RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 UBE3BQ7Z3V4 1068 aa12.28□□□□□ -0.44
C9orf78-203ENST00000461539 NBPF5PQ86XG9 351 aaPredicted RBP12.28□□□□□ -0.44
C9orf78-203ENST00000461539 SLC16A10Q8TF71 515 aa12.28□□□□□ -0.44
C9orf78-203ENST00000461539 FAM89AQ96GI7 184 aa12.28□□□□□ -0.44
C9orf78-203ENST00000461539 RREB1Q92766 1687 aa12.28□□□□□ -0.44
C9orf78-203ENST00000461539 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
C9orf78-203ENST00000461539 RGPD4Q7Z3J3 1758 aa12.28□□□□□ -0.44
C9orf78-203ENST00000461539 H7C1W4 665 aa12.27□□□□□ -0.45
C9orf78-203ENST00000461539 SOCS7O14512 581 aa12.27□□□□□ -0.45
C9orf78-203ENST00000461539 PCCAP05165 728 aaPredicted RBP12.27□□□□□ -0.45
C9orf78-203ENST00000461539 MMP10P09238 476 aa12.27□□□□□ -0.45
C9orf78-203ENST00000461539 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
C9orf78-203ENST00000461539 TM4SF1P30408 202 aa12.27□□□□□ -0.45
C9orf78-203ENST00000461539 ZBTB38Q8NAP3 1195 aaPredicted RBP12.27□□□□□ -0.45
C9orf78-203ENST00000461539 NYXQ9GZU5 481 aa12.27□□□□□ -0.45
C9orf78-203ENST00000461539 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.45
C9orf78-203ENST00000461539 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.45
C9orf78-203ENST00000461539 COL5A3P25940 1745 aaPredicted RBP12.27□□□□□ -0.45
C9orf78-203ENST00000461539 SH3TC1Q8TE82 1336 aa12.27□□□□□ -0.45
C9orf78-203ENST00000461539 ZBTB7AO95365 584 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 NTSR2O95665 410 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 GNAI2P04899 355 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 SERPINB2P05120 415 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 DDR1Q08345 913 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 SYNE4Q8N205 404 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 SUCLG2Q96I99 432 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 C1orf115Q9H7X2 142 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 CARMIL3Q8ND23 1372 aa12.26□□□□□ -0.45
C9orf78-203ENST00000461539 POLRMTO00411 1230 aaKnown RBP12.25□□□□□ -0.45
C9orf78-203ENST00000461539 IRS4O14654 1257 aaPredicted RBP12.25□□□□□ -0.45
C9orf78-203ENST00000461539 AAMPQ13685 434 aa12.25□□□□□ -0.45
C9orf78-203ENST00000461539 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
C9orf78-203ENST00000461539 CNBD1Q8NA66 436 aa12.25□□□□□ -0.45
C9orf78-203ENST00000461539 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
C9orf78-203ENST00000461539 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
C9orf78-203ENST00000461539 UTYO14607 1347 aa12.25□□□□□ -0.45
C9orf78-203ENST00000461539 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
C9orf78-203ENST00000461539 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
C9orf78-203ENST00000461539 CASP7P55210 303 aa12.24□□□□□ -0.45
C9orf78-203ENST00000461539 ERFEQ4G0M1 354 aa12.24□□□□□ -0.45
C9orf78-203ENST00000461539 MYH14Q7Z406 1995 aaKnown RBP12.24□□□□□ -0.45
C9orf78-203ENST00000461539 MTFR1LQ9H019 292 aa12.24□□□□□ -0.45
C9orf78-203ENST00000461539 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
C9orf78-203ENST00000461539 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
C9orf78-203ENST00000461539 ST5P78524 1137 aa12.23□□□□□ -0.45
C9orf78-203ENST00000461539 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
C9orf78-203ENST00000461539 POLD1P28340 1107 aa12.22□□□□□ -0.45
C9orf78-203ENST00000461539 EPHA10Q5JZY3 1008 aa12.22□□□□□ -0.45
C9orf78-203ENST00000461539 ERICH6BQ5W0A0 696 aa12.22□□□□□ -0.45
C9orf78-203ENST00000461539 BICC1Q9H694 974 aaKnown RBP12.22□□□□□ -0.45
C9orf78-203ENST00000461539 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
C9orf78-203ENST00000461539 PCDHB15Q9Y5E8 787 aa12.22□□□□□ -0.45
C9orf78-203ENST00000461539 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
C9orf78-203ENST00000461539 PDE8AO60658 829 aa12.21□□□□□ -0.45
C9orf78-203ENST00000461539 SLC10A5Q5PT55 438 aa12.21□□□□□ -0.45
C9orf78-203ENST00000461539 LMBR1LQ6UX01 489 aa12.21□□□□□ -0.45
C9orf78-203ENST00000461539 KAZALD1Q96I82 304 aa12.21□□□□□ -0.45
C9orf78-203ENST00000461539 CCDC85AQ96PX6 553 aaPredicted RBP12.21□□□□□ -0.45
C9orf78-203ENST00000461539 PLA2G12BQ9BX93 195 aa12.21□□□□□ -0.45
C9orf78-203ENST00000461539 GTF3C3Q9Y5Q9 886 aa12.21□□□□□ -0.45
C9orf78-203ENST00000461539 TAF1LQ8IZX4 1826 aa12.21□□□□□ -0.46
C9orf78-203ENST00000461539 ABCC12Q96J65 1359 aa12.2□□□□□ -0.46
C9orf78-203ENST00000461539 CTSWP56202 376 aa12.2□□□□□ -0.46
C9orf78-203ENST00000461539 FOXO4P98177 505 aa12.2□□□□□ -0.46
C9orf78-203ENST00000461539 CEP85Q6P2H3 762 aa12.2□□□□□ -0.46
C9orf78-203ENST00000461539 RPAP2Q8IXW5 612 aaPredicted RBP12.2□□□□□ -0.46
C9orf78-203ENST00000461539 ANKRD44Q8N8A2 993 aa12.2□□□□□ -0.46
C9orf78-203ENST00000461539 NLRP3Q96P20 1036 aa12.2□□□□□ -0.46
C9orf78-203ENST00000461539 SRGAP3O43295 1099 aa12.19□□□□□ -0.46
C9orf78-203ENST00000461539 HMMRO75330 724 aa12.19□□□□□ -0.46
C9orf78-203ENST00000461539 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
C9orf78-203ENST00000461539 PNMA6EA0A0J9YXQ4 647 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 RABL6Q3YEC7 729 aaPredicted RBP12.18□□□□□ -0.46
C9orf78-203ENST00000461539 CCDC152Q4G0S7 254 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 TTLL11Q8NHH1 800 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 BRIP1Q9BX63 1249 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 SPON1Q9HCB6 807 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 PPP4R2Q9NY27 417 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 SCN7AQ01118 1682 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 UBR3Q6ZT12 1888 aa12.18□□□□□ -0.46
C9orf78-203ENST00000461539 CSF1RP07333 972 aa12.17□□□□□ -0.46
C9orf78-203ENST00000461539 IFIT5Q13325 482 aaKnown RBP12.17□□□□□ -0.46
C9orf78-203ENST00000461539 MTX1Q13505 466 aa12.17□□□□□ -0.46
C9orf78-203ENST00000461539 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
C9orf78-203ENST00000461539 CCDC57Q2TAC2 916 aa12.17□□□□□ -0.46
C9orf78-203ENST00000461539 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
C9orf78-203ENST00000461539 SIRT2Q8IXJ6 389 aa12.17□□□□□ -0.46
C9orf78-203ENST00000461539 CCDC136Q96JN2 1154 aa12.17□□□□□ -0.46
C9orf78-203ENST00000461539 RWDD1Q9H446 243 aaPredicted RBP12.17□□□□□ -0.46
C9orf78-203ENST00000461539 GREM2Q9H772 168 aa12.17□□□□□ -0.46
C9orf78-203ENST00000461539 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
C9orf78-203ENST00000461539 ITGA6P23229 1130 aa12.16□□□□□ -0.46
C9orf78-203ENST00000461539 PDE6BP35913 854 aa12.16□□□□□ -0.46
C9orf78-203ENST00000461539 TAF7LQ5H9L4 462 aa12.16□□□□□ -0.46
C9orf78-203ENST00000461539 B4GALNT3Q6L9W6 998 aa12.16□□□□□ -0.46
C9orf78-203ENST00000461539 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms