RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 MYH14Q7Z406 1995 aaKnown RBP9.69□□□□□ -0.86
SND1-205ENST00000467238 PALLDQ8WX93 1383 aa9.69□□□□□ -0.86
SND1-205ENST00000467238 PANK3Q9H999 370 aa9.69□□□□□ -0.86
SND1-205ENST00000467238 PLEKHG2Q9H7P9 1386 aa9.68□□□□□ -0.86
SND1-205ENST00000467238 TNFRSF10AO00220 468 aa9.68□□□□□ -0.86
SND1-205ENST00000467238 EIF4A2Q14240 407 aaKnown RBP9.68□□□□□ -0.86
SND1-205ENST00000467238 SWT1Q5T5J6 900 aaKnown RBP9.68□□□□□ -0.86
SND1-205ENST00000467238 MPRIPQ6WCQ1 1025 aa9.68□□□□□ -0.86
SND1-205ENST00000467238 PPEF1O14829 653 aaPredicted RBP9.67□□□□□ -0.86
SND1-205ENST00000467238 POLD1P28340 1107 aa9.67□□□□□ -0.86
SND1-205ENST00000467238 TNNT2P45379 298 aaPredicted RBP9.67□□□□□ -0.86
SND1-205ENST00000467238 COL23A1Q86Y22 540 aaPredicted RBP9.67□□□□□ -0.86
SND1-205ENST00000467238 SPG7Q9UQ90 795 aa9.67□□□□□ -0.86
SND1-205ENST00000467238 SCN11AQ9UI33 1791 aa9.67□□□□□ -0.86
SND1-205ENST00000467238 COL5A3P25940 1745 aaPredicted RBP9.67□□□□□ -0.86
SND1-205ENST00000467238 IGSF1Q8N6C5 1336 aa9.66□□□□□ -0.86
SND1-205ENST00000467238 TLL1O43897 1013 aa9.66□□□□□ -0.86
SND1-205ENST00000467238 HMGB2P26583 209 aaKnown RBP9.66□□□□□ -0.86
SND1-205ENST00000467238 ZNF697Q5TEC3 545 aa9.66□□□□□ -0.86
SND1-205ENST00000467238 PIGBQ92521 554 aa9.66□□□□□ -0.86
SND1-205ENST00000467238 SMARCC1Q92922 1105 aaPredicted RBP9.66□□□□□ -0.86
SND1-205ENST00000467238 CDHR5Q9HBB8 845 aa9.66□□□□□ -0.86
SND1-205ENST00000467238 ZNF831Q5JPB2 1677 aa9.66□□□□□ -0.86
SND1-205ENST00000467238 PHKG2P15735 406 aa9.65□□□□□ -0.86
SND1-205ENST00000467238 IFNL2Q8IZJ0 200 aa9.65□□□□□ -0.86
SND1-205ENST00000467238 DACH1Q9UI36 760 aa9.65□□□□□ -0.86
SND1-205ENST00000467238 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
SND1-205ENST00000467238 BLOC1S3Q6QNY0 202 aa9.64□□□□□ -0.87
SND1-205ENST00000467238 ANKLE1Q8NAG6 615 aa9.64□□□□□ -0.87
SND1-205ENST00000467238 FLAD1Q8NFF5 587 aa9.64□□□□□ -0.87
SND1-205ENST00000467238 TMOD3Q9NYL9 352 aa9.64□□□□□ -0.87
SND1-205ENST00000467238 STK17AQ9UEE5 414 aa9.64□□□□□ -0.87
SND1-205ENST00000467238 LOC102724428A0A0B4J2F2 783 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 WFS1O76024 890 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 SIK1P57059 783 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 MSL1Q68DK7 614 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 MORC1Q86VD1 984 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 AMIGO3Q86WK7 504 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 NLGN2Q8NFZ4 835 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 KCNV2Q8TDN2 545 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 KNSTRNQ9Y448 316 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 KIF13BQ9NQT8 1826 aa9.63□□□□□ -0.87
SND1-205ENST00000467238 LOC100996750A0A140TA64 210 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 TTC13Q8NBP0 860 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 LINC00116Q8NCU8 138 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 AK7Q96M32 723 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 KRTAP4-6Q9BYQ5 205 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 ASAP1Q9ULH1 1129 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 KDM6AO15550 1401 aaPredicted RBP9.62□□□□□ -0.87
SND1-205ENST00000467238 C4AP0C0L4 1744 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 KDRP35968 1356 aa9.62□□□□□ -0.87
SND1-205ENST00000467238 KIF7Q2M1P5 1343 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 S1PR4O95977 384 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
SND1-205ENST00000467238 SSFA2P28290 1259 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 ITPK1Q13572 414 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 GPR162Q16538 588 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 PLEKHO1Q53GL0 409 aaPredicted RBP9.61□□□□□ -0.87
SND1-205ENST00000467238 AEBP1Q8IUX7 1158 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 ZNF784Q8NCA9 323 aaPredicted RBP9.61□□□□□ -0.87
SND1-205ENST00000467238 NECTIN2Q92692 538 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 ATG3Q9NT62 314 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 PCDHB3Q9Y5E6 796 aa9.61□□□□□ -0.87
SND1-205ENST00000467238 CICQ96RK0 1608 aaPredicted RBP9.6□□□□□ -0.87
SND1-205ENST00000467238 BRCA1P38398 1863 aaKnown RBP9.6□□□□□ -0.87
SND1-205ENST00000467238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.6□□□□□ -0.87
SND1-205ENST00000467238 ERVV-2B6SEH9 535 aa9.6□□□□□ -0.87
SND1-205ENST00000467238 OSBPP22059 807 aa9.6□□□□□ -0.87
SND1-205ENST00000467238 ATP6V1AP38606 617 aa9.6□□□□□ -0.87
SND1-205ENST00000467238 NFX1Q12986 1120 aaKnown RBP9.6□□□□□ -0.87
SND1-205ENST00000467238 AMOTQ4VCS5 1084 aa9.6□□□□□ -0.87
SND1-205ENST00000467238 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
SND1-205ENST00000467238 SMIM5Q71RC9 77 aa9.6□□□□□ -0.87
SND1-205ENST00000467238 DCAF5Q96JK2 942 aa9.6□□□□□ -0.87
SND1-205ENST00000467238 RBM27Q9P2N5 1060 aaKnown RBP9.6□□□□□ -0.87
SND1-205ENST00000467238 TJP1Q07157 1748 aa9.59□□□□□ -0.87
SND1-205ENST00000467238 WIPF1O43516 503 aa9.59□□□□□ -0.87
SND1-205ENST00000467238 IL13P35225 146 aa9.59□□□□□ -0.87
SND1-205ENST00000467238 PLA2G2CQ5R387 149 aa9.59□□□□□ -0.87
SND1-205ENST00000467238 ZNF530Q6P9A1 599 aaPredicted RBP9.59□□□□□ -0.87
SND1-205ENST00000467238 SLC4A9Q96Q91 983 aa9.59□□□□□ -0.87
SND1-205ENST00000467238 N4BP2Q86UW6 1770 aaPredicted RBP9.59□□□□□ -0.87
SND1-205ENST00000467238 KIAA1551Q9HCM1 1747 aa9.59□□□□□ -0.87
SND1-205ENST00000467238 GNPATO15228 680 aa9.58□□□□□ -0.88
SND1-205ENST00000467238 PER1O15534 1290 aaPredicted RBP9.58□□□□□ -0.88
SND1-205ENST00000467238 YBX3P16989 372 aaKnown RBP eCLIP9.58□□□□□ -0.884e-12■□□□□ 9.5
SND1-205ENST00000467238 SULT6B1Q6IMI4 303 aa9.58□□□□□ -0.88
SND1-205ENST00000467238 ARHGEF1Q92888 912 aaKnown RBP9.58□□□□□ -0.88
SND1-205ENST00000467238 CD2APQ9Y5K6 639 aa9.58□□□□□ -0.88
SND1-205ENST00000467238 ADAMTS7Q9UKP4 1686 aa9.58□□□□□ -0.88
SND1-205ENST00000467238 MTHFSP49914 203 aa9.57□□□□□ -0.88
SND1-205ENST00000467238 CABP4P57796 275 aa9.57□□□□□ -0.88
SND1-205ENST00000467238 C1orf141Q5JVX7 400 aa9.57□□□□□ -0.88
SND1-205ENST00000467238 PKD2L1Q9P0L9 805 aa9.57□□□□□ -0.88
SND1-205ENST00000467238 GMPR2Q9P2T1 348 aaKnown RBP9.57□□□□□ -0.88
SND1-205ENST00000467238 CNTNAP4Q9C0A0 1308 aa9.56□□□□□ -0.88
SND1-205ENST00000467238 UBR2Q8IWV8 1755 aa9.56□□□□□ -0.88
SND1-205ENST00000467238 MRC1P22897 1456 aa9.56□□□□□ -0.88
SND1-205ENST00000467238 GRXCR2A6NFK2 248 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms