RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 BCAR3O75815 825 aa16■□□□□ 0.15
SPTLC1-204ENST00000469778 BEND3Q5T5X7 828 aa16■□□□□ 0.15
SPTLC1-204ENST00000469778 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
SPTLC1-204ENST00000469778 ATF7IPQ6VMQ6 1270 aa16■□□□□ 0.15
SPTLC1-204ENST00000469778 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
SPTLC1-204ENST00000469778 TRMT112Q9UI30 125 aaKnown RBP16■□□□□ 0.15
SPTLC1-204ENST00000469778 HDAC5Q9UQL6 1122 aa16■□□□□ 0.15
SPTLC1-204ENST00000469778 NEURL1BA8MQ27 555 aa15.99■□□□□ 0.15
SPTLC1-204ENST00000469778 ATP5J2-PTCD1G3V325 749 aa15.99■□□□□ 0.15
SPTLC1-204ENST00000469778 NTSR2O95665 410 aa15.99■□□□□ 0.15
SPTLC1-204ENST00000469778 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
SPTLC1-204ENST00000469778 GCKRQ14397 625 aa15.99■□□□□ 0.15
SPTLC1-204ENST00000469778 SRCIN1Q9C0H9 1055 aa15.99■□□□□ 0.15
SPTLC1-204ENST00000469778 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
SPTLC1-204ENST00000469778 PCCAP05165 728 aaPredicted RBP15.98■□□□□ 0.15
SPTLC1-204ENST00000469778 RIC1Q4ADV7 1423 aa15.98■□□□□ 0.15
SPTLC1-204ENST00000469778 PXDNLA1KZ92 1463 aa15.97■□□□□ 0.15
SPTLC1-204ENST00000469778 C10orf71Q711Q0 1435 aa15.97■□□□□ 0.15
SPTLC1-204ENST00000469778 F6X3S4 739 aa15.97■□□□□ 0.15
SPTLC1-204ENST00000469778 SLC4A10Q6U841 1118 aa15.97■□□□□ 0.15
SPTLC1-204ENST00000469778 FRAT1Q92837 279 aaPredicted RBP15.97■□□□□ 0.15
SPTLC1-204ENST00000469778 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
SPTLC1-204ENST00000469778 SYT17Q9BSW7 474 aa15.97■□□□□ 0.15
SPTLC1-204ENST00000469778 FHDC1Q9C0D6 1143 aaPredicted RBP15.97■□□□□ 0.15
SPTLC1-204ENST00000469778 CDHR2Q9BYE9 1310 aa15.96■□□□□ 0.15
SPTLC1-204ENST00000469778 H0YIN7 160 aa15.96■□□□□ 0.15
SPTLC1-204ENST00000469778 H7C1W4 665 aa15.96■□□□□ 0.15
SPTLC1-204ENST00000469778 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.15
SPTLC1-204ENST00000469778 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.15
SPTLC1-204ENST00000469778 ARFGEF2Q9Y6D5 1785 aa15.95■□□□□ 0.14
SPTLC1-204ENST00000469778 TRIM27P14373 513 aa15.95■□□□□ 0.14
SPTLC1-204ENST00000469778 ERFEQ4G0M1 354 aa15.95■□□□□ 0.14
SPTLC1-204ENST00000469778 C9orf78Q9NZ63 289 aaPredicted RBP15.95■□□□□ 0.14
SPTLC1-204ENST00000469778 ABCC4O15439 1325 aa15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 FAM177BA6PVY3 158 aa15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 GRM8O00222 908 aa15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 IRS4O14654 1257 aaPredicted RBP15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 PDE3AQ14432 1141 aa15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 CWF19L2Q2TBE0 894 aaKnown RBP15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 CRY2Q49AN0 593 aa15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 DZIP1LQ8IYY4 767 aaKnown RBP15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 FAM89AQ96GI7 184 aa15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 CHMP4BQ9H444 224 aaKnown RBP15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 ANKRD36CQ5JPF3 1778 aa15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 UTYO14607 1347 aa15.94■□□□□ 0.14
SPTLC1-204ENST00000469778 PDE8AO60658 829 aa15.93■□□□□ 0.14
SPTLC1-204ENST00000469778 HOXA10P31260 410 aaPredicted RBP15.93■□□□□ 0.14
SPTLC1-204ENST00000469778 STYK1Q6J9G0 422 aa15.93■□□□□ 0.14
SPTLC1-204ENST00000469778 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
SPTLC1-204ENST00000469778 FTSJ3Q8IY81 847 aaKnown RBP15.93■□□□□ 0.14
SPTLC1-204ENST00000469778 PLA2G12BQ9BX93 195 aa15.93■□□□□ 0.14
SPTLC1-204ENST00000469778 SRGNP10124 158 aa15.92■□□□□ 0.14
SPTLC1-204ENST00000469778 NPR1P16066 1061 aa15.92■□□□□ 0.14
SPTLC1-204ENST00000469778 ALDH1B1P30837 517 aa15.92■□□□□ 0.14
SPTLC1-204ENST00000469778 SF3B3Q15393 1217 aaKnown RBP15.92■□□□□ 0.14
SPTLC1-204ENST00000469778 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
SPTLC1-204ENST00000469778 CNKSR1Q969H4 720 aa15.92■□□□□ 0.14
SPTLC1-204ENST00000469778 MASTLQ96GX5 879 aa15.92■□□□□ 0.14
SPTLC1-204ENST00000469778 PIM2Q9P1W9 311 aa15.92■□□□□ 0.14
SPTLC1-204ENST00000469778 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
SPTLC1-204ENST00000469778 CRAMP1Q96RY5 1269 aa15.91■□□□□ 0.14
SPTLC1-204ENST00000469778 KIF13BQ9NQT8 1826 aa15.91■□□□□ 0.14
SPTLC1-204ENST00000469778 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
SPTLC1-204ENST00000469778 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
SPTLC1-204ENST00000469778 GNAI3P08754 354 aa15.9■□□□□ 0.14
SPTLC1-204ENST00000469778 DPEP1P16444 411 aa15.9■□□□□ 0.14
SPTLC1-204ENST00000469778 UBE3BQ7Z3V4 1068 aa15.9■□□□□ 0.14
SPTLC1-204ENST00000469778 RPGRQ92834 1020 aaKnown RBP15.9■□□□□ 0.14
SPTLC1-204ENST00000469778 USP44Q9H0E7 712 aa15.9■□□□□ 0.14
SPTLC1-204ENST00000469778 A0A0G2JLW4 131 aa15.89■□□□□ 0.13
SPTLC1-204ENST00000469778 CASP7P55210 303 aa15.89■□□□□ 0.13
SPTLC1-204ENST00000469778 CCDC152Q4G0S7 254 aa15.89■□□□□ 0.13
SPTLC1-204ENST00000469778 GRIPAP1Q4V328 841 aa15.89■□□□□ 0.13
SPTLC1-204ENST00000469778 TTLL6Q8N841 843 aa15.89■□□□□ 0.13
SPTLC1-204ENST00000469778 RBM17Q96I25 401 aaKnown RBP15.89■□□□□ 0.13
SPTLC1-204ENST00000469778 BBOX1O75936 387 aa15.88■□□□□ 0.13
SPTLC1-204ENST00000469778 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
SPTLC1-204ENST00000469778 KCNA3P22001 575 aa15.88■□□□□ 0.13
SPTLC1-204ENST00000469778 DALRD3Q5D0E6 543 aaKnown RBP15.88■□□□□ 0.13
SPTLC1-204ENST00000469778 DDX46Q7L014 1031 aaKnown RBP15.88■□□□□ 0.13
SPTLC1-204ENST00000469778 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
SPTLC1-204ENST00000469778 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 CSF1RP07333 972 aa15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 UBTFL1P0CB47 393 aaPredicted RBP15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 CC2D2BQ6DHV5 1058 aa15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 SYNE4Q8N205 404 aa15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 CCDC24Q8N4L8 307 aa15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 ZNF622Q969S3 477 aaKnown RBP eCLIP15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 CLUAP1Q96AJ1 413 aa15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 RTL9Q8NET4 1388 aa15.87■□□□□ 0.13
SPTLC1-204ENST00000469778 SRCAPQ6ZRS2 3230 aa15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 NBPF7P0C2Y1 421 aaPredicted RBP15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 CHRNA5P30532 468 aa15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 CTSWP56202 376 aa15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 TMEM57Q8N5G2 664 aa15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 NLGN2Q8NFZ4 835 aa15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 TTLL11Q8NHH1 800 aa15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 TMX4Q9H1E5 349 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms