RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 UTP14AQ9BVJ6 771 aaKnown RBP23.06■■□□□ 1.28
COL1A2-202ENST00000461525 HOXB7P09629 217 aa23.05■■□□□ 1.28
COL1A2-202ENST00000461525 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
COL1A2-202ENST00000461525 RBM17Q96I25 401 aaKnown RBP23.05■■□□□ 1.28
COL1A2-202ENST00000461525 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
COL1A2-202ENST00000461525 NUP98P52948 1817 aa23.05■■□□□ 1.28
COL1A2-202ENST00000461525 CACNA1SQ13698 1873 aa23.05■■□□□ 1.28
COL1A2-202ENST00000461525 CC2D2BQ6DHV5 1058 aa23.04■■□□□ 1.28
COL1A2-202ENST00000461525 DNAJC5GQ8N7S2 189 aa23.04■■□□□ 1.28
COL1A2-202ENST00000461525 CHPF2Q9P2E5 772 aa23.04■■□□□ 1.28
COL1A2-202ENST00000461525 WDR90Q96KV7 1748 aa23.04■■□□□ 1.28
COL1A2-202ENST00000461525 RNF123Q5XPI4 1314 aa23.04■■□□□ 1.28
COL1A2-202ENST00000461525 APAF1O14727 1248 aa23.03■■□□□ 1.28
COL1A2-202ENST00000461525 HTRA3P83110 453 aa23.03■■□□□ 1.28
COL1A2-202ENST00000461525 SYNE4Q8N205 404 aa23.03■■□□□ 1.28
COL1A2-202ENST00000461525 NLRP3Q96P20 1036 aa23.03■■□□□ 1.28
COL1A2-202ENST00000461525 CRAMP1Q96RY5 1269 aa23.03■■□□□ 1.28
COL1A2-202ENST00000461525 CCDC88AQ3V6T2 1871 aa23.02■■□□□ 1.28
COL1A2-202ENST00000461525 IARSP41252 1262 aaKnown RBP23.02■■□□□ 1.28
COL1A2-202ENST00000461525 C3orf67Q6ZVT6 689 aa23.02■■□□□ 1.28
COL1A2-202ENST00000461525 PSMD1Q99460 953 aa23.02■■□□□ 1.28
COL1A2-202ENST00000461525 PPEF1O14829 653 aaPredicted RBP23.01■■□□□ 1.27
COL1A2-202ENST00000461525 CALD1Q05682 793 aaKnown RBP23.01■■□□□ 1.27
COL1A2-202ENST00000461525 TCIRG1Q13488 830 aa23.01■■□□□ 1.27
COL1A2-202ENST00000461525 SLC10A5Q5PT55 438 aa23.01■■□□□ 1.27
COL1A2-202ENST00000461525 DUSP27Q5VZP5 1158 aa23.01■■□□□ 1.27
COL1A2-202ENST00000461525 NLRP10Q86W26 655 aa23.01■■□□□ 1.27
COL1A2-202ENST00000461525 MBIPQ9NS73 344 aa23.01■■□□□ 1.27
COL1A2-202ENST00000461525 DBF4Q9UBU7 674 aaPredicted RBP23.01■■□□□ 1.27
COL1A2-202ENST00000461525 SNED1Q8TER0 1413 aa23■■□□□ 1.27
COL1A2-202ENST00000461525 DICER1Q9UPY3 1922 aaKnown RBP23■■□□□ 1.27
COL1A2-202ENST00000461525 IQCA1LA6NCM1 817 aa23■■□□□ 1.27
COL1A2-202ENST00000461525 L3MBTL3Q96JM7 780 aaPredicted RBP23■■□□□ 1.27
COL1A2-202ENST00000461525 ZNF541Q9H0D2 1346 aa23■■□□□ 1.27
COL1A2-202ENST00000461525 ZEB1P37275 1124 aaPredicted RBP22.99■■□□□ 1.27
COL1A2-202ENST00000461525 GRIPAP1Q4V328 841 aa22.99■■□□□ 1.27
COL1A2-202ENST00000461525 IFT57Q9NWB7 429 aa22.99■■□□□ 1.27
COL1A2-202ENST00000461525 TCERG1O14776 1098 aaKnown RBP22.98■■□□□ 1.27
COL1A2-202ENST00000461525 ZNF853P0CG23 659 aa22.98■■□□□ 1.27
COL1A2-202ENST00000461525 PLBD2Q8NHP8 589 aa22.98■■□□□ 1.27
COL1A2-202ENST00000461525 JDP2Q8WYK2 163 aa22.98■■□□□ 1.27
COL1A2-202ENST00000461525 KLRG1Q96E93 195 aa22.98■■□□□ 1.27
COL1A2-202ENST00000461525 TRMT112Q9UI30 125 aaKnown RBP22.98■■□□□ 1.27
COL1A2-202ENST00000461525 GNAI1P63096 354 aa22.97■■□□□ 1.27
COL1A2-202ENST00000461525 TMX4Q9H1E5 349 aaPredicted RBP22.97■■□□□ 1.27
COL1A2-202ENST00000461525 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
COL1A2-202ENST00000461525 SH3TC1Q8TE82 1336 aa22.97■■□□□ 1.27
COL1A2-202ENST00000461525 FZD9O00144 591 aa22.96■■□□□ 1.27
COL1A2-202ENST00000461525 HCLS1P14317 486 aaPredicted RBP22.96■■□□□ 1.27
COL1A2-202ENST00000461525 CHADLQ6NUI6 762 aa22.96■■□□□ 1.27
COL1A2-202ENST00000461525 ANKRD13DQ6ZTN6 518 aa22.96■■□□□ 1.27
COL1A2-202ENST00000461525 ABCC4O15439 1325 aa22.95■■□□□ 1.26
COL1A2-202ENST00000461525 POTEIP0CG38 1075 aa22.95■■□□□ 1.26
COL1A2-202ENST00000461525 POTEJP0CG39 1038 aa22.95■■□□□ 1.26
COL1A2-202ENST00000461525 SLC51AQ86UW1 340 aa22.95■■□□□ 1.26
COL1A2-202ENST00000461525 TAF1DQ9H5J8 278 aaPredicted RBP22.95■■□□□ 1.26
COL1A2-202ENST00000461525 LARGE2Q8N3Y3 721 aa22.94■■□□□ 1.26
COL1A2-202ENST00000461525 ATP6V0A2Q9Y487 856 aa22.94■■□□□ 1.26
COL1A2-202ENST00000461525 EIF6P56537 245 aaKnown RBP22.93■■□□□ 1.26
COL1A2-202ENST00000461525 HACL1Q9UJ83 578 aa22.93■■□□□ 1.26
COL1A2-202ENST00000461525 ELL2O00472 640 aaPredicted RBP22.92■■□□□ 1.26
COL1A2-202ENST00000461525 DDX46Q7L014 1031 aaKnown RBP22.92■■□□□ 1.26
COL1A2-202ENST00000461525 LDHDQ86WU2 507 aa22.92■■□□□ 1.26
COL1A2-202ENST00000461525 GPC2Q8N158 579 aa22.92■■□□□ 1.26
COL1A2-202ENST00000461525 ISCA1Q9BUE6 129 aa22.92■■□□□ 1.26
COL1A2-202ENST00000461525 BBOX1O75936 387 aa22.91■■□□□ 1.26
COL1A2-202ENST00000461525 CCDC184Q52MB2 194 aa22.91■■□□□ 1.26
COL1A2-202ENST00000461525 ZNF428Q96B54 188 aa22.91■■□□□ 1.26
COL1A2-202ENST00000461525 ATP5J2-PTCD1G3V325 749 aa22.9■■□□□ 1.26
COL1A2-202ENST00000461525 EPHX2P34913 555 aa22.9■■□□□ 1.26
COL1A2-202ENST00000461525 GOLGA2Q08379 1002 aa22.9■■□□□ 1.26
COL1A2-202ENST00000461525 EAPPQ56P03 285 aaPredicted RBP22.9■■□□□ 1.26
COL1A2-202ENST00000461525 JMYQ8N9B5 988 aa22.9■■□□□ 1.26
COL1A2-202ENST00000461525 ANKRD36CQ5JPF3 1778 aa22.89■■□□□ 1.26
COL1A2-202ENST00000461525 PPIP5K2O43314 1243 aa22.89■■□□□ 1.25
COL1A2-202ENST00000461525 GRAPQ13588 217 aa22.89■■□□□ 1.25
COL1A2-202ENST00000461525 NIM1KQ8IY84 436 aa22.89■■□□□ 1.25
COL1A2-202ENST00000461525 GRAPLQ8TC17 118 aaPredicted RBP22.89■■□□□ 1.25
COL1A2-202ENST00000461525 GJA3Q9Y6H8 435 aa22.89■■□□□ 1.25
COL1A2-202ENST00000461525 COL4A5P29400 1685 aa22.88■■□□□ 1.25
COL1A2-202ENST00000461525 RIC3Q7Z5B4 369 aa22.88■■□□□ 1.25
COL1A2-202ENST00000461525 SP8Q8IXZ3 490 aa22.88■■□□□ 1.25
COL1A2-202ENST00000461525 C8orf58Q8NAV2 365 aa22.88■■□□□ 1.25
COL1A2-202ENST00000461525 SUPT20HQ8NEM7 779 aa22.88■■□□□ 1.25
COL1A2-202ENST00000461525 FAM89AQ96GI7 184 aa22.88■■□□□ 1.25
COL1A2-202ENST00000461525 TRIM28Q13263 835 aaKnown RBP22.87■■□□□ 1.25
COL1A2-202ENST00000461525 AOC3Q16853 763 aa22.87■■□□□ 1.25
COL1A2-202ENST00000461525 DPP8Q6V1X1 898 aaPredicted RBP22.87■■□□□ 1.25
COL1A2-202ENST00000461525 PNMA8AQ86V59 439 aaPredicted RBP22.87■■□□□ 1.25
COL1A2-202ENST00000461525 CHMP4AQ9BY43 222 aa22.87■■□□□ 1.25
COL1A2-202ENST00000461525 VPS33BQ9H267 617 aa22.87■■□□□ 1.25
COL1A2-202ENST00000461525 PHAXQ9H814 394 aaKnown RBP22.87■■□□□ 1.25
COL1A2-202ENST00000461525 MPNDQ8N594 471 aa22.86■■□□□ 1.25
COL1A2-202ENST00000461525 RTFDC1Q9BY42 306 aaPredicted RBP22.86■■□□□ 1.25
COL1A2-202ENST00000461525 CLEC11AQ9Y240 323 aa22.86■■□□□ 1.25
COL1A2-202ENST00000461525 SCN4AP35499 1836 aa22.85■■□□□ 1.25
COL1A2-202ENST00000461525 LMOD1P29536 600 aaPredicted RBP22.85■■□□□ 1.25
COL1A2-202ENST00000461525 CCDC30Q5VVM6 783 aa22.85■■□□□ 1.25
COL1A2-202ENST00000461525 TMC4Q7Z404 712 aa22.85■■□□□ 1.25
COL1A2-202ENST00000461525 CREBZFQ9NS37 354 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms