RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
VPS45-204ENST00000460366 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
VPS45-204ENST00000460366 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
VPS45-204ENST00000460366 GYS1P13807 737 aa12.75□□□□□ -0.37
VPS45-204ENST00000460366 MYL6BP14649 208 aa12.75□□□□□ -0.37
VPS45-204ENST00000460366 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
VPS45-204ENST00000460366 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
VPS45-204ENST00000460366 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
VPS45-204ENST00000460366 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
VPS45-204ENST00000460366 TBC1D2BQ9UPU7 963 aa12.75□□□□□ -0.37
VPS45-204ENST00000460366 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
VPS45-204ENST00000460366 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
VPS45-204ENST00000460366 ZBTB7AO95365 584 aa12.74□□□□□ -0.37
VPS45-204ENST00000460366 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
VPS45-204ENST00000460366 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
VPS45-204ENST00000460366 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
VPS45-204ENST00000460366 L3MBTL3Q96JM7 780 aaPredicted RBP12.74□□□□□ -0.37
VPS45-204ENST00000460366 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
VPS45-204ENST00000460366 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
VPS45-204ENST00000460366 ZNF652Q9Y2D9 606 aa12.74□□□□□ -0.37
VPS45-204ENST00000460366 ANXA1P04083 346 aa12.73□□□□□ -0.37
VPS45-204ENST00000460366 TM4SF1P30408 202 aa12.73□□□□□ -0.37
VPS45-204ENST00000460366 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
VPS45-204ENST00000460366 KIF6Q6ZMV9 814 aa12.73□□□□□ -0.37
VPS45-204ENST00000460366 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
VPS45-204ENST00000460366 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
VPS45-204ENST00000460366 ARXQ96QS3 562 aa12.73□□□□□ -0.37
VPS45-204ENST00000460366 POLD1P28340 1107 aa12.72□□□□□ -0.37
VPS45-204ENST00000460366 PTGER2P43116 358 aa12.72□□□□□ -0.37
VPS45-204ENST00000460366 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
VPS45-204ENST00000460366 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
VPS45-204ENST00000460366 PLBD2Q8NHP8 589 aa12.72□□□□□ -0.37
VPS45-204ENST00000460366 DDX58O95786 925 aaKnown RBP12.71□□□□□ -0.37
VPS45-204ENST00000460366 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.37
VPS45-204ENST00000460366 MMP10P09238 476 aa12.7□□□□□ -0.38
VPS45-204ENST00000460366 AIMP1Q12904 312 aaKnown RBP12.7□□□□□ -0.38
VPS45-204ENST00000460366 NFIXQ14938 502 aa12.7□□□□□ -0.38
VPS45-204ENST00000460366 HSP90AB3PQ58FF7 597 aa12.7□□□□□ -0.38
VPS45-204ENST00000460366 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
VPS45-204ENST00000460366 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
VPS45-204ENST00000460366 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
VPS45-204ENST00000460366 C4AP0C0L4 1744 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 COL24A1Q17RW2 1714 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 TCERG1O14776 1098 aaKnown RBP12.69□□□□□ -0.38
VPS45-204ENST00000460366 RARSP54136 660 aaKnown RBP12.69□□□□□ -0.38
VPS45-204ENST00000460366 FLIIQ13045 1269 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 HLFQ16534 295 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 LCE2DQ5TA82 110 aaPredicted RBP12.69□□□□□ -0.38
VPS45-204ENST00000460366 TBC1D9BQ66K14 1250 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
VPS45-204ENST00000460366 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 SETDB2Q96T68 719 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 ZBTB3Q9H5J0 574 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 PARP3Q9Y6F1 533 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
VPS45-204ENST00000460366 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
VPS45-204ENST00000460366 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
VPS45-204ENST00000460366 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
VPS45-204ENST00000460366 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
VPS45-204ENST00000460366 G2E3Q7L622 706 aa12.68□□□□□ -0.38
VPS45-204ENST00000460366 ZNF34Q8IZ26 560 aa12.68□□□□□ -0.38
VPS45-204ENST00000460366 ATP10DQ9P241 1426 aa12.68□□□□□ -0.38
VPS45-204ENST00000460366 DDR1Q08345 913 aa12.67□□□□□ -0.38
VPS45-204ENST00000460366 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
VPS45-204ENST00000460366 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
VPS45-204ENST00000460366 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
VPS45-204ENST00000460366 FBXO22Q8NEZ5 403 aa12.67□□□□□ -0.38
VPS45-204ENST00000460366 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
VPS45-204ENST00000460366 PI4KAP2A4QPH2 592 aa12.66□□□□□ -0.38
VPS45-204ENST00000460366 SERPINB2P05120 415 aa12.66□□□□□ -0.38
VPS45-204ENST00000460366 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
VPS45-204ENST00000460366 PI4KAP1Q8N8J0 262 aa12.66□□□□□ -0.38
VPS45-204ENST00000460366 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
VPS45-204ENST00000460366 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
VPS45-204ENST00000460366 METTL22Q9BUU2 404 aaPredicted RBP12.66□□□□□ -0.38
VPS45-204ENST00000460366 SMC4Q9NTJ3 1288 aa12.66□□□□□ -0.38
VPS45-204ENST00000460366 NIP7Q9Y221 180 aaKnown RBP eCLIP12.66□□□□□ -0.38
VPS45-204ENST00000460366 SCN7AQ01118 1682 aa12.66□□□□□ -0.38
VPS45-204ENST00000460366 CARMIL3Q8ND23 1372 aa12.66□□□□□ -0.38
VPS45-204ENST00000460366 PTPRCP08575 1304 aa12.65□□□□□ -0.38
VPS45-204ENST00000460366 BICDL1Q6ZP65 573 aa12.65□□□□□ -0.38
VPS45-204ENST00000460366 ARHGAP45Q92619 1136 aa12.65□□□□□ -0.38
VPS45-204ENST00000460366 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
VPS45-204ENST00000460366 PPP1R1BQ9UD71 204 aaPredicted RBP12.65□□□□□ -0.38
VPS45-204ENST00000460366 MAP3K2Q9Y2U5 619 aa12.65□□□□□ -0.38
VPS45-204ENST00000460366 CD2APQ9Y5K6 639 aa12.65□□□□□ -0.38
VPS45-204ENST00000460366 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
VPS45-204ENST00000460366 LRP5O75197 1615 aa12.65□□□□□ -0.38
VPS45-204ENST00000460366 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
VPS45-204ENST00000460366 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
VPS45-204ENST00000460366 DNAAF4Q8WXU2 420 aa12.64□□□□□ -0.39
VPS45-204ENST00000460366 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
VPS45-204ENST00000460366 ADCY9O60503 1353 aa12.64□□□□□ -0.39
VPS45-204ENST00000460366 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
VPS45-204ENST00000460366 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
VPS45-204ENST00000460366 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
VPS45-204ENST00000460366 IPO8O15397 1037 aaKnown RBP12.63□□□□□ -0.39
VPS45-204ENST00000460366 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
VPS45-204ENST00000460366 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms