RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 NUP98P52948 1817 aa9.32□□□□□ -0.92
SNRPD3-205ENST00000468770 SLX4Q8IY92 1834 aa9.32□□□□□ -0.92
SNRPD3-205ENST00000468770 COL11A2P13942 1736 aaPredicted RBP9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 ELL2O00472 640 aaPredicted RBP9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 HOXA10P31260 410 aaPredicted RBP9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 TCIRG1Q13488 830 aa9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 OLFM4Q6UX06 510 aa9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 MRS2Q9HD23 443 aa9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 HYPKQ9NX55 129 aa9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 ABCC12Q96J65 1359 aa9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 IBTKQ9P2D0 1353 aaPredicted RBP9.31□□□□□ -0.92
SNRPD3-205ENST00000468770 APLP1P51693 650 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 FKBP4Q02790 459 aaKnown RBP eCLIP9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 FSTL1Q12841 308 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 SLC10A5Q5PT55 438 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 CC2D2BQ6DHV5 1058 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 NLRP10Q86W26 655 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 SYNE4Q8N205 404 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 PLBD2Q8NHP8 589 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 CRAMP1Q96RY5 1269 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 CHMP4AQ9BY43 222 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 TMX4Q9H1E5 349 aaPredicted RBP9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 ZNF277Q9NRM2 450 aaPredicted RBP9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 TRMT112Q9UI30 125 aaKnown RBP9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 CCDC88AQ3V6T2 1871 aa9.3□□□□□ -0.92
SNRPD3-205ENST00000468770 TCERG1O14776 1098 aaKnown RBP9.29□□□□□ -0.92
SNRPD3-205ENST00000468770 GRIPAP1Q4V328 841 aa9.29□□□□□ -0.92
SNRPD3-205ENST00000468770 SMC1BQ8NDV3 1235 aa9.29□□□□□ -0.92
SNRPD3-205ENST00000468770 FER1L6Q2WGJ9 1857 aa9.29□□□□□ -0.92
SNRPD3-205ENST00000468770 RNF123Q5XPI4 1314 aa9.29□□□□□ -0.92
SNRPD3-205ENST00000468770 SH3TC1Q8TE82 1336 aa9.29□□□□□ -0.92
SNRPD3-205ENST00000468770 CACNA1SQ13698 1873 aa9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 PPEF1O14829 653 aaPredicted RBP9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 DDNO94850 711 aaPredicted RBP9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 HCLS1P14317 486 aaPredicted RBP9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 IARSP41252 1262 aaKnown RBP9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 CCDC27Q2M243 656 aa9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 C3orf67Q6ZVT6 689 aa9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 RIC3Q7Z5B4 369 aa9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 C8orf58Q8NAV2 365 aa9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 JDP2Q8WYK2 163 aa9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 PSMD1Q99460 953 aa9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 RIC1Q4ADV7 1423 aa9.28□□□□□ -0.92
SNRPD3-205ENST00000468770 POTECB2RU33 542 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 BBOX1O75936 387 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 GOLGA2Q08379 1002 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 CCDC30Q5VVM6 783 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 DDX46Q7L014 1031 aaKnown RBP9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 ZNF428Q96B54 188 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 ISCA1Q9BUE6 129 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 PHAXQ9H814 394 aaKnown RBP9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 ARFGEF2Q9Y6D5 1785 aa9.27□□□□□ -0.93
SNRPD3-205ENST00000468770 TNRC6CQ9HCJ0 1690 aaKnown RBP9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 IQCA1LA6NCM1 817 aa9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 TRIM28Q13263 835 aaKnown RBP9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 NCBP3Q53F19 620 aaKnown RBP9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 TSR2Q969E8 191 aaKnown RBP9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 FAM89AQ96GI7 184 aa9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 SALL2Q9Y467 1007 aaPredicted RBP9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 ATP6V0A2Q9Y487 856 aa9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 ABCC4O15439 1325 aa9.26□□□□□ -0.93
SNRPD3-205ENST00000468770 TIAM2Q8IVF5 1701 aa9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 DICER1Q9UPY3 1922 aaKnown RBP9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 FZD9O00144 591 aa9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 EIF6P56537 245 aaKnown RBP9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 RTL5Q5HYW3 569 aaPredicted RBP9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 SP8Q8IXZ3 490 aa9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 LARGE2Q8N3Y3 721 aa9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 TSPYL6Q8N831 410 aa9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 STK31Q9BXU1 1019 aa9.25□□□□□ -0.93
SNRPD3-205ENST00000468770 CEP350Q5VT06 3117 aa9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 HSP90B1P14625 803 aaKnown RBP9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 GRAPQ13588 217 aa9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 TWISTNBQ3B726 338 aaPredicted RBP9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 DPP8Q6V1X1 898 aaPredicted RBP9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 FAM9BQ8IZU0 186 aa9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 MPNDQ8N594 471 aa9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 SUPT20HQ8NEM7 779 aa9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 GRAPLQ8TC17 118 aaPredicted RBP9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 L3MBTL3Q96JM7 780 aaPredicted RBP9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 MYD88Q99836 296 aa9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 IL16Q14005 1332 aa9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 ZNF541Q9H0D2 1346 aa9.24□□□□□ -0.93
SNRPD3-205ENST00000468770 WDR90Q96KV7 1748 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 IRS4O14654 1257 aaPredicted RBP9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 PPIP5K2O43314 1243 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 HTRA3P83110 453 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 SF3B3Q15393 1217 aaKnown RBP9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 CHADLQ6NUI6 762 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 TMC4Q7Z404 712 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 WDR63Q8IWG1 891 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 NIM1KQ8IY84 436 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 GPC2Q8N158 579 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 DNAJC5GQ8N7S2 189 aa9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 ZBTB38Q8NAP3 1195 aaPredicted RBP9.23□□□□□ -0.93
SNRPD3-205ENST00000468770 CCDC191Q8NCU4 936 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms