RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 COL6A3P12111 3177 aa21.2■□□□□ 0.98
SNX12-203ENST00000465030 CENPFP49454 3210 aa21.2■□□□□ 0.98
SNX12-203ENST00000465030 RNMTO43148 476 aaKnown RBP21.2■□□□□ 0.98
SNX12-203ENST00000465030 CC2D2BQ6DHV5 1058 aa21.19■□□□□ 0.98
SNX12-203ENST00000465030 NIM1KQ8IY84 436 aa21.19■□□□□ 0.98
SNX12-203ENST00000465030 CSRNP1Q96S65 589 aa21.19■□□□□ 0.98
SNX12-203ENST00000465030 TRIOBPQ9H2D6 2365 aa21.18■□□□□ 0.98
SNX12-203ENST00000465030 ZNF157P51786 506 aaPredicted RBP21.18■□□□□ 0.98
SNX12-203ENST00000465030 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
SNX12-203ENST00000465030 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
SNX12-203ENST00000465030 HDAC9Q9UKV0 1011 aa21.18■□□□□ 0.98
SNX12-203ENST00000465030 AKAP11Q9UKA4 1901 aa21.17■□□□□ 0.98
SNX12-203ENST00000465030 RANBP2P49792 3224 aaKnown RBP21.17■□□□□ 0.98
SNX12-203ENST00000465030 HIRAP54198 1017 aaPredicted RBP21.17■□□□□ 0.98
SNX12-203ENST00000465030 SLC17A8Q8NDX2 589 aa21.17■□□□□ 0.98
SNX12-203ENST00000465030 NPC1L1Q9UHC9 1359 aa21.16■□□□□ 0.98
SNX12-203ENST00000465030 GMPSP49915 693 aaPredicted RBP21.16■□□□□ 0.98
SNX12-203ENST00000465030 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
SNX12-203ENST00000465030 USP48Q86UV5 1035 aa21.16■□□□□ 0.98
SNX12-203ENST00000465030 DZIP3Q86Y13 1208 aaKnown RBP21.16■□□□□ 0.98
SNX12-203ENST00000465030 TTC5Q8N0Z6 440 aa21.16■□□□□ 0.98
SNX12-203ENST00000465030 CDHR2Q9BYE9 1310 aa21.15■□□□□ 0.98
SNX12-203ENST00000465030 SLC10A3P09131 477 aa21.15■□□□□ 0.98
SNX12-203ENST00000465030 FBXO46Q6PJ61 603 aaPredicted RBP21.15■□□□□ 0.98
SNX12-203ENST00000465030 TPTE2Q6XPS3 522 aa21.15■□□□□ 0.98
SNX12-203ENST00000465030 TRPM4Q8TD43 1214 aa21.15■□□□□ 0.98
SNX12-203ENST00000465030 TEX13AQ9BXU3 409 aaPredicted RBP21.15■□□□□ 0.98
SNX12-203ENST00000465030 GBA2Q9HCG7 927 aaPredicted RBP21.15■□□□□ 0.98
SNX12-203ENST00000465030 GRIPAP1Q4V328 841 aa21.14■□□□□ 0.97
SNX12-203ENST00000465030 CLEC4GQ6UXB4 293 aa21.14■□□□□ 0.97
SNX12-203ENST00000465030 DLK2Q6UY11 383 aa21.14■□□□□ 0.97
SNX12-203ENST00000465030 ZNF296Q8WUU4 475 aaPredicted RBP21.14■□□□□ 0.97
SNX12-203ENST00000465030 COLQQ9Y215 455 aaPredicted RBP21.14■□□□□ 0.97
SNX12-203ENST00000465030 HEG1Q9ULI3 1381 aa21.13■□□□□ 0.97
SNX12-203ENST00000465030 A1BGP04217 495 aa21.13■□□□□ 0.97
SNX12-203ENST00000465030 CXCL9Q07325 125 aa21.13■□□□□ 0.97
SNX12-203ENST00000465030 C2orf69Q8N8R5 385 aa21.13■□□□□ 0.97
SNX12-203ENST00000465030 ZNF496Q96IT1 587 aaPredicted RBP21.13■□□□□ 0.97
SNX12-203ENST00000465030 PPIP5K2O43314 1243 aa21.12■□□□□ 0.97
SNX12-203ENST00000465030 REM2Q8IYK8 340 aaPredicted RBP21.12■□□□□ 0.97
SNX12-203ENST00000465030 CEP290O15078 2479 aa21.12■□□□□ 0.97
SNX12-203ENST00000465030 CRY2Q49AN0 593 aa21.11■□□□□ 0.97
SNX12-203ENST00000465030 ZNF652Q9Y2D9 606 aa21.11■□□□□ 0.97
SNX12-203ENST00000465030 AOC3Q16853 763 aa21.1■□□□□ 0.97
SNX12-203ENST00000465030 SLC51AQ86UW1 340 aa21.09■□□□□ 0.97
SNX12-203ENST00000465030 ZNRF3Q9ULT6 936 aa21.09■□□□□ 0.97
SNX12-203ENST00000465030 NIP7Q9Y221 180 aaKnown RBP eCLIP21.09■□□□□ 0.97
SNX12-203ENST00000465030 POTEFA5A3E0 1075 aa21.08■□□□□ 0.97
SNX12-203ENST00000465030 FAM177BA6PVY3 158 aa21.08■□□□□ 0.97
SNX12-203ENST00000465030 BCL2L13Q9BXK5 485 aa21.08■□□□□ 0.97
SNX12-203ENST00000465030 KRT26Q7Z3Y9 468 aa21.07■□□□□ 0.96
SNX12-203ENST00000465030 ZNF790Q6PG37 636 aa21.06■□□□□ 0.96
SNX12-203ENST00000465030 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
SNX12-203ENST00000465030 SHTN1A0MZ66 631 aa21.05■□□□□ 0.96
SNX12-203ENST00000465030 TBC1D8O95759 1140 aa21.05■□□□□ 0.96
SNX12-203ENST00000465030 CNOT7Q9UIV1 285 aaKnown RBP21.05■□□□□ 0.96
SNX12-203ENST00000465030 GTF2E1P29083 439 aaPredicted RBP21.04■□□□□ 0.96
SNX12-203ENST00000465030 RASAL3Q86YV0 1011 aa21.04■□□□□ 0.96
SNX12-203ENST00000465030 ABCC12Q96J65 1359 aa21.04■□□□□ 0.96
SNX12-203ENST00000465030 ADM5C9JUS6 153 aa21.03■□□□□ 0.96
SNX12-203ENST00000465030 H7C1D1 291 aa21.03■□□□□ 0.96
SNX12-203ENST00000465030 PPEF1O14829 653 aaPredicted RBP21.03■□□□□ 0.96
SNX12-203ENST00000465030 HOXA10P31260 410 aaPredicted RBP21.03■□□□□ 0.96
SNX12-203ENST00000465030 NOM1Q5C9Z4 860 aaKnown RBP21.03■□□□□ 0.96
SNX12-203ENST00000465030 RPGRQ92834 1020 aaKnown RBP21.03■□□□□ 0.96
SNX12-203ENST00000465030 KIF7Q2M1P5 1343 aa21.03■□□□□ 0.96
SNX12-203ENST00000465030 KIAA0100Q14667 2235 aaKnown RBP21.02■□□□□ 0.96
SNX12-203ENST00000465030 GPR25O00155 361 aa21.02■□□□□ 0.96
SNX12-203ENST00000465030 RGL2O15211 777 aa21.02■□□□□ 0.96
SNX12-203ENST00000465030 IL13P35225 146 aa21.02■□□□□ 0.96
SNX12-203ENST00000465030 PIP4K2AP48426 406 aaPredicted RBP21.02■□□□□ 0.96
SNX12-203ENST00000465030 TNIP1Q15025 636 aa21.02■□□□□ 0.96
SNX12-203ENST00000465030 INTS3Q68E01 1043 aaKnown RBP21.02■□□□□ 0.96
SNX12-203ENST00000465030 RIC1Q4ADV7 1423 aa21.02■□□□□ 0.96
SNX12-203ENST00000465030 TCERG1O14776 1098 aaKnown RBP21.01■□□□□ 0.95
SNX12-203ENST00000465030 RAD17O75943 681 aa21.01■□□□□ 0.95
SNX12-203ENST00000465030 MICALL2Q8IY33 904 aa21.01■□□□□ 0.95
SNX12-203ENST00000465030 FMNL2Q96PY5 1086 aa21.01■□□□□ 0.95
SNX12-203ENST00000465030 MTHFSDQ2M296 383 aaKnown RBP21■□□□□ 0.95
SNX12-203ENST00000465030 SAMD7Q7Z3H4 446 aa20.98■□□□□ 0.95
SNX12-203ENST00000465030 NUTM1Q86Y26 1132 aa20.98■□□□□ 0.95
SNX12-203ENST00000465030 SUPT20HQ8NEM7 779 aa20.98■□□□□ 0.95
SNX12-203ENST00000465030 DCPSQ96C86 337 aaKnown RBP20.98■□□□□ 0.95
SNX12-203ENST00000465030 CRAMP1Q96RY5 1269 aa20.98■□□□□ 0.95
SNX12-203ENST00000465030 LAMA3Q16787 3333 aa20.98■□□□□ 0.95
SNX12-203ENST00000465030 OTUD5Q96G74 571 aa20.97■□□□□ 0.95
SNX12-203ENST00000465030 RBM17Q96I25 401 aaKnown RBP20.97■□□□□ 0.95
SNX12-203ENST00000465030 RTFDC1Q9BY42 306 aaPredicted RBP20.97■□□□□ 0.95
SNX12-203ENST00000465030 RBBP6Q7Z6E9 1792 aaKnown RBP20.96■□□□□ 0.95
SNX12-203ENST00000465030 FKTNO75072 461 aa20.96■□□□□ 0.95
SNX12-203ENST00000465030 TEFQ10587 303 aa20.96■□□□□ 0.95
SNX12-203ENST00000465030 TBC1D10BQ4KMP7 808 aaPredicted RBP20.96■□□□□ 0.95
SNX12-203ENST00000465030 NYXQ9GZU5 481 aa20.96■□□□□ 0.95
SNX12-203ENST00000465030 PAPPA2Q9BXP8 1791 aa20.95■□□□□ 0.94
SNX12-203ENST00000465030 UNC80Q8N2C7 3258 aa20.95■□□□□ 0.94
SNX12-203ENST00000465030 EGFRP00533 1210 aa20.95■□□□□ 0.94
SNX12-203ENST00000465030 EN2P19622 333 aaPredicted RBP20.95■□□□□ 0.94
SNX12-203ENST00000465030 MNX1P50219 401 aaPredicted RBP20.95■□□□□ 0.94
SNX12-203ENST00000465030 KIAA2012Q0VF49 1180 aa20.95■□□□□ 0.94
SNX12-203ENST00000465030 TMX4Q9H1E5 349 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms