RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 MAP3K15Q6ZN16 1313 aa20.89■□□□□ 0.93
SND1-203ENST00000463020 HTATSF1O43719 755 aaKnown RBP20.89■□□□□ 0.93
SND1-203ENST00000463020 ALDH1B1P30837 517 aa20.89■□□□□ 0.93
SND1-203ENST00000463020 EPS15P42566 896 aa20.89■□□□□ 0.93
SND1-203ENST00000463020 CTCFP49711 727 aaPredicted RBP20.89■□□□□ 0.93
SND1-203ENST00000463020 SCNN1DP51172 638 aa20.89■□□□□ 0.93
SND1-203ENST00000463020 SUSD4Q5VX71 490 aa20.89■□□□□ 0.93
SND1-203ENST00000463020 ZBTB3Q9H5J0 574 aa20.89■□□□□ 0.93
SND1-203ENST00000463020 GJA3Q9Y6H8 435 aa20.89■□□□□ 0.93
SND1-203ENST00000463020 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
SND1-203ENST00000463020 HSPA8P11142 646 aaKnown RBP20.88■□□□□ 0.93
SND1-203ENST00000463020 MYL6BP14649 208 aa20.88■□□□□ 0.93
SND1-203ENST00000463020 GTF2E1P29083 439 aaPredicted RBP20.88■□□□□ 0.93
SND1-203ENST00000463020 RRP7AQ9Y3A4 280 aaKnown RBP20.88■□□□□ 0.93
SND1-203ENST00000463020 RIC1Q4ADV7 1423 aa20.87■□□□□ 0.93
SND1-203ENST00000463020 EIF4A1P60842 406 aaKnown RBP20.87■□□□□ 0.93
SND1-203ENST00000463020 PNMA8AQ86V59 439 aaPredicted RBP20.87■□□□□ 0.93
SND1-203ENST00000463020 WDR33Q9C0J8 1336 aaKnown RBP20.86■□□□□ 0.93
SND1-203ENST00000463020 ERVV-1B6SEH8 477 aa20.86■□□□□ 0.93
SND1-203ENST00000463020 TRAF5O00463 557 aa20.86■□□□□ 0.93
SND1-203ENST00000463020 HOXA10P31260 410 aaPredicted RBP20.86■□□□□ 0.93
SND1-203ENST00000463020 DEFB115Q30KQ5 88 aa20.86■□□□□ 0.93
SND1-203ENST00000463020 AIDAQ96BJ3 306 aa20.86■□□□□ 0.93
SND1-203ENST00000463020 DDX21Q9NR30 783 aaKnown RBP eCLIP20.86■□□□□ 0.93
SND1-203ENST00000463020 NTSR2O95665 410 aa20.85■□□□□ 0.93
SND1-203ENST00000463020 PLEKHF1Q96S99 279 aa20.85■□□□□ 0.93
SND1-203ENST00000463020 THSD7BQ9C0I4 1608 aa20.85■□□□□ 0.93
SND1-203ENST00000463020 LRP10Q7Z4F1 713 aa20.84■□□□□ 0.93
SND1-203ENST00000463020 ZNF34Q8IZ26 560 aa20.84■□□□□ 0.93
SND1-203ENST00000463020 JDP2Q8WYK2 163 aa20.84■□□□□ 0.93
SND1-203ENST00000463020 NYXQ9GZU5 481 aa20.84■□□□□ 0.93
SND1-203ENST00000463020 ABT1Q9ULW3 272 aaKnown RBP20.84■□□□□ 0.93
SND1-203ENST00000463020 PPEF1O14829 653 aaPredicted RBP20.83■□□□□ 0.93
SND1-203ENST00000463020 CST9Q5W186 159 aa20.83■□□□□ 0.93
SND1-203ENST00000463020 RPGRQ92834 1020 aaKnown RBP20.83■□□□□ 0.93
SND1-203ENST00000463020 IBTKQ9P2D0 1353 aaPredicted RBP20.83■□□□□ 0.92
SND1-203ENST00000463020 LARGE2Q8N3Y3 721 aa20.82■□□□□ 0.92
SND1-203ENST00000463020 EIF6P56537 245 aaKnown RBP20.81■□□□□ 0.92
SND1-203ENST00000463020 AOC3Q16853 763 aa20.81■□□□□ 0.92
SND1-203ENST00000463020 PROSER3Q2NL68 480 aa20.81■□□□□ 0.92
SND1-203ENST00000463020 CYP4F22Q6NT55 531 aa20.81■□□□□ 0.92
SND1-203ENST00000463020 KIF6Q6ZMV9 814 aa20.81■□□□□ 0.92
SND1-203ENST00000463020 ANXA1P04083 346 aa20.8■□□□□ 0.92
SND1-203ENST00000463020 PDIA6Q15084 440 aa20.8■□□□□ 0.92
SND1-203ENST00000463020 CRAMP1Q96RY5 1269 aa20.8■□□□□ 0.92
SND1-203ENST00000463020 GRM1Q13255 1194 aa20.79■□□□□ 0.92
SND1-203ENST00000463020 NFE2L2Q16236 605 aa20.79■□□□□ 0.92
SND1-203ENST00000463020 CC2D2BQ6DHV5 1058 aa20.79■□□□□ 0.92
SND1-203ENST00000463020 GIGYF2Q6Y7W6 1299 aaKnown RBP20.79■□□□□ 0.92
SND1-203ENST00000463020 ABHD8Q96I13 439 aa20.79■□□□□ 0.92
SND1-203ENST00000463020 CAPNS2Q96L46 248 aa20.79■□□□□ 0.92
SND1-203ENST00000463020 LMOD1P29536 600 aaPredicted RBP20.78■□□□□ 0.92
SND1-203ENST00000463020 RBM17Q96I25 401 aaKnown RBP20.78■□□□□ 0.92
SND1-203ENST00000463020 TSKSQ9UJT2 592 aa20.78■□□□□ 0.92
SND1-203ENST00000463020 ABCC4O15439 1325 aa20.78■□□□□ 0.92
SND1-203ENST00000463020 PPIP5K2O43314 1243 aa20.77■□□□□ 0.92
SND1-203ENST00000463020 AOC2O75106 756 aa20.77■□□□□ 0.92
SND1-203ENST00000463020 PNISRQ8TF01 805 aaKnown RBP20.77■□□□□ 0.92
SND1-203ENST00000463020 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
SND1-203ENST00000463020 LAMB2P55268 1798 aa20.77■□□□□ 0.91
SND1-203ENST00000463020 SHTN1A0MZ66 631 aa20.76■□□□□ 0.91
SND1-203ENST00000463020 PAXIP1Q6ZW49 1069 aaPredicted RBP20.76■□□□□ 0.91
SND1-203ENST00000463020 NIM1KQ8IY84 436 aa20.76■□□□□ 0.91
SND1-203ENST00000463020 GPRC5DQ9NZD1 345 aa20.76■□□□□ 0.91
SND1-203ENST00000463020 MAP2K1Q02750 393 aaPredicted RBP20.75■□□□□ 0.91
SND1-203ENST00000463020 CXCL9Q07325 125 aa20.75■□□□□ 0.91
SND1-203ENST00000463020 USP50Q70EL3 339 aaPredicted RBP20.75■□□□□ 0.91
SND1-203ENST00000463020 ATP6V0A2Q9Y487 856 aa20.75■□□□□ 0.91
SND1-203ENST00000463020 TLL2Q9Y6L7 1015 aa20.75■□□□□ 0.91
SND1-203ENST00000463020 COL4A1P02462 1669 aa20.74■□□□□ 0.91
SND1-203ENST00000463020 GMPSP49915 693 aaPredicted RBP20.74■□□□□ 0.91
SND1-203ENST00000463020 DLK2Q6UY11 383 aa20.74■□□□□ 0.91
SND1-203ENST00000463020 TRPM7Q96QT4 1865 aa20.74■□□□□ 0.91
SND1-203ENST00000463020 DUOX1Q9NRD9 1551 aa20.73■□□□□ 0.91
SND1-203ENST00000463020 HCLS1P14317 486 aaPredicted RBP20.73■□□□□ 0.91
SND1-203ENST00000463020 EIF2S2P20042 333 aaKnown RBP20.73■□□□□ 0.91
SND1-203ENST00000463020 HIRAP54198 1017 aaPredicted RBP20.73■□□□□ 0.91
SND1-203ENST00000463020 SLC10A5Q5PT55 438 aa20.73■□□□□ 0.91
SND1-203ENST00000463020 GPR101Q96P66 508 aaPredicted RBP20.73■□□□□ 0.91
SND1-203ENST00000463020 GLIS2Q9BZE0 524 aaPredicted RBP20.73■□□□□ 0.91
SND1-203ENST00000463020 FAM161AQ3B820 660 aa20.72■□□□□ 0.91
SND1-203ENST00000463020 NECTIN2Q92692 538 aa20.72■□□□□ 0.91
SND1-203ENST00000463020 UTP14AQ9BVJ6 771 aaKnown RBP20.72■□□□□ 0.91
SND1-203ENST00000463020 RTFDC1Q9BY42 306 aaPredicted RBP20.72■□□□□ 0.91
SND1-203ENST00000463020 TAF1P21675 1872 aa20.72■□□□□ 0.91
SND1-203ENST00000463020 PPP1R42Q7Z4L9 355 aa20.71■□□□□ 0.91
SND1-203ENST00000463020 TRPM4Q8TD43 1214 aa20.71■□□□□ 0.91
SND1-203ENST00000463020 NLRP3Q96P20 1036 aa20.71■□□□□ 0.91
SND1-203ENST00000463020 ADARB2Q9NS39 739 aaKnown RBP20.71■□□□□ 0.91
SND1-203ENST00000463020 TSPYL4Q9UJ04 414 aa20.71■□□□□ 0.91
SND1-203ENST00000463020 ZNRF3Q9ULT6 936 aa20.71■□□□□ 0.91
SND1-203ENST00000463020 ERBB4Q15303 1308 aa20.71■□□□□ 0.91
SND1-203ENST00000463020 YDJCA8MPS7 323 aa20.7■□□□□ 0.9
SND1-203ENST00000463020 RAD17O75943 681 aa20.7■□□□□ 0.9
SND1-203ENST00000463020 KRT24Q2M2I5 525 aa20.7■□□□□ 0.9
SND1-203ENST00000463020 GRIPAP1Q4V328 841 aa20.7■□□□□ 0.9
SND1-203ENST00000463020 PARP10Q53GL7 1025 aa20.7■□□□□ 0.9
SND1-203ENST00000463020 SAPCD2Q86UD0 394 aa20.7■□□□□ 0.9
SND1-203ENST00000463020 ANKRD36CQ5JPF3 1778 aa20.69■□□□□ 0.9
SND1-203ENST00000463020 CELF2O95319 508 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms