RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 HOXA10P31260 410 aaPredicted RBP24.86■■□□□ 1.57
SRSF4-202ENST00000466448 RPGRQ92834 1020 aaKnown RBP24.86■■□□□ 1.57
SRSF4-202ENST00000466448 ZNF34Q8IZ26 560 aa24.85■■□□□ 1.57
SRSF4-202ENST00000466448 GPC2Q8N158 579 aa24.85■■□□□ 1.57
SRSF4-202ENST00000466448 JDP2Q8WYK2 163 aa24.85■■□□□ 1.57
SRSF4-202ENST00000466448 CC2D2BQ6DHV5 1058 aa24.84■■□□□ 1.57
SRSF4-202ENST00000466448 SLC51AQ86UW1 340 aa24.84■■□□□ 1.57
SRSF4-202ENST00000466448 PNNQ9H307 717 aaKnown RBP24.84■■□□□ 1.57
SRSF4-202ENST00000466448 CLEC11AQ9Y240 323 aa24.84■■□□□ 1.57
SRSF4-202ENST00000466448 ADAMTSL1Q8N6G6 1762 aa24.84■■□□□ 1.57
SRSF4-202ENST00000466448 COL4A5P29400 1685 aa24.84■■□□□ 1.57
SRSF4-202ENST00000466448 ERBB4Q15303 1308 aa24.84■■□□□ 1.57
SRSF4-202ENST00000466448 TMEM88BA6NKF7 163 aa24.83■■□□□ 1.57
SRSF4-202ENST00000466448 NTSR2O95665 410 aa24.83■■□□□ 1.57
SRSF4-202ENST00000466448 GIGYF2Q6Y7W6 1299 aaKnown RBP24.83■■□□□ 1.57
SRSF4-202ENST00000466448 PNMA8AQ86V59 439 aaPredicted RBP24.83■■□□□ 1.57
SRSF4-202ENST00000466448 C3orf67Q6ZVT6 689 aa24.82■■□□□ 1.56
SRSF4-202ENST00000466448 TSPYL4Q9UJ04 414 aa24.82■■□□□ 1.56
SRSF4-202ENST00000466448 NUP98P52948 1817 aa24.82■■□□□ 1.56
SRSF4-202ENST00000466448 LRP10Q7Z4F1 713 aa24.81■■□□□ 1.56
SRSF4-202ENST00000466448 RBM17Q96I25 401 aaKnown RBP24.81■■□□□ 1.56
SRSF4-202ENST00000466448 CRAMP1Q96RY5 1269 aa24.81■■□□□ 1.56
SRSF4-202ENST00000466448 PPEF1O14829 653 aaPredicted RBP24.8■■□□□ 1.56
SRSF4-202ENST00000466448 PDIA6Q15084 440 aa24.8■■□□□ 1.56
SRSF4-202ENST00000466448 MAP1SQ66K74 1059 aaPredicted RBP24.8■■□□□ 1.56
SRSF4-202ENST00000466448 VEGFBP49765 207 aa24.79■■□□□ 1.56
SRSF4-202ENST00000466448 EIF6P56537 245 aaKnown RBP24.79■■□□□ 1.56
SRSF4-202ENST00000466448 GRIPAP1Q4V328 841 aa24.79■■□□□ 1.56
SRSF4-202ENST00000466448 CNTROBQ8N137 903 aa24.79■■□□□ 1.56
SRSF4-202ENST00000466448 GJA3Q9Y6H8 435 aa24.79■■□□□ 1.56
SRSF4-202ENST00000466448 TCERG1O14776 1098 aaKnown RBP24.78■■□□□ 1.56
SRSF4-202ENST00000466448 PARP10Q53GL7 1025 aa24.78■■□□□ 1.56
SRSF4-202ENST00000466448 PPP1R42Q7Z4L9 355 aa24.78■■□□□ 1.56
SRSF4-202ENST00000466448 FOXN1O15353 648 aa24.77■■□□□ 1.56
SRSF4-202ENST00000466448 EIF2S2P20042 333 aaKnown RBP24.77■■□□□ 1.56
SRSF4-202ENST00000466448 RIPK4P57078 832 aa24.77■■□□□ 1.56
SRSF4-202ENST00000466448 PROSER3Q2NL68 480 aa24.77■■□□□ 1.56
SRSF4-202ENST00000466448 LARGE2Q8N3Y3 721 aa24.77■■□□□ 1.56
SRSF4-202ENST00000466448 ANXA1P04083 346 aa24.76■■□□□ 1.55
SRSF4-202ENST00000466448 SCNN1DP51172 638 aa24.75■■□□□ 1.55
SRSF4-202ENST00000466448 NLRP3Q96P20 1036 aa24.75■■□□□ 1.55
SRSF4-202ENST00000466448 LTBP1Q14766 1721 aa24.75■■□□□ 1.55
SRSF4-202ENST00000466448 LMOD1P29536 600 aaPredicted RBP24.74■■□□□ 1.55
SRSF4-202ENST00000466448 SLC10A5Q5PT55 438 aa24.74■■□□□ 1.55
SRSF4-202ENST00000466448 UTP14AQ9BVJ6 771 aaKnown RBP24.74■■□□□ 1.55
SRSF4-202ENST00000466448 RASSF10A6NK89 507 aa24.73■■□□□ 1.55
SRSF4-202ENST00000466448 EPS15P42566 896 aa24.73■■□□□ 1.55
SRSF4-202ENST00000466448 BABAM1Q9NWV8 329 aa24.73■■□□□ 1.55
SRSF4-202ENST00000466448 ATP6V0A2Q9Y487 856 aa24.73■■□□□ 1.55
SRSF4-202ENST00000466448 NIM1KQ8IY84 436 aa24.72■■□□□ 1.55
SRSF4-202ENST00000466448 ABCC4O15439 1325 aa24.71■■□□□ 1.55
SRSF4-202ENST00000466448 PPIP5K2O43314 1243 aa24.71■■□□□ 1.55
SRSF4-202ENST00000466448 TMPOP42166 694 aaKnown RBP24.71■■□□□ 1.55
SRSF4-202ENST00000466448 AOC3Q16853 763 aa24.71■■□□□ 1.55
SRSF4-202ENST00000466448 AIDAQ96BJ3 306 aa24.71■■□□□ 1.55
SRSF4-202ENST00000466448 LMOD3Q0VAK6 560 aa24.7■■□□□ 1.54
SRSF4-202ENST00000466448 RALBP1Q15311 655 aa24.7■■□□□ 1.54
SRSF4-202ENST00000466448 DEFB115Q30KQ5 88 aa24.7■■□□□ 1.54
SRSF4-202ENST00000466448 COPS6Q7L5N1 327 aa24.7■■□□□ 1.54
SRSF4-202ENST00000466448 NECTIN2Q92692 538 aa24.7■■□□□ 1.54
SRSF4-202ENST00000466448 TMX4Q9H1E5 349 aaPredicted RBP24.7■■□□□ 1.54
SRSF4-202ENST00000466448 DDX21Q9NR30 783 aaKnown RBP eCLIP24.7■■□□□ 1.54
SRSF4-202ENST00000466448 CTCFP49711 727 aaPredicted RBP24.69■■□□□ 1.54
SRSF4-202ENST00000466448 NLRP10Q86W26 655 aa24.69■■□□□ 1.54
SRSF4-202ENST00000466448 XAGE3Q8WTP9 111 aa24.69■■□□□ 1.54
SRSF4-202ENST00000466448 PRDM10Q9NQV6 1147 aa24.69■■□□□ 1.54
SRSF4-202ENST00000466448 WBP1LQ9NX94 342 aa24.69■■□□□ 1.54
SRSF4-202ENST00000466448 ABT1Q9ULW3 272 aaKnown RBP24.69■■□□□ 1.54
SRSF4-202ENST00000466448 FMR1Q06787 632 aaKnown RBP eCLIP24.68■■□□□ 1.549e-8■□□□□ 10.8
SRSF4-202ENST00000466448 AIMP1Q12904 312 aaKnown RBP24.68■■□□□ 1.54
SRSF4-202ENST00000466448 USP50Q70EL3 339 aaPredicted RBP24.68■■□□□ 1.54
SRSF4-202ENST00000466448 VPS33BQ9H267 617 aa24.68■■□□□ 1.54
SRSF4-202ENST00000466448 HCLS1P14317 486 aaPredicted RBP24.67■■□□□ 1.54
SRSF4-202ENST00000466448 HSP90AB3PQ58FF7 597 aa24.67■■□□□ 1.54
SRSF4-202ENST00000466448 RTFDC1Q9BY42 306 aaPredicted RBP24.67■■□□□ 1.54
SRSF4-202ENST00000466448 WDR33Q9C0J8 1336 aaKnown RBP24.66■■□□□ 1.54
SRSF4-202ENST00000466448 KRT24Q2M2I5 525 aa24.66■■□□□ 1.54
SRSF4-202ENST00000466448 BBOX1O75936 387 aa24.65■■□□□ 1.54
SRSF4-202ENST00000466448 NEUROD2Q15784 382 aa24.65■■□□□ 1.54
SRSF4-202ENST00000466448 DPP8Q6V1X1 898 aaPredicted RBP24.65■■□□□ 1.54
SRSF4-202ENST00000466448 CCDC146Q8IYE0 955 aa24.65■■□□□ 1.54
SRSF4-202ENST00000466448 SUPT20HQ8NEM7 779 aa24.65■■□□□ 1.54
SRSF4-202ENST00000466448 GPRC5DQ9NZD1 345 aa24.65■■□□□ 1.54
SRSF4-202ENST00000466448 TRMT112Q9UI30 125 aaKnown RBP24.65■■□□□ 1.54
SRSF4-202ENST00000466448 ZNRF3Q9ULT6 936 aa24.65■■□□□ 1.54
SRSF4-202ENST00000466448 CHL1O00533 1208 aa24.64■■□□□ 1.54
SRSF4-202ENST00000466448 CXCL9Q07325 125 aa24.64■■□□□ 1.54
SRSF4-202ENST00000466448 TCIRG1Q13488 830 aa24.64■■□□□ 1.54
SRSF4-202ENST00000466448 SP8Q8IXZ3 490 aa24.64■■□□□ 1.54
SRSF4-202ENST00000466448 TRAF5O00463 557 aa24.63■■□□□ 1.53
SRSF4-202ENST00000466448 LBX1P52954 281 aa24.63■■□□□ 1.53
SRSF4-202ENST00000466448 SH3TC1Q8TE82 1336 aa24.62■■□□□ 1.53
SRSF4-202ENST00000466448 CST9Q5W186 159 aa24.62■■□□□ 1.53
SRSF4-202ENST00000466448 DDX46Q7L014 1031 aaKnown RBP24.62■■□□□ 1.53
SRSF4-202ENST00000466448 MPNDQ8N594 471 aa24.62■■□□□ 1.53
SRSF4-202ENST00000466448 ADARB2Q9NS39 739 aaKnown RBP24.62■■□□□ 1.53
SRSF4-202ENST00000466448 CHPF2Q9P2E5 772 aa24.62■■□□□ 1.53
SRSF4-202ENST00000466448 ANKRD36CQ5JPF3 1778 aa24.62■■□□□ 1.53
SRSF4-202ENST00000466448 GMPSP49915 693 aaPredicted RBP24.61■■□□□ 1.53
SRSF4-202ENST00000466448 MAP2K1Q02750 393 aaPredicted RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms