RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 LRRC69Q6ZNQ3 347 aa7.29□□□□□ -1.24
CDC42BPA-211ENST00000466538 DNMT3LQ9UJW3 386 aa7.29□□□□□ -1.24
CDC42BPA-211ENST00000466538 EFHC2Q5JST6 749 aa7.28□□□□□ -1.24
CDC42BPA-211ENST00000466538 MRRFQ96E11 262 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-211ENST00000466538 HSH2DQ96JZ2 352 aa7.28□□□□□ -1.24
CDC42BPA-211ENST00000466538 NIF3L1Q9GZT8 377 aa7.28□□□□□ -1.24
CDC42BPA-211ENST00000466538 SENP2Q9HC62 589 aa7.28□□□□□ -1.24
CDC42BPA-211ENST00000466538 GPR182O15218 404 aa7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 P4HBP07237 508 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 C8orf34Q49A92 452 aa7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 FIGNL1Q6PIW4 674 aa7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 KIFC2Q96AC6 838 aa7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 CEP63Q96MT8 703 aa7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 DNAJC25Q9H1X3 360 aa7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 GGNBP2Q9H3C7 697 aa7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 RTCBQ9Y3I0 505 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-211ENST00000466538 H7C1W4 665 aa7.26□□□□□ -1.25
CDC42BPA-211ENST00000466538 PRPF40AO75400 957 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-211ENST00000466538 ATP2B2Q01814 1243 aa7.26□□□□□ -1.25
CDC42BPA-211ENST00000466538 ALG1LQ6GMV1 187 aa7.26□□□□□ -1.25
CDC42BPA-211ENST00000466538 PDE12Q6L8Q7 609 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-211ENST00000466538 KLRG1Q96E93 195 aa7.26□□□□□ -1.25
CDC42BPA-211ENST00000466538 GMCL1Q96IK5 515 aa7.26□□□□□ -1.25
CDC42BPA-211ENST00000466538 GAS2L1Q99501 681 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-211ENST00000466538 SENP3-EIF4A1A0A087X0R7 540 aa7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 EGFRP00533 1210 aa7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 LDHBP07195 334 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 MAPK8P45983 427 aa7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 KCNQ4P56696 695 aa7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 TYRO3Q06418 890 aa7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 ENOX2Q16206 610 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 CMTR1Q8N1G2 835 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 RUBCNLQ9H714 662 aa7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 GPAMQ9HCL2 828 aa7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 KIAA1522Q9P206 1035 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-211ENST00000466538 SLC35F4A4IF30 521 aa7.24□□□□□ -1.25
CDC42BPA-211ENST00000466538 TAGLNQ01995 201 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-211ENST00000466538 FBF1Q8TES7 1133 aa7.24□□□□□ -1.25
CDC42BPA-211ENST00000466538 FRMD6Q96NE9 622 aa7.24□□□□□ -1.25
CDC42BPA-211ENST00000466538 CSRNP1Q96S65 589 aa7.24□□□□□ -1.25
CDC42BPA-211ENST00000466538 ZCCHC2Q9C0B9 1178 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-211ENST00000466538 KCNMB2Q9Y691 235 aa7.24□□□□□ -1.25
CDC42BPA-211ENST00000466538 UBAP1LF5GYI3 381 aa7.23□□□□□ -1.25
CDC42BPA-211ENST00000466538 ST8SIA5O15466 376 aa7.23□□□□□ -1.25
CDC42BPA-211ENST00000466538 XPCQ01831 940 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-211ENST00000466538 PTSQ03393 145 aa7.23□□□□□ -1.25
CDC42BPA-211ENST00000466538 LAMC2Q13753 1193 aa7.23□□□□□ -1.25
CDC42BPA-211ENST00000466538 BRD7Q9NPI1 651 aa7.23□□□□□ -1.25
CDC42BPA-211ENST00000466538 PCDHGC4Q9Y5F7 938 aa7.23□□□□□ -1.25
CDC42BPA-211ENST00000466538 EIF1AYO14602 144 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 CPNE3O75131 537 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 FAM157BP0CG42 384 aa7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 ZNF438Q7Z4V0 828 aa7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 PMEPA1Q969W9 287 aa7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 IRX2Q9BZI1 471 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 EFCC1Q9HA90 598 aa7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 DACH1Q9UI36 760 aa7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 KCNH4Q9UQ05 1017 aa7.22□□□□□ -1.25
CDC42BPA-211ENST00000466538 PNMA6FA0A0J9YX94 578 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 ATXN7O15265 892 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 XYLBO75191 536 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 TNFRSF21O75509 655 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 RIPOR1Q6ZS17 1223 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 TMC4Q7Z404 712 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 TRIM22Q8IYM9 498 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 SNX29Q8TEQ0 813 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 TRIM47Q96LD4 638 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 NUCKS1Q9H1E3 243 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 ELP3Q9H9T3 547 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 IGSF5Q9NSI5 407 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 PARP2Q9UGN5 583 aa7.21□□□□□ -1.26
CDC42BPA-211ENST00000466538 EFSO43281 561 aa7.2□□□□□ -1.26
CDC42BPA-211ENST00000466538 GRNP28799 593 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-211ENST00000466538 DAB2P98082 770 aa7.2□□□□□ -1.26
CDC42BPA-211ENST00000466538 NLRP13Q86W25 1043 aa7.2□□□□□ -1.26
CDC42BPA-211ENST00000466538 DUSP9Q99956 384 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-211ENST00000466538 ZFYVE28Q9HCC9 887 aa7.2□□□□□ -1.26
CDC42BPA-211ENST00000466538 USP20Q9Y2K6 914 aa7.2□□□□□ -1.26
CDC42BPA-211ENST00000466538 A6NHS1 94 aa7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 GIPC1O14908 333 aa7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 TNP2Q05952 138 aa7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 ORC1Q13415 861 aa7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 UBAP2LQ14157 1087 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 MRPL58Q14197 206 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 TRIP4Q15650 581 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 DBN1Q16643 649 aa7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 CCDC155Q8N6L0 562 aa7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 WWC3Q9ULE0 1092 aa7.19□□□□□ -1.26
CDC42BPA-211ENST00000466538 SOBPA7XYQ1 873 aa7.18□□□□□ -1.26
CDC42BPA-211ENST00000466538 SORBS3O60504 671 aa7.18□□□□□ -1.26
CDC42BPA-211ENST00000466538 GNA15P30679 374 aa7.18□□□□□ -1.26
CDC42BPA-211ENST00000466538 CCINQ13939 588 aa7.18□□□□□ -1.26
CDC42BPA-211ENST00000466538 TTC39BQ5VTQ0 682 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-211ENST00000466538 MRS2Q9HD23 443 aa7.18□□□□□ -1.26
CDC42BPA-211ENST00000466538 ABI2Q9NYB9 513 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-211ENST00000466538 KHNYNO15037 678 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-211ENST00000466538 PHACTR2O75167 634 aa7.17□□□□□ -1.26
CDC42BPA-211ENST00000466538 THBS1P07996 1170 aa7.17□□□□□ -1.26
CDC42BPA-211ENST00000466538 MAPTP10636 758 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-211ENST00000466538 SFSWAPQ12872 951 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms