RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 YBX3P16989 372 aaKnown RBP eCLIP29.79■■■□□ 2.36
SUMO3-205ENST00000466861 G2E3Q7L622 706 aa29.79■■■□□ 2.36
SUMO3-205ENST00000466861 PELP1Q8IZL8 1130 aaKnown RBP29.79■■■□□ 2.36
SUMO3-205ENST00000466861 PI4KAP1Q8N8J0 262 aa29.79■■■□□ 2.36
SUMO3-205ENST00000466861 CCDC191Q8NCU4 936 aa29.79■■■□□ 2.36
SUMO3-205ENST00000466861 ADCY9O60503 1353 aa29.78■■■□□ 2.36
SUMO3-205ENST00000466861 SRGNP10124 158 aa29.78■■■□□ 2.36
SUMO3-205ENST00000466861 ALDH1L2Q3SY69 923 aa29.78■■■□□ 2.36
SUMO3-205ENST00000466861 DALRD3Q5D0E6 543 aaKnown RBP29.78■■■□□ 2.36
SUMO3-205ENST00000466861 STYK1Q6J9G0 422 aa29.78■■■□□ 2.36
SUMO3-205ENST00000466861 MAP3K2Q9Y2U5 619 aa29.78■■■□□ 2.36
SUMO3-205ENST00000466861 NEXNQ0ZGT2 675 aa29.77■■■□□ 2.36
SUMO3-205ENST00000466861 ERFEQ4G0M1 354 aa29.77■■■□□ 2.36
SUMO3-205ENST00000466861 CCDC24Q8N4L8 307 aa29.77■■■□□ 2.36
SUMO3-205ENST00000466861 CHD4Q14839 1912 aa29.77■■■□□ 2.36
SUMO3-205ENST00000466861 COL11A2P13942 1736 aaPredicted RBP29.76■■■□□ 2.36
SUMO3-205ENST00000466861 SH3TC1Q8TE82 1336 aa29.76■■■□□ 2.36
SUMO3-205ENST00000466861 FKBP5Q13451 457 aaPredicted RBP29.76■■■□□ 2.35
SUMO3-205ENST00000466861 NUTM1Q86Y26 1132 aa29.76■■■□□ 2.35
SUMO3-205ENST00000466861 TTLL6Q8N841 843 aa29.76■■■□□ 2.35
SUMO3-205ENST00000466861 MASTLQ96GX5 879 aa29.76■■■□□ 2.35
SUMO3-205ENST00000466861 ABCC12Q96J65 1359 aa29.76■■■□□ 2.35
SUMO3-205ENST00000466861 CRY2Q49AN0 593 aa29.75■■■□□ 2.35
SUMO3-205ENST00000466861 CNKSR1Q969H4 720 aa29.75■■■□□ 2.35
SUMO3-205ENST00000466861 MYD88Q99836 296 aa29.75■■■□□ 2.35
SUMO3-205ENST00000466861 TRMT112Q9UI30 125 aaKnown RBP29.75■■■□□ 2.35
SUMO3-205ENST00000466861 BCS1LQ9Y276 419 aa29.75■■■□□ 2.35
SUMO3-205ENST00000466861 ATP5J2-PTCD1G3V325 749 aa29.74■■■□□ 2.35
SUMO3-205ENST00000466861 NPR1P16066 1061 aa29.74■■■□□ 2.35
SUMO3-205ENST00000466861 HSP90B1P14625 803 aaKnown RBP29.73■■■□□ 2.35
SUMO3-205ENST00000466861 DNAAF4Q8WXU2 420 aa29.73■■■□□ 2.35
SUMO3-205ENST00000466861 MRPL50Q8N5N7 158 aaKnown RBP29.72■■■□□ 2.35
SUMO3-205ENST00000466861 NLRP3Q96P20 1036 aa29.72■■■□□ 2.35
SUMO3-205ENST00000466861 CWC25Q9NXE8 425 aaPredicted RBP29.72■■■□□ 2.35
SUMO3-205ENST00000466861 BRPF1P55201 1214 aaPredicted RBP29.71■■■□□ 2.35
SUMO3-205ENST00000466861 ZBTB38Q8NAP3 1195 aaPredicted RBP29.71■■■□□ 2.35
SUMO3-205ENST00000466861 ZNF622Q969S3 477 aaKnown RBP eCLIP29.71■■■□□ 2.35
SUMO3-205ENST00000466861 TNRC6CQ9HCJ0 1690 aaKnown RBP29.71■■■□□ 2.35
SUMO3-205ENST00000466861 SSH1Q8WYL5 1049 aa29.7■■■□□ 2.35
SUMO3-205ENST00000466861 PTPRCP08575 1304 aa29.7■■■□□ 2.34
SUMO3-205ENST00000466861 ALDH1B1P30837 517 aa29.69■■■□□ 2.34
SUMO3-205ENST00000466861 HOXA10P31260 410 aaPredicted RBP29.69■■■□□ 2.34
SUMO3-205ENST00000466861 PCCAP05165 728 aaPredicted RBP29.68■■■□□ 2.34
SUMO3-205ENST00000466861 IGKV5-2P06315 115 aa29.68■■■□□ 2.34
SUMO3-205ENST00000466861 LINS1Q8NG48 757 aa29.68■■■□□ 2.34
SUMO3-205ENST00000466861 LAMB2P55268 1798 aa29.67■■■□□ 2.34
SUMO3-205ENST00000466861 WWC3Q9ULE0 1092 aa29.67■■■□□ 2.34
SUMO3-205ENST00000466861 NEURL1BA8MQ27 555 aa29.66■■■□□ 2.34
SUMO3-205ENST00000466861 FAM89AQ96GI7 184 aa29.66■■■□□ 2.34
SUMO3-205ENST00000466861 DDX60Q8IY21 1712 aaKnown RBP29.65■■■□□ 2.34
SUMO3-205ENST00000466861 SOGA3Q5TF21 947 aa29.65■■■□□ 2.34
SUMO3-205ENST00000466861 RPGRQ92834 1020 aaKnown RBP29.65■■■□□ 2.34
SUMO3-205ENST00000466861 CRAMP1Q96RY5 1269 aa29.65■■■□□ 2.34
SUMO3-205ENST00000466861 SMC4Q9NTJ3 1288 aa29.65■■■□□ 2.34
SUMO3-205ENST00000466861 SLX4Q8IY92 1834 aa29.64■■■□□ 2.34
SUMO3-205ENST00000466861 CDHR2Q9BYE9 1310 aa29.64■■■□□ 2.34
SUMO3-205ENST00000466861 PRPF40BQ6NWY9 871 aaKnown RBP29.63■■■□□ 2.33
SUMO3-205ENST00000466861 RBM17Q96I25 401 aaKnown RBP29.63■■■□□ 2.33
SUMO3-205ENST00000466861 CACNA1SQ13698 1873 aa29.62■■■□□ 2.33
SUMO3-205ENST00000466861 IRS4O14654 1257 aaPredicted RBP29.62■■■□□ 2.33
SUMO3-205ENST00000466861 HCLS1P14317 486 aaPredicted RBP29.62■■■□□ 2.33
SUMO3-205ENST00000466861 RARSP54136 660 aaKnown RBP29.62■■■□□ 2.33
SUMO3-205ENST00000466861 SF3B3Q15393 1217 aaKnown RBP29.62■■■□□ 2.33
SUMO3-205ENST00000466861 SYNE4Q8N205 404 aa29.62■■■□□ 2.33
SUMO3-205ENST00000466861 GCKRQ14397 625 aa29.61■■■□□ 2.33
SUMO3-205ENST00000466861 BEND3Q5T5X7 828 aa29.61■■■□□ 2.33
SUMO3-205ENST00000466861 F6X3S4 739 aa29.6■■■□□ 2.33
SUMO3-205ENST00000466861 CWF19L2Q2TBE0 894 aaKnown RBP29.6■■■□□ 2.33
SUMO3-205ENST00000466861 ARHGAP27Q6ZUM4 889 aa29.6■■■□□ 2.33
SUMO3-205ENST00000466861 GOLGB1Q14789 3259 aaKnown RBP29.59■■■□□ 2.33
SUMO3-205ENST00000466861 H7C1W4 665 aa29.59■■■□□ 2.33
SUMO3-205ENST00000466861 ALDH1L1O75891 902 aa29.59■■■□□ 2.33
SUMO3-205ENST00000466861 C3orf67Q6ZVT6 689 aa29.59■■■□□ 2.33
SUMO3-205ENST00000466861 C7orf43Q8WVR3 580 aa29.59■■■□□ 2.33
SUMO3-205ENST00000466861 PDE8AO60658 829 aa29.58■■■□□ 2.33
SUMO3-205ENST00000466861 CC2D2BQ6DHV5 1058 aa29.58■■■□□ 2.33
SUMO3-205ENST00000466861 KIF16BQ96L93 1317 aa29.58■■■□□ 2.33
SUMO3-205ENST00000466861 BCL2L13Q9BXK5 485 aa29.58■■■□□ 2.33
SUMO3-205ENST00000466861 GRIPAP1Q4V328 841 aa29.57■■■□□ 2.32
SUMO3-205ENST00000466861 FER1L6Q2WGJ9 1857 aa29.57■■■□□ 2.32
SUMO3-205ENST00000466861 MYH3P11055 1940 aa29.56■■■□□ 2.32
SUMO3-205ENST00000466861 DDX46Q7L014 1031 aaKnown RBP29.56■■■□□ 2.32
SUMO3-205ENST00000466861 ARHGAP45Q92619 1136 aa29.56■■■□□ 2.32
SUMO3-205ENST00000466861 SRCIN1Q9C0H9 1055 aa29.56■■■□□ 2.32
SUMO3-205ENST00000466861 C21orf2O43822 256 aa29.55■■■□□ 2.32
SUMO3-205ENST00000466861 RTL5Q5HYW3 569 aaPredicted RBP29.55■■■□□ 2.32
SUMO3-205ENST00000466861 PLA2G12BQ9BX93 195 aa29.55■■■□□ 2.32
SUMO3-205ENST00000466861 LTBP3Q9NS15 1303 aa29.54■■■□□ 2.32
SUMO3-205ENST00000466861 BBOX1O75936 387 aa29.54■■■□□ 2.32
SUMO3-205ENST00000466861 TMC4Q7Z404 712 aa29.54■■■□□ 2.32
SUMO3-205ENST00000466861 API5Q9BZZ5 524 aaKnown RBP29.54■■■□□ 2.32
SUMO3-205ENST00000466861 SBF1O95248 1867 aa29.53■■■□□ 2.32
SUMO3-205ENST00000466861 CCDC93Q567U6 631 aa29.53■■■□□ 2.32
SUMO3-205ENST00000466861 UTRNP46939 3433 aa29.52■■■□□ 2.32
SUMO3-205ENST00000466861 ABCC4O15439 1325 aa29.52■■■□□ 2.32
SUMO3-205ENST00000466861 YY1P25490 414 aa29.52■■■□□ 2.32
SUMO3-205ENST00000466861 CASP7P55210 303 aa29.52■■■□□ 2.32
SUMO3-205ENST00000466861 GRAPQ13588 217 aa29.52■■■□□ 2.32
SUMO3-205ENST00000466861 CCDC152Q4G0S7 254 aa29.52■■■□□ 2.32
SUMO3-205ENST00000466861 SLC4A10Q6U841 1118 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms