RNA–Protein interactions for RNA: ENST00000463194.1

RFC2-203, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-203ENST00000463194 ISCA1Q9BUE6 129 aa25.02■■□□□ 1.6
RFC2-203ENST00000463194 TRIM28Q13263 835 aaKnown RBP25.01■■□□□ 1.59
RFC2-203ENST00000463194 STK31Q9BXU1 1019 aa25.01■■□□□ 1.59
RFC2-203ENST00000463194 VAMP4O75379 141 aa25■■□□□ 1.59
RFC2-203ENST00000463194 PRPF40BQ6NWY9 871 aaKnown RBP25■■□□□ 1.59
RFC2-203ENST00000463194 ALDH1B1P30837 517 aa24.99■■□□□ 1.59
RFC2-203ENST00000463194 EXOSC9Q06265 439 aaKnown RBP24.99■■□□□ 1.59
RFC2-203ENST00000463194 RIC3Q7Z5B4 369 aa24.99■■□□□ 1.59
RFC2-203ENST00000463194 ANKRD36CQ5JPF3 1778 aa24.98■■□□□ 1.59
RFC2-203ENST00000463194 DDX58O95786 925 aaKnown RBP24.98■■□□□ 1.59
RFC2-203ENST00000463194 HOXA10P31260 410 aaPredicted RBP24.98■■□□□ 1.59
RFC2-203ENST00000463194 C7orf43Q8WVR3 580 aa24.98■■□□□ 1.59
RFC2-203ENST00000463194 C21orf2O43822 256 aa24.97■■□□□ 1.59
RFC2-203ENST00000463194 SOGA3Q5TF21 947 aa24.97■■□□□ 1.59
RFC2-203ENST00000463194 NLRP3Q96P20 1036 aa24.97■■□□□ 1.59
RFC2-203ENST00000463194 TRMT112Q9UI30 125 aaKnown RBP24.97■■□□□ 1.59
RFC2-203ENST00000463194 SH3TC1Q8TE82 1336 aa24.96■■□□□ 1.59
RFC2-203ENST00000463194 C9orf131Q5VYM1 1079 aa24.96■■□□□ 1.59
RFC2-203ENST00000463194 SLC4A2P04920 1241 aa24.95■■□□□ 1.58
RFC2-203ENST00000463194 SLX4Q8IY92 1834 aa24.95■■□□□ 1.58
RFC2-203ENST00000463194 TNRC6CQ9HCJ0 1690 aaKnown RBP24.94■■□□□ 1.58
RFC2-203ENST00000463194 ATP5J2-PTCD1G3V325 749 aa24.94■■□□□ 1.58
RFC2-203ENST00000463194 NFKBIEO00221 500 aa24.94■■□□□ 1.58
RFC2-203ENST00000463194 KSR2Q6VAB6 950 aa24.94■■□□□ 1.58
RFC2-203ENST00000463194 CRAMP1Q96RY5 1269 aa24.94■■□□□ 1.58
RFC2-203ENST00000463194 METTL22Q9BUU2 404 aaPredicted RBP24.94■■□□□ 1.58
RFC2-203ENST00000463194 ARFGEF2Q9Y6D5 1785 aa24.93■■□□□ 1.58
RFC2-203ENST00000463194 LTBP3Q9NS15 1303 aa24.93■■□□□ 1.58
RFC2-203ENST00000463194 TCERG1O14776 1098 aaKnown RBP24.93■■□□□ 1.58
RFC2-203ENST00000463194 LMNB1P20700 586 aa24.93■■□□□ 1.58
RFC2-203ENST00000463194 MIER1Q8N108 512 aa24.93■■□□□ 1.58
RFC2-203ENST00000463194 RPGRQ92834 1020 aaKnown RBP24.93■■□□□ 1.58
RFC2-203ENST00000463194 ZNF219Q9P2Y4 722 aaPredicted RBP24.93■■□□□ 1.58
RFC2-203ENST00000463194 E9PSI1 815 aa24.92■■□□□ 1.58
RFC2-203ENST00000463194 RASSF7Q02833 373 aa24.92■■□□□ 1.58
RFC2-203ENST00000463194 C3orf67Q6ZVT6 689 aa24.92■■□□□ 1.58
RFC2-203ENST00000463194 SYNE4Q8N205 404 aa24.92■■□□□ 1.58
RFC2-203ENST00000463194 RBM17Q96I25 401 aaKnown RBP24.92■■□□□ 1.58
RFC2-203ENST00000463194 RNF181Q9P0P0 153 aa24.92■■□□□ 1.58
RFC2-203ENST00000463194 PI4KAP2A4QPH2 592 aa24.91■■□□□ 1.58
RFC2-203ENST00000463194 G2E3Q7L622 706 aa24.91■■□□□ 1.58
RFC2-203ENST00000463194 PI4KAP1Q8N8J0 262 aa24.91■■□□□ 1.58
RFC2-203ENST00000463194 CCDC191Q8NCU4 936 aa24.91■■□□□ 1.58
RFC2-203ENST00000463194 SBF1O95248 1867 aa24.9■■□□□ 1.58
RFC2-203ENST00000463194 HCLS1P14317 486 aaPredicted RBP24.9■■□□□ 1.58
RFC2-203ENST00000463194 PRELPP51888 382 aa24.9■■□□□ 1.58
RFC2-203ENST00000463194 CCDC93Q567U6 631 aa24.9■■□□□ 1.58
RFC2-203ENST00000463194 MYD88Q99836 296 aa24.9■■□□□ 1.58
RFC2-203ENST00000463194 MAP3K2Q9Y2U5 619 aa24.9■■□□□ 1.58
RFC2-203ENST00000463194 ZC3H4Q9UPT8 1303 aaKnown RBP24.89■■□□□ 1.58
RFC2-203ENST00000463194 SLFN5Q08AF3 891 aa24.89■■□□□ 1.58
RFC2-203ENST00000463194 FLIIQ13045 1269 aa24.89■■□□□ 1.58
RFC2-203ENST00000463194 FAM89AQ96GI7 184 aa24.89■■□□□ 1.58
RFC2-203ENST00000463194 FER1L6Q2WGJ9 1857 aa24.88■■□□□ 1.57
RFC2-203ENST00000463194 CACNA1FO60840 1977 aa24.88■■□□□ 1.57
RFC2-203ENST00000463194 CC2D2BQ6DHV5 1058 aa24.88■■□□□ 1.57
RFC2-203ENST00000463194 ZBTB38Q8NAP3 1195 aaPredicted RBP24.88■■□□□ 1.57
RFC2-203ENST00000463194 TAOK3Q9H2K8 898 aa24.88■■□□□ 1.57
RFC2-203ENST00000463194 GPBP1L1Q9HC44 474 aaPredicted RBP24.88■■□□□ 1.57
RFC2-203ENST00000463194 RTKN2Q8IZC4 609 aa24.87■■□□□ 1.57
RFC2-203ENST00000463194 CWC25Q9NXE8 425 aaPredicted RBP24.87■■□□□ 1.57
RFC2-203ENST00000463194 GRIPAP1Q4V328 841 aa24.86■■□□□ 1.57
RFC2-203ENST00000463194 PCCAP05165 728 aaPredicted RBP24.85■■□□□ 1.57
RFC2-203ENST00000463194 HSP90B1P14625 803 aaKnown RBP24.85■■□□□ 1.57
RFC2-203ENST00000463194 NEXNQ0ZGT2 675 aa24.85■■□□□ 1.57
RFC2-203ENST00000463194 SF3B3Q15393 1217 aaKnown RBP24.85■■□□□ 1.57
RFC2-203ENST00000463194 CACNA1SQ13698 1873 aa24.85■■□□□ 1.57
RFC2-203ENST00000463194 IRS4O14654 1257 aaPredicted RBP24.84■■□□□ 1.57
RFC2-203ENST00000463194 BBOX1O75936 387 aa24.84■■□□□ 1.57
RFC2-203ENST00000463194 IGKV5-2P06315 115 aa24.84■■□□□ 1.57
RFC2-203ENST00000463194 TRMT2AQ8IZ69 625 aaKnown RBP24.84■■□□□ 1.57
RFC2-203ENST00000463194 ZNF428Q96B54 188 aa24.84■■□□□ 1.57
RFC2-203ENST00000463194 FKBP4Q02790 459 aaKnown RBP eCLIP24.83■■□□□ 1.57
RFC2-203ENST00000463194 FKBP5Q13451 457 aaPredicted RBP24.83■■□□□ 1.57
RFC2-203ENST00000463194 OLFM4Q6UX06 510 aa24.83■■□□□ 1.57
RFC2-203ENST00000463194 DDX46Q7L014 1031 aaKnown RBP24.83■■□□□ 1.57
RFC2-203ENST00000463194 ABCC4O15439 1325 aa24.83■■□□□ 1.56
RFC2-203ENST00000463194 PPEF1O14829 653 aaPredicted RBP24.82■■□□□ 1.56
RFC2-203ENST00000463194 SNED1Q8TER0 1413 aa24.82■■□□□ 1.56
RFC2-203ENST00000463194 ZNF526Q8TF50 670 aaPredicted RBP24.82■■□□□ 1.56
RFC2-203ENST00000463194 RTL5Q5HYW3 569 aaPredicted RBP24.81■■□□□ 1.56
RFC2-203ENST00000463194 DNAAF4Q8WXU2 420 aa24.81■■□□□ 1.56
RFC2-203ENST00000463194 CDCA7LQ96GN5 454 aa24.81■■□□□ 1.56
RFC2-203ENST00000463194 PSMD1Q99460 953 aa24.81■■□□□ 1.56
RFC2-203ENST00000463194 ATP6V0A2Q9Y487 856 aa24.81■■□□□ 1.56
RFC2-203ENST00000463194 NEURL1BA8MQ27 555 aa24.8■■□□□ 1.56
RFC2-203ENST00000463194 GRAPQ13588 217 aa24.8■■□□□ 1.56
RFC2-203ENST00000463194 GRAPLQ8TC17 118 aaPredicted RBP24.8■■□□□ 1.56
RFC2-203ENST00000463194 LAMB2P55268 1798 aa24.8■■□□□ 1.56
RFC2-203ENST00000463194 DDX60Q8IY21 1712 aaKnown RBP24.79■■□□□ 1.56
RFC2-203ENST00000463194 TMC4Q7Z404 712 aa24.79■■□□□ 1.56
RFC2-203ENST00000463194 SP8Q8IXZ3 490 aa24.79■■□□□ 1.56
RFC2-203ENST00000463194 KDM2BQ8NHM5 1336 aa24.79■■□□□ 1.56
RFC2-203ENST00000463194 CDHR2Q9BYE9 1310 aa24.79■■□□□ 1.56
RFC2-203ENST00000463194 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
RFC2-203ENST00000463194 CWF19L2Q2TBE0 894 aaKnown RBP24.78■■□□□ 1.56
RFC2-203ENST00000463194 LINS1Q8NG48 757 aa24.78■■□□□ 1.56
RFC2-203ENST00000463194 TMX4Q9H1E5 349 aaPredicted RBP24.78■■□□□ 1.56
RFC2-203ENST00000463194 GLTPD2A6NH11 291 aa24.77■■□□□ 1.56
RFC2-203ENST00000463194 PDE8AO60658 829 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms