RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 TRIM35Q9UPQ4 493 aa20.16■□□□□ 0.82
HOXB3-204ENST00000465120 NTSR2O95665 410 aa20.15■□□□□ 0.82
HOXB3-204ENST00000465120 KRT24Q2M2I5 525 aa20.15■□□□□ 0.82
HOXB3-204ENST00000465120 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
HOXB3-204ENST00000465120 KLRG1Q96E93 195 aa20.15■□□□□ 0.82
HOXB3-204ENST00000465120 NLRP3Q96P20 1036 aa20.15■□□□□ 0.82
HOXB3-204ENST00000465120 UTP14AQ9BVJ6 771 aaKnown RBP20.15■□□□□ 0.82
HOXB3-204ENST00000465120 IBTKQ9P2D0 1353 aaPredicted RBP20.15■□□□□ 0.82
HOXB3-204ENST00000465120 IARSP41252 1262 aaKnown RBP20.14■□□□□ 0.81
HOXB3-204ENST00000465120 HSP90AB3PQ58FF7 597 aa20.14■□□□□ 0.81
HOXB3-204ENST00000465120 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.81
HOXB3-204ENST00000465120 TMX4Q9H1E5 349 aaPredicted RBP20.14■□□□□ 0.81
HOXB3-204ENST00000465120 IQCA1LA6NCM1 817 aa20.13■□□□□ 0.81
HOXB3-204ENST00000465120 HOXA10P31260 410 aaPredicted RBP20.13■□□□□ 0.81
HOXB3-204ENST00000465120 CC2D2BQ6DHV5 1058 aa20.13■□□□□ 0.81
HOXB3-204ENST00000465120 JDP2Q8WYK2 163 aa20.13■□□□□ 0.81
HOXB3-204ENST00000465120 DDX21Q9NR30 783 aaKnown RBP eCLIP20.13■□□□□ 0.81
HOXB3-204ENST00000465120 PPEF1O14829 653 aaPredicted RBP20.12■□□□□ 0.81
HOXB3-204ENST00000465120 HDGFL1Q5TGJ6 251 aa20.12■□□□□ 0.81
HOXB3-204ENST00000465120 CHADLQ6NUI6 762 aa20.12■□□□□ 0.81
HOXB3-204ENST00000465120 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
HOXB3-204ENST00000465120 ZNF541Q9H0D2 1346 aa20.11■□□□□ 0.81
HOXB3-204ENST00000465120 C3orf67Q6ZVT6 689 aa20.11■□□□□ 0.81
HOXB3-204ENST00000465120 PSMD1Q99460 953 aa20.11■□□□□ 0.81
HOXB3-204ENST00000465120 CHPF2Q9P2E5 772 aa20.11■□□□□ 0.81
HOXB3-204ENST00000465120 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
HOXB3-204ENST00000465120 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
HOXB3-204ENST00000465120 POTEJP0CG39 1038 aa20.1■□□□□ 0.81
HOXB3-204ENST00000465120 EAPPQ56P03 285 aaPredicted RBP20.1■□□□□ 0.81
HOXB3-204ENST00000465120 TRMT112Q9UI30 125 aaKnown RBP20.1■□□□□ 0.81
HOXB3-204ENST00000465120 EIF6P56537 245 aaKnown RBP20.09■□□□□ 0.81
HOXB3-204ENST00000465120 TCIRG1Q13488 830 aa20.09■□□□□ 0.81
HOXB3-204ENST00000465120 GRIPAP1Q4V328 841 aa20.09■□□□□ 0.81
HOXB3-204ENST00000465120 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
HOXB3-204ENST00000465120 ZNF428Q96B54 188 aa20.09■□□□□ 0.81
HOXB3-204ENST00000465120 CFAP44Q96MT7 982 aa20.09■□□□□ 0.81
HOXB3-204ENST00000465120 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
HOXB3-204ENST00000465120 APAF1O14727 1248 aa20.08■□□□□ 0.81
HOXB3-204ENST00000465120 HCLS1P14317 486 aaPredicted RBP20.08■□□□□ 0.81
HOXB3-204ENST00000465120 SLC10A5Q5PT55 438 aa20.08■□□□□ 0.81
HOXB3-204ENST00000465120 IFFO2Q5TF58 517 aa20.08■□□□□ 0.81
HOXB3-204ENST00000465120 LARGE2Q8N3Y3 721 aa20.08■□□□□ 0.81
HOXB3-204ENST00000465120 L3MBTL3Q96JM7 780 aaPredicted RBP20.08■□□□□ 0.81
HOXB3-204ENST00000465120 TAF1DQ9H5J8 278 aaPredicted RBP20.08■□□□□ 0.81
HOXB3-204ENST00000465120 DBF4Q9UBU7 674 aaPredicted RBP20.08■□□□□ 0.81
HOXB3-204ENST00000465120 HACL1Q9UJ83 578 aa20.08■□□□□ 0.81
HOXB3-204ENST00000465120 GJA3Q9Y6H8 435 aa20.08■□□□□ 0.81
HOXB3-204ENST00000465120 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
HOXB3-204ENST00000465120 FZD9O00144 591 aa20.07■□□□□ 0.8
HOXB3-204ENST00000465120 HOXB7P09629 217 aa20.07■□□□□ 0.8
HOXB3-204ENST00000465120 DUSP27Q5VZP5 1158 aa20.07■□□□□ 0.8
HOXB3-204ENST00000465120 CALD1Q05682 793 aaKnown RBP20.06■□□□□ 0.8
HOXB3-204ENST00000465120 ANKRD13DQ6ZTN6 518 aa20.06■□□□□ 0.8
HOXB3-204ENST00000465120 LDHDQ86WU2 507 aa20.06■□□□□ 0.8
HOXB3-204ENST00000465120 MBIPQ9NS73 344 aa20.06■□□□□ 0.8
HOXB3-204ENST00000465120 SH3TC1Q8TE82 1336 aa20.05■□□□□ 0.8
HOXB3-204ENST00000465120 SCN4AP35499 1836 aa20.05■□□□□ 0.8
HOXB3-204ENST00000465120 EPHX2P34913 555 aa20.05■□□□□ 0.8
HOXB3-204ENST00000465120 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
HOXB3-204ENST00000465120 SLC51AQ86UW1 340 aa20.05■□□□□ 0.8
HOXB3-204ENST00000465120 GPC2Q8N158 579 aa20.05■□□□□ 0.8
HOXB3-204ENST00000465120 JMYQ8N9B5 988 aa20.05■□□□□ 0.8
HOXB3-204ENST00000465120 PLBD2Q8NHP8 589 aa20.05■□□□□ 0.8
HOXB3-204ENST00000465120 HYPKQ9NX55 129 aa20.05■□□□□ 0.8
HOXB3-204ENST00000465120 ABCC4O15439 1325 aa20.04■□□□□ 0.8
HOXB3-204ENST00000465120 ANKRD36CQ5JPF3 1778 aa20.04■□□□□ 0.8
HOXB3-204ENST00000465120 ELL2O00472 640 aaPredicted RBP20.04■□□□□ 0.8
HOXB3-204ENST00000465120 GNAI1P63096 354 aa20.04■□□□□ 0.8
HOXB3-204ENST00000465120 NIM1KQ8IY84 436 aa20.04■□□□□ 0.8
HOXB3-204ENST00000465120 ATP6V0A2Q9Y487 856 aa20.04■□□□□ 0.8
HOXB3-204ENST00000465120 ATP5J2-PTCD1G3V325 749 aa20.03■□□□□ 0.8
HOXB3-204ENST00000465120 PPIP5K2O43314 1243 aa20.03■□□□□ 0.8
HOXB3-204ENST00000465120 BBOX1O75936 387 aa20.03■□□□□ 0.8
HOXB3-204ENST00000465120 IFT57Q9NWB7 429 aa20.03■□□□□ 0.8
HOXB3-204ENST00000465120 SNED1Q8TER0 1413 aa20.02■□□□□ 0.8
HOXB3-204ENST00000465120 LMOD1P29536 600 aaPredicted RBP20.02■□□□□ 0.8
HOXB3-204ENST00000465120 PNMA8AQ86V59 439 aaPredicted RBP20.02■□□□□ 0.8
HOXB3-204ENST00000465120 AOC3Q16853 763 aa20.01■□□□□ 0.79
HOXB3-204ENST00000465120 RTL5Q5HYW3 569 aaPredicted RBP20.01■□□□□ 0.79
HOXB3-204ENST00000465120 DPP8Q6V1X1 898 aaPredicted RBP20.01■□□□□ 0.79
HOXB3-204ENST00000465120 RIC3Q7Z5B4 369 aa20.01■□□□□ 0.79
HOXB3-204ENST00000465120 MPNDQ8N594 471 aa20.01■□□□□ 0.79
HOXB3-204ENST00000465120 SUPT20HQ8NEM7 779 aa20.01■□□□□ 0.79
HOXB3-204ENST00000465120 FAM89AQ96GI7 184 aa20.01■□□□□ 0.79
HOXB3-204ENST00000465120 CREBZFQ9NS37 354 aa20.01■□□□□ 0.79
HOXB3-204ENST00000465120 ZNF853P0CG23 659 aa20■□□□□ 0.79
HOXB3-204ENST00000465120 GOLGA2Q08379 1002 aa20■□□□□ 0.79
HOXB3-204ENST00000465120 SP8Q8IXZ3 490 aa20■□□□□ 0.79
HOXB3-204ENST00000465120 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
HOXB3-204ENST00000465120 GRAPQ13588 217 aa19.99■□□□□ 0.79
HOXB3-204ENST00000465120 GRAPLQ8TC17 118 aaPredicted RBP19.99■□□□□ 0.79
HOXB3-204ENST00000465120 ISCA1Q9BUE6 129 aa19.99■□□□□ 0.79
HOXB3-204ENST00000465120 MAP1SQ66K74 1059 aaPredicted RBP19.98■□□□□ 0.79
HOXB3-204ENST00000465120 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
HOXB3-204ENST00000465120 LAMB2P55268 1798 aa19.98■□□□□ 0.79
HOXB3-204ENST00000465120 COL4A5P29400 1685 aa19.97■□□□□ 0.79
HOXB3-204ENST00000465120 CNTROBQ8N137 903 aa19.97■□□□□ 0.79
HOXB3-204ENST00000465120 PHAXQ9H814 394 aaKnown RBP19.97■□□□□ 0.79
HOXB3-204ENST00000465120 ITGBL1O95965 494 aaPredicted RBP19.96■□□□□ 0.79
HOXB3-204ENST00000465120 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms