RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 MBIPQ9NS73 344 aa32.6■■■□□ 2.81
SDF2L1-202ENST00000466935 HOXA10P31260 410 aaPredicted RBP32.58■■■□□ 2.81
SDF2L1-202ENST00000466935 CHPF2Q9P2E5 772 aa32.58■■■□□ 2.81
SDF2L1-202ENST00000466935 DBF4Q9UBU7 674 aaPredicted RBP32.58■■■□□ 2.81
SDF2L1-202ENST00000466935 DUSP27Q5VZP5 1158 aa32.57■■■□□ 2.8
SDF2L1-202ENST00000466935 RTKN2Q8IZC4 609 aa32.57■■■□□ 2.8
SDF2L1-202ENST00000466935 RRAGCQ9HB90 399 aa32.57■■■□□ 2.8
SDF2L1-202ENST00000466935 DPY19L2Q6NUT2 758 aa32.56■■■□□ 2.8
SDF2L1-202ENST00000466935 UTP14AQ9BVJ6 771 aaKnown RBP32.56■■■□□ 2.8
SDF2L1-202ENST00000466935 WDR90Q96KV7 1748 aa32.56■■■□□ 2.8
SDF2L1-202ENST00000466935 AIMP1Q12904 312 aaKnown RBP32.55■■■□□ 2.8
SDF2L1-202ENST00000466935 SLC10A5Q5PT55 438 aa32.55■■■□□ 2.8
SDF2L1-202ENST00000466935 RPGRQ92834 1020 aaKnown RBP32.55■■■□□ 2.8
SDF2L1-202ENST00000466935 FKBP4Q02790 459 aaKnown RBP eCLIP32.54■■■□□ 2.8
SDF2L1-202ENST00000466935 CCDC184Q52MB2 194 aa32.54■■■□□ 2.8
SDF2L1-202ENST00000466935 VEGFAP15692 232 aaPredicted RBP32.53■■■□□ 2.8
SDF2L1-202ENST00000466935 FSTL1Q12841 308 aa32.53■■■□□ 2.8
SDF2L1-202ENST00000466935 TCIRG1Q13488 830 aa32.53■■■□□ 2.8
SDF2L1-202ENST00000466935 CC2D2BQ6DHV5 1058 aa32.53■■■□□ 2.8
SDF2L1-202ENST00000466935 CRAMP1Q96RY5 1269 aa32.53■■■□□ 2.8
SDF2L1-202ENST00000466935 HYPKQ9NX55 129 aa32.53■■■□□ 2.8
SDF2L1-202ENST00000466935 ANP32CO43423 234 aa32.52■■■□□ 2.8
SDF2L1-202ENST00000466935 PLBD2Q8NHP8 589 aa32.52■■■□□ 2.8
SDF2L1-202ENST00000466935 CEP350Q5VT06 3117 aa32.52■■■□□ 2.8
SDF2L1-202ENST00000466935 SNED1Q8TER0 1413 aa32.51■■■□□ 2.8
SDF2L1-202ENST00000466935 CCDC27Q2M243 656 aa32.51■■■□□ 2.79
SDF2L1-202ENST00000466935 GRIPAP1Q4V328 841 aa32.51■■■□□ 2.79
SDF2L1-202ENST00000466935 NCBP3Q53F19 620 aaKnown RBP32.51■■■□□ 2.79
SDF2L1-202ENST00000466935 NLRP10Q86W26 655 aa32.51■■■□□ 2.79
SDF2L1-202ENST00000466935 RBM17Q96I25 401 aaKnown RBP32.51■■■□□ 2.79
SDF2L1-202ENST00000466935 NLRP3Q96P20 1036 aa32.51■■■□□ 2.79
SDF2L1-202ENST00000466935 CHMP4AQ9BY43 222 aa32.51■■■□□ 2.79
SDF2L1-202ENST00000466935 APLP1P51693 650 aa32.49■■■□□ 2.79
SDF2L1-202ENST00000466935 LAMB2P55268 1798 aa32.48■■■□□ 2.79
SDF2L1-202ENST00000466935 ANKRD13DQ6ZTN6 518 aa32.48■■■□□ 2.79
SDF2L1-202ENST00000466935 PSMD1Q99460 953 aa32.48■■■□□ 2.79
SDF2L1-202ENST00000466935 MRS2Q9HD23 443 aa32.46■■■□□ 2.79
SDF2L1-202ENST00000466935 OLFM4Q6UX06 510 aa32.45■■■□□ 2.79
SDF2L1-202ENST00000466935 SMC1BQ8NDV3 1235 aa32.45■■■□□ 2.79
SDF2L1-202ENST00000466935 SH3TC1Q8TE82 1336 aa32.45■■■□□ 2.78
SDF2L1-202ENST00000466935 C3orf67Q6ZVT6 689 aa32.44■■■□□ 2.78
SDF2L1-202ENST00000466935 TRMT112Q9UI30 125 aaKnown RBP32.44■■■□□ 2.78
SDF2L1-202ENST00000466935 ISCA1Q9BUE6 129 aa32.43■■■□□ 2.78
SDF2L1-202ENST00000466935 ZNF277Q9NRM2 450 aaPredicted RBP32.43■■■□□ 2.78
SDF2L1-202ENST00000466935 POTECB2RU33 542 aa32.42■■■□□ 2.78
SDF2L1-202ENST00000466935 IARSP41252 1262 aaKnown RBP32.42■■■□□ 2.78
SDF2L1-202ENST00000466935 SYNE4Q8N205 404 aa32.42■■■□□ 2.78
SDF2L1-202ENST00000466935 PPEF1O14829 653 aaPredicted RBP32.41■■■□□ 2.78
SDF2L1-202ENST00000466935 TRIM28Q13263 835 aaKnown RBP32.41■■■□□ 2.78
SDF2L1-202ENST00000466935 WWC1Q8IX03 1113 aa32.41■■■□□ 2.78
SDF2L1-202ENST00000466935 SCN4AP35499 1836 aa32.4■■■□□ 2.78
SDF2L1-202ENST00000466935 C8orf58Q8NAV2 365 aa32.4■■■□□ 2.78
SDF2L1-202ENST00000466935 IL16Q14005 1332 aa32.4■■■□□ 2.78
SDF2L1-202ENST00000466935 DDX60Q8IY21 1712 aaKnown RBP32.39■■■□□ 2.78
SDF2L1-202ENST00000466935 ELL2O00472 640 aaPredicted RBP32.38■■■□□ 2.77
SDF2L1-202ENST00000466935 GOLGA2Q08379 1002 aa32.38■■■□□ 2.77
SDF2L1-202ENST00000466935 CCDC30Q5VVM6 783 aa32.38■■■□□ 2.77
SDF2L1-202ENST00000466935 L3MBTL3Q96JM7 780 aaPredicted RBP32.38■■■□□ 2.77
SDF2L1-202ENST00000466935 DDNO94850 711 aaPredicted RBP32.37■■■□□ 2.77
SDF2L1-202ENST00000466935 HCLS1P14317 486 aaPredicted RBP32.37■■■□□ 2.77
SDF2L1-202ENST00000466935 TMX4Q9H1E5 349 aaPredicted RBP32.37■■■□□ 2.77
SDF2L1-202ENST00000466935 ATP6V0A2Q9Y487 856 aa32.37■■■□□ 2.77
SDF2L1-202ENST00000466935 ABCC4O15439 1325 aa32.36■■■□□ 2.77
SDF2L1-202ENST00000466935 BBOX1O75936 387 aa32.36■■■□□ 2.77
SDF2L1-202ENST00000466935 IQCA1LA6NCM1 817 aa32.35■■■□□ 2.77
SDF2L1-202ENST00000466935 FZD9O00144 591 aa32.35■■■□□ 2.77
SDF2L1-202ENST00000466935 DDX46Q7L014 1031 aaKnown RBP32.34■■■□□ 2.77
SDF2L1-202ENST00000466935 RIC3Q7Z5B4 369 aa32.34■■■□□ 2.77
SDF2L1-202ENST00000466935 JDP2Q8WYK2 163 aa32.34■■■□□ 2.77
SDF2L1-202ENST00000466935 VPS33BQ9H267 617 aa32.33■■■□□ 2.77
SDF2L1-202ENST00000466935 PHAXQ9H814 394 aaKnown RBP32.33■■■□□ 2.77
SDF2L1-202ENST00000466935 ATP5J2-PTCD1G3V325 749 aa32.32■■■□□ 2.76
SDF2L1-202ENST00000466935 TMC4Q7Z404 712 aa32.32■■■□□ 2.76
SDF2L1-202ENST00000466935 ZNF541Q9H0D2 1346 aa32.31■■■□□ 2.76
SDF2L1-202ENST00000466935 DDX58O95786 925 aaKnown RBP32.31■■■□□ 2.76
SDF2L1-202ENST00000466935 SP8Q8IXZ3 490 aa32.31■■■□□ 2.76
SDF2L1-202ENST00000466935 TSPYL6Q8N831 410 aa32.31■■■□□ 2.76
SDF2L1-202ENST00000466935 TSR2Q969E8 191 aaKnown RBP32.31■■■□□ 2.76
SDF2L1-202ENST00000466935 GRAPQ13588 217 aa32.3■■■□□ 2.76
SDF2L1-202ENST00000466935 GRAPLQ8TC17 118 aaPredicted RBP32.3■■■□□ 2.76
SDF2L1-202ENST00000466935 HSP90B1P14625 803 aaKnown RBP32.29■■■□□ 2.76
SDF2L1-202ENST00000466935 SF3B3Q15393 1217 aaKnown RBP32.29■■■□□ 2.76
SDF2L1-202ENST00000466935 DNAJC5GQ8N7S2 189 aa32.29■■■□□ 2.76
SDF2L1-202ENST00000466935 FAM89AQ96GI7 184 aa32.29■■■□□ 2.76
SDF2L1-202ENST00000466935 LRRC37AA6NMS7 1700 aa32.29■■■□□ 2.76
SDF2L1-202ENST00000466935 CACNA1FO60840 1977 aa32.28■■■□□ 2.76
SDF2L1-202ENST00000466935 COL4A5P29400 1685 aa32.28■■■□□ 2.76
SDF2L1-202ENST00000466935 WDR63Q8IWG1 891 aa32.28■■■□□ 2.76
SDF2L1-202ENST00000466935 GPC2Q8N158 579 aa32.28■■■□□ 2.76
SDF2L1-202ENST00000466935 SUPT20HQ8NEM7 779 aa32.28■■■□□ 2.76
SDF2L1-202ENST00000466935 RTFDC1Q9BY42 306 aaPredicted RBP32.28■■■□□ 2.76
SDF2L1-202ENST00000466935 TAF1P21675 1872 aa32.27■■■□□ 2.76
SDF2L1-202ENST00000466935 TCERG1O14776 1098 aaKnown RBP32.27■■■□□ 2.76
SDF2L1-202ENST00000466935 LARGE2Q8N3Y3 721 aa32.27■■■□□ 2.76
SDF2L1-202ENST00000466935 CCDC191Q8NCU4 936 aa32.27■■■□□ 2.76
SDF2L1-202ENST00000466935 STK31Q9BXU1 1019 aa32.27■■■□□ 2.76
SDF2L1-202ENST00000466935 TWISTNBQ3B726 338 aaPredicted RBP32.26■■■□□ 2.75
SDF2L1-202ENST00000466935 ZBTB38Q8NAP3 1195 aaPredicted RBP32.26■■■□□ 2.75
SDF2L1-202ENST00000466935 EIF6P56537 245 aaKnown RBP32.25■■■□□ 2.75
SDF2L1-202ENST00000466935 METTL22Q9BUU2 404 aaPredicted RBP32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms