RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 BRPF1P55201 1214 aaPredicted RBP8.08□□□□□ -1.12
SF3B1-206ENST00000462613 TGFB2P61812 414 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 DDR1Q08345 913 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 G2E3Q7L622 706 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 MRPL50Q8N5N7 158 aaKnown RBP8.08□□□□□ -1.12
SF3B1-206ENST00000462613 LINS1Q8NG48 757 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 FRAT1Q92837 279 aaPredicted RBP8.08□□□□□ -1.12
SF3B1-206ENST00000462613 HDAC5Q9UQL6 1122 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 C10orf71Q711Q0 1435 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 ARFGEF1Q9Y6D6 1849 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 CHD4Q14839 1912 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 DDX60Q8IY21 1712 aaKnown RBP8.07□□□□□ -1.12
SF3B1-206ENST00000462613 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 TRIM28Q13263 835 aaKnown RBP8.07□□□□□ -1.12
SF3B1-206ENST00000462613 ZKSCAN2Q63HK3 967 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 PRR5LQ6MZQ0 368 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 NLRP10Q86W26 655 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 FTSJ3Q8IY81 847 aaKnown RBP8.07□□□□□ -1.12
SF3B1-206ENST00000462613 ARHGAP45Q92619 1136 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 NLRP3Q96P20 1036 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 SYT17Q9BSW7 474 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 ISCA1Q9BUE6 129 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 BRIP1Q9BX63 1249 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 SRCIN1Q9C0H9 1055 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 RCAN3Q9UKA8 241 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 ADCY9O60503 1353 aa8.07□□□□□ -1.12
SF3B1-206ENST00000462613 UBN2Q6ZU65 1347 aa8.06□□□□□ -1.12
SF3B1-206ENST00000462613 RIC1Q4ADV7 1423 aa8.06□□□□□ -1.12
SF3B1-206ENST00000462613 ALDH1L1O75891 902 aa8.06□□□□□ -1.12
SF3B1-206ENST00000462613 CCT4P50991 539 aaKnown RBP8.06□□□□□ -1.12
SF3B1-206ENST00000462613 SUSD4Q5VX71 490 aa8.06□□□□□ -1.12
SF3B1-206ENST00000462613 ZBTB38Q8NAP3 1195 aaPredicted RBP8.06□□□□□ -1.12
SF3B1-206ENST00000462613 RPGRQ92834 1020 aaKnown RBP8.06□□□□□ -1.12
SF3B1-206ENST00000462613 TMX4Q9H1E5 349 aaPredicted RBP8.06□□□□□ -1.12
SF3B1-206ENST00000462613 C9orf78Q9NZ63 289 aaPredicted RBP8.06□□□□□ -1.12
SF3B1-206ENST00000462613 NOB1Q9ULX3 412 aaKnown RBP8.06□□□□□ -1.12
SF3B1-206ENST00000462613 CCDC88AQ3V6T2 1871 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 NEURL1BA8MQ27 555 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 F6X3S4 739 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 NTSR2O95665 410 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 PCCAP05165 728 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-206ENST00000462613 CWF19L2Q2TBE0 894 aaKnown RBP8.05□□□□□ -1.12
SF3B1-206ENST00000462613 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 ATF7IPQ6VMQ6 1270 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 NUTM1Q86Y26 1132 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 C2CD5Q86YS7 1000 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 PELP1Q8IZL8 1130 aaKnown RBP8.05□□□□□ -1.12
SF3B1-206ENST00000462613 CNKSR1Q969H4 720 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 CHMP4BQ9H444 224 aaKnown RBP8.05□□□□□ -1.12
SF3B1-206ENST00000462613 PIM2Q9P1W9 311 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 COL11A2P13942 1736 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-206ENST00000462613 KIAA1551Q9HCM1 1747 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 SPEF2Q9C093 1822 aa8.05□□□□□ -1.12
SF3B1-206ENST00000462613 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
SF3B1-206ENST00000462613 BCAR3O75815 825 aa8.04□□□□□ -1.12
SF3B1-206ENST00000462613 NPR1P16066 1061 aa8.04□□□□□ -1.12
SF3B1-206ENST00000462613 ALDH1B1P30837 517 aa8.04□□□□□ -1.12
SF3B1-206ENST00000462613 GCKRQ14397 625 aa8.04□□□□□ -1.12
SF3B1-206ENST00000462613 GPR162Q16538 588 aa8.04□□□□□ -1.12
SF3B1-206ENST00000462613 RTL5Q5HYW3 569 aaPredicted RBP8.04□□□□□ -1.12
SF3B1-206ENST00000462613 ZNF622Q969S3 477 aaKnown RBP eCLIP8.04□□□□□ -1.12
SF3B1-206ENST00000462613 FAM89AQ96GI7 184 aa8.04□□□□□ -1.12
SF3B1-206ENST00000462613 MASTLQ96GX5 879 aa8.04□□□□□ -1.12
SF3B1-206ENST00000462613 TNRC6CQ9HCJ0 1690 aaKnown RBP8.04□□□□□ -1.12
SF3B1-206ENST00000462613 CDHR2Q9BYE9 1310 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 TAF1P21675 1872 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 A0A0G2JLW4 131 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 GRM8O00222 908 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 PDE8AO60658 829 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 IGKV5-2P06315 115 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 DPEP1P16444 411 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 CCDC152Q4G0S7 254 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 DALRD3Q5D0E6 543 aaKnown RBP8.03□□□□□ -1.12
SF3B1-206ENST00000462613 SLC10A5Q5PT55 438 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 BEND3Q5T5X7 828 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 SOGA3Q5TF21 947 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 STYK1Q6J9G0 422 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 DDX46Q7L014 1031 aaKnown RBP8.03□□□□□ -1.12
SF3B1-206ENST00000462613 UBE3BQ7Z3V4 1068 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 CCDC24Q8N4L8 307 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 TTLL6Q8N841 843 aa8.03□□□□□ -1.12
SF3B1-206ENST00000462613 RBM17Q96I25 401 aaKnown RBP8.03□□□□□ -1.12
SF3B1-206ENST00000462613 ABCC12Q96J65 1359 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 SLX4Q8IY92 1834 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 GRIN3BO60391 1043 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 GNAI3P08754 354 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 SRGNP10124 158 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 HCLS1P14317 486 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-206ENST00000462613 TRIM27P14373 513 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 CHRNA5P30532 468 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 DZIP1LQ8IYY4 767 aaKnown RBP8.02□□□□□ -1.13
SF3B1-206ENST00000462613 NLGN2Q8NFZ4 835 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 CLUAP1Q96AJ1 413 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 BCS1LQ9Y276 419 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 ABCC4O15439 1325 aa8.02□□□□□ -1.13
SF3B1-206ENST00000462613 KLRG2A4D1S0 409 aaPredicted RBP8.01□□□□□ -1.13
SF3B1-206ENST00000462613 H7C1W4 665 aa8.01□□□□□ -1.13
SF3B1-206ENST00000462613 UBTFL1P0CB47 393 aaPredicted RBP8.01□□□□□ -1.13
SF3B1-206ENST00000462613 GRIPAP1Q4V328 841 aa8.01□□□□□ -1.13
SF3B1-206ENST00000462613 TAF7LQ5H9L4 462 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms