RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CCDC91Q7Z6B0 441 aa18.21■□□□□ 0.5
SMC4-204ENST00000462787 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.5
SMC4-204ENST00000462787 G3V3G9 751 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 HSF2BPO75031 334 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 DCAF8Q5TAQ9 597 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 SPATA31E1Q6ZUB1 1445 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 CNNM1Q9NRU3 951 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 LIG1P18858 919 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 MAP2K1Q02750 393 aaPredicted RBP18.2■□□□□ 0.5
SMC4-204ENST00000462787 LARP1Q6PKG0 1096 aaKnown RBP18.2■□□□□ 0.5
SMC4-204ENST00000462787 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
SMC4-204ENST00000462787 OPA1O60313 960 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
SMC4-204ENST00000462787 CTAGE1Q96RT6 745 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.2■□□□□ 0.52e-10■■■□□ 18.8
SMC4-204ENST00000462787 GOLGA6L10A0A0M3HER8 536 aa18.2■□□□□ 0.5
SMC4-204ENST00000462787 KRT18P05783 430 aaKnown RBP18.2■□□□□ 0.5
SMC4-204ENST00000462787 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
SMC4-204ENST00000462787 CTAGE9A4FU28 777 aa18.19■□□□□ 0.5
SMC4-204ENST00000462787 BRD1O95696 1058 aa18.19■□□□□ 0.5
SMC4-204ENST00000462787 EVCP57679 992 aa18.19■□□□□ 0.5
SMC4-204ENST00000462787 ELF2Q15723 593 aa18.18■□□□□ 0.5
SMC4-204ENST00000462787 SEPT7Q16181 437 aaKnown RBP18.18■□□□□ 0.5
SMC4-204ENST00000462787 DYDC1Q8WWB3 177 aa18.18■□□□□ 0.5
SMC4-204ENST00000462787 TCEAL9Q9UHQ7 104 aa18.18■□□□□ 0.5
SMC4-204ENST00000462787 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
SMC4-204ENST00000462787 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
SMC4-204ENST00000462787 BRF1Q92994 677 aa18.18■□□□□ 0.5
SMC4-204ENST00000462787 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
SMC4-204ENST00000462787 ISM2Q6H9L7 571 aa18.18■□□□□ 0.5
SMC4-204ENST00000462787 RTL1A6NKG5 1358 aa18.18■□□□□ 0.5
SMC4-204ENST00000462787 NEFHP12036 1026 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 IFFO1Q0D2I5 559 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 ZFYVE27Q5T4F4 411 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 NME9Q86XW9 330 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 PLCD3Q8N3E9 789 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 C8orf58Q8NAV2 365 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 CCDC43Q96MW1 224 aaKnown RBP18.17■□□□□ 0.5
SMC4-204ENST00000462787 IFNKQ9P0W0 207 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 MYL6BP14649 208 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
SMC4-204ENST00000462787 PYM1Q9BRP8 204 aaKnown RBP18.17■□□□□ 0.5
SMC4-204ENST00000462787 BMP2KQ9NSY1 1161 aaPredicted RBP18.17■□□□□ 0.5
SMC4-204ENST00000462787 PLB1Q6P1J6 1458 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 HSPA4P34932 840 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 TICAM2Q86XR7 235 aa18.17■□□□□ 0.5
SMC4-204ENST00000462787 KIF6Q6ZMV9 814 aa18.16■□□□□ 0.5
SMC4-204ENST00000462787 CTCFLQ8NI51 663 aaPredicted RBP18.16■□□□□ 0.5
SMC4-204ENST00000462787 RAD21O60216 631 aa18.16■□□□□ 0.5
SMC4-204ENST00000462787 IFIT1P09914 478 aaKnown RBP18.16■□□□□ 0.5
SMC4-204ENST00000462787 TDO2P48775 406 aa18.16■□□□□ 0.5
SMC4-204ENST00000462787 CLSTN2Q9H4D0 955 aa18.16■□□□□ 0.5
SMC4-204ENST00000462787 FAM83GA6ND36 823 aa18.16■□□□□ 0.5
SMC4-204ENST00000462787 SSRP1Q08945 709 aaKnown RBP18.16■□□□□ 0.5
SMC4-204ENST00000462787 AKAP2Q9Y2D5 859 aa18.16■□□□□ 0.5
SMC4-204ENST00000462787 TTC41PQ6P2S7 1318 aa18.16■□□□□ 0.5
SMC4-204ENST00000462787 LMOD1P29536 600 aaPredicted RBP18.16■□□□□ 0.5
SMC4-204ENST00000462787 IMPACTQ9P2X3 320 aa18.16■□□□□ 0.5
SMC4-204ENST00000462787 ZNF213O14771 459 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 FGFR1OPO95684 399 aaKnown RBP18.15■□□□□ 0.5
SMC4-204ENST00000462787 DHX37Q8IY37 1157 aaKnown RBP18.15■□□□□ 0.5
SMC4-204ENST00000462787 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 TSC1Q92574 1164 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 JADE2Q9NQC1 790 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 NOS1P29475 1434 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 SPAG1Q07617 926 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 PZPP20742 1482 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 GBP2P32456 591 aaPredicted RBP18.15■□□□□ 0.5
SMC4-204ENST00000462787 TUBB2AQ13885 445 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 CACNA2D4Q7Z3S7 1137 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 TUBB2BQ9BVA1 445 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 GNL3LQ9NVN8 582 aaKnown RBP18.15■□□□□ 0.5
SMC4-204ENST00000462787 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
SMC4-204ENST00000462787 TTC21BQ7Z4L5 1316 aa18.15■□□□□ 0.5
SMC4-204ENST00000462787 N4BP3O15049 544 aa18.14■□□□□ 0.5
SMC4-204ENST00000462787 GADD45BO75293 160 aaPredicted RBP18.14■□□□□ 0.5
SMC4-204ENST00000462787 GIGYF2Q6Y7W6 1299 aaKnown RBP18.14■□□□□ 0.5
SMC4-204ENST00000462787 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.49
SMC4-204ENST00000462787 SPECC1LQ69YQ0 1117 aa18.14■□□□□ 0.49
SMC4-204ENST00000462787 RUFY3Q7L099 469 aa18.14■□□□□ 0.49
SMC4-204ENST00000462787 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
SMC4-204ENST00000462787 EVA1CP58658 441 aa18.14■□□□□ 0.49
SMC4-204ENST00000462787 ANKRD18AQ8IVF6 992 aa18.14■□□□□ 0.49
SMC4-204ENST00000462787 OTUD6BQ8N6M0 293 aa18.14■□□□□ 0.49
SMC4-204ENST00000462787 GOLGA8AA7E2F4 631 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 PPP2R3AQ06190 1150 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 MAATS1Q7Z4T9 603 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 MTMR7Q9Y216 660 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 GCOM1H8Y6P7 765 aaPredicted RBP18.13■□□□□ 0.49
SMC4-204ENST00000462787 MYZAPP0CAP1 466 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 TATP17735 454 aaPredicted RBP18.13■□□□□ 0.49
SMC4-204ENST00000462787 IARSP41252 1262 aaKnown RBP18.13■□□□□ 0.49
SMC4-204ENST00000462787 HLTFQ14527 1009 aaKnown RBP eCLIP18.13■□□□□ 0.495e-35■■■■■ 127.1
SMC4-204ENST00000462787 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 ANKRD24Q8TF21 1146 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 CARD14Q9BXL6 1004 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 BCCIPQ9P287 314 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMC4-204ENST00000462787 SLC12A7Q9Y666 1083 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 PPM1EQ8WY54 764 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms