RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 AFDNP55196 1824 aaKnown RBP12.17□□□□□ -0.46
PKP4-208ENST00000462335 CT47B1P0C2W7 299 aaPredicted RBP12.17□□□□□ -0.46
PKP4-208ENST00000462335 NPR1P16066 1061 aa12.17□□□□□ -0.46
PKP4-208ENST00000462335 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
PKP4-208ENST00000462335 STYK1Q6J9G0 422 aa12.17□□□□□ -0.46
PKP4-208ENST00000462335 SLC4A10Q6U841 1118 aa12.17□□□□□ -0.46
PKP4-208ENST00000462335 LRP10Q7Z4F1 713 aa12.17□□□□□ -0.46
PKP4-208ENST00000462335 METTL22Q9BUU2 404 aaPredicted RBP12.17□□□□□ -0.46
PKP4-208ENST00000462335 SMC4Q9NTJ3 1288 aa12.17□□□□□ -0.46
PKP4-208ENST00000462335 RNF123Q5XPI4 1314 aa12.16□□□□□ -0.46
PKP4-208ENST00000462335 YY1P25490 414 aa12.16□□□□□ -0.46
PKP4-208ENST00000462335 CCDC191Q8NCU4 936 aa12.16□□□□□ -0.46
PKP4-208ENST00000462335 CACNA1FO60840 1977 aa12.16□□□□□ -0.46
PKP4-208ENST00000462335 N4BP2Q86UW6 1770 aaPredicted RBP12.15□□□□□ -0.46
PKP4-208ENST00000462335 UBN2Q6ZU65 1347 aa12.15□□□□□ -0.46
PKP4-208ENST00000462335 HCLS1P14317 486 aaPredicted RBP12.15□□□□□ -0.46
PKP4-208ENST00000462335 YBX3P16989 372 aaKnown RBP eCLIP12.15□□□□□ -0.463e-8■□□□□ 8.2
PKP4-208ENST00000462335 TRIM28Q13263 835 aaKnown RBP12.15□□□□□ -0.46
PKP4-208ENST00000462335 SOGA3Q5TF21 947 aa12.15□□□□□ -0.46
PKP4-208ENST00000462335 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
PKP4-208ENST00000462335 G2E3Q7L622 706 aa12.15□□□□□ -0.46
PKP4-208ENST00000462335 DNAAF4Q8WXU2 420 aa12.15□□□□□ -0.46
PKP4-208ENST00000462335 FAM89AQ96GI7 184 aa12.15□□□□□ -0.46
PKP4-208ENST00000462335 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
PKP4-208ENST00000462335 NTSR2O95665 410 aa12.14□□□□□ -0.47
PKP4-208ENST00000462335 SRGNP10124 158 aa12.14□□□□□ -0.47
PKP4-208ENST00000462335 ALDH1L2Q3SY69 923 aa12.14□□□□□ -0.47
PKP4-208ENST00000462335 ZBTB38Q8NAP3 1195 aaPredicted RBP12.14□□□□□ -0.47
PKP4-208ENST00000462335 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
PKP4-208ENST00000462335 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
PKP4-208ENST00000462335 IBTKQ9P2D0 1353 aaPredicted RBP12.14□□□□□ -0.47
PKP4-208ENST00000462335 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
PKP4-208ENST00000462335 IRS4O14654 1257 aaPredicted RBP12.13□□□□□ -0.47
PKP4-208ENST00000462335 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
PKP4-208ENST00000462335 C21orf2O43822 256 aa12.13□□□□□ -0.47
PKP4-208ENST00000462335 KCNA3P22001 575 aa12.13□□□□□ -0.47
PKP4-208ENST00000462335 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
PKP4-208ENST00000462335 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
PKP4-208ENST00000462335 KIF13BQ9NQT8 1826 aa12.13□□□□□ -0.47
PKP4-208ENST00000462335 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
PKP4-208ENST00000462335 TRMT2AQ8IZ69 625 aaKnown RBP12.12□□□□□ -0.47
PKP4-208ENST00000462335 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
PKP4-208ENST00000462335 SSH1Q8WYL5 1049 aa12.12□□□□□ -0.47
PKP4-208ENST00000462335 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
PKP4-208ENST00000462335 PTPRCP08575 1304 aa12.11□□□□□ -0.47
PKP4-208ENST00000462335 F6X3S4 739 aa12.11□□□□□ -0.47
PKP4-208ENST00000462335 PCCAP05165 728 aaPredicted RBP12.11□□□□□ -0.47
PKP4-208ENST00000462335 CWF19L2Q2TBE0 894 aaKnown RBP12.11□□□□□ -0.47
PKP4-208ENST00000462335 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
PKP4-208ENST00000462335 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
PKP4-208ENST00000462335 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
PKP4-208ENST00000462335 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
PKP4-208ENST00000462335 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
PKP4-208ENST00000462335 NEURL1BA8MQ27 555 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 PDE8AO60658 829 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 BBOX1O75936 387 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 UBE3BQ7Z3V4 1068 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 FRAT1Q92837 279 aaPredicted RBP12.1□□□□□ -0.47
PKP4-208ENST00000462335 CRAMP1Q96RY5 1269 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 API5Q9BZZ5 524 aaKnown RBP12.1□□□□□ -0.47
PKP4-208ENST00000462335 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
PKP4-208ENST00000462335 ADCY9O60503 1353 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 ABCC12Q96J65 1359 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
PKP4-208ENST00000462335 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
PKP4-208ENST00000462335 GCKRQ14397 625 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 GRIPAP1Q4V328 841 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 CC2D2BQ6DHV5 1058 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 NOB1Q9ULX3 412 aaKnown RBP12.09□□□□□ -0.47
PKP4-208ENST00000462335 HDAC5Q9UQL6 1122 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 KIF16BQ96L93 1317 aa12.09□□□□□ -0.47
PKP4-208ENST00000462335 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
PKP4-208ENST00000462335 IGKV5-2P06315 115 aa12.08□□□□□ -0.48
PKP4-208ENST00000462335 HOXA10P31260 410 aaPredicted RBP12.08□□□□□ -0.48
PKP4-208ENST00000462335 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
PKP4-208ENST00000462335 CRY2Q49AN0 593 aa12.08□□□□□ -0.48
PKP4-208ENST00000462335 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
PKP4-208ENST00000462335 RNF181Q9P0P0 153 aa12.08□□□□□ -0.48
PKP4-208ENST00000462335 CHD4Q14839 1912 aa12.07□□□□□ -0.48
PKP4-208ENST00000462335 CCT4P50991 539 aaKnown RBP12.07□□□□□ -0.48
PKP4-208ENST00000462335 TAF7LQ5H9L4 462 aa12.07□□□□□ -0.48
PKP4-208ENST00000462335 C9orf131Q5VYM1 1079 aa12.07□□□□□ -0.48
PKP4-208ENST00000462335 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
PKP4-208ENST00000462335 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
PKP4-208ENST00000462335 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
PKP4-208ENST00000462335 TAOK3Q9H2K8 898 aa12.07□□□□□ -0.48
PKP4-208ENST00000462335 G3V3G9 751 aa12.06□□□□□ -0.48
PKP4-208ENST00000462335 LMNB1P20700 586 aa12.06□□□□□ -0.48
PKP4-208ENST00000462335 GRAPQ13588 217 aa12.06□□□□□ -0.48
PKP4-208ENST00000462335 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
PKP4-208ENST00000462335 BEND3Q5T5X7 828 aa12.06□□□□□ -0.48
PKP4-208ENST00000462335 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
PKP4-208ENST00000462335 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
PKP4-208ENST00000462335 FTSJ3Q8IY81 847 aaKnown RBP12.06□□□□□ -0.48
PKP4-208ENST00000462335 SUPT20HQ8NEM7 779 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms