0.74
FDPS-208ENST00000470171 DPP8Q6V1X1 898 aaPredicted RBP19.66■□□□□ 0.74
FDPS-208ENST00000470171 MPNDQ8N594 471 aa19.66■□□□□ 0.74
FDPS-208ENST00000470171 H7C1W4 665 aa19.65■□□□□ 0.74
FDPS-208ENST00000470171 FZD9O00144 591 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms