RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 GPTP24298 496 aa19.26■□□□□ 0.67
ATG4B-213ENST00000460211 PARP10Q53GL7 1025 aa19.26■□□□□ 0.67
ATG4B-213ENST00000460211 PPP1R42Q7Z4L9 355 aa19.26■□□□□ 0.67
ATG4B-213ENST00000460211 TNS4Q8IZW8 715 aa19.26■□□□□ 0.67
ATG4B-213ENST00000460211 ANKRD31Q8N7Z5 1873 aa19.25■□□□□ 0.67
ATG4B-213ENST00000460211 GOLGA2Q08379 1002 aa19.25■□□□□ 0.67
ATG4B-213ENST00000460211 ANKRD13DQ6ZTN6 518 aa19.25■□□□□ 0.67
ATG4B-213ENST00000460211 ZNF34Q8IZ26 560 aa19.25■□□□□ 0.67
ATG4B-213ENST00000460211 ZNF622Q969S3 477 aaKnown RBP eCLIP19.25■□□□□ 0.67
ATG4B-213ENST00000460211 MYH16Q9H6N6 1097 aa19.25■□□□□ 0.67
ATG4B-213ENST00000460211 TWISTNBQ3B726 338 aaPredicted RBP19.24■□□□□ 0.67
ATG4B-213ENST00000460211 PLBD2Q8NHP8 589 aa19.24■□□□□ 0.67
ATG4B-213ENST00000460211 STK31Q9BXU1 1019 aa19.24■□□□□ 0.67
ATG4B-213ENST00000460211 COL11A2P13942 1736 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-213ENST00000460211 TCIRG1Q13488 830 aa19.23■□□□□ 0.67
ATG4B-213ENST00000460211 TSPYL6Q8N831 410 aa19.23■□□□□ 0.67
ATG4B-213ENST00000460211 CNKSR1Q969H4 720 aa19.23■□□□□ 0.67
ATG4B-213ENST00000460211 POTECB2RU33 542 aa19.22■□□□□ 0.67
ATG4B-213ENST00000460211 C21orf2O43822 256 aa19.22■□□□□ 0.67
ATG4B-213ENST00000460211 SUSD4Q5VX71 490 aa19.22■□□□□ 0.67
ATG4B-213ENST00000460211 STYK1Q6J9G0 422 aa19.22■□□□□ 0.67
ATG4B-213ENST00000460211 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
ATG4B-213ENST00000460211 UTP14AQ9BVJ6 771 aaKnown RBP19.22■□□□□ 0.67
ATG4B-213ENST00000460211 CACNA1SQ13698 1873 aa19.22■□□□□ 0.67
ATG4B-213ENST00000460211 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
ATG4B-213ENST00000460211 IBTKQ9P2D0 1353 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-213ENST00000460211 DDX58O95786 925 aaKnown RBP19.21■□□□□ 0.67
ATG4B-213ENST00000460211 HSPA1AP0DMV8 641 aaKnown RBP19.21■□□□□ 0.67
ATG4B-213ENST00000460211 HSPA1BP0DMV9 641 aaKnown RBP19.21■□□□□ 0.67
ATG4B-213ENST00000460211 SRGNP10124 158 aa19.21■□□□□ 0.67
ATG4B-213ENST00000460211 RIC3Q7Z5B4 369 aa19.21■□□□□ 0.67
ATG4B-213ENST00000460211 UBN2Q6ZU65 1347 aa19.21■□□□□ 0.67
ATG4B-213ENST00000460211 NPR1P16066 1061 aa19.2■□□□□ 0.66
ATG4B-213ENST00000460211 ERFEQ4G0M1 354 aa19.2■□□□□ 0.66
ATG4B-213ENST00000460211 DPY19L2Q6NUT2 758 aa19.2■□□□□ 0.66
ATG4B-213ENST00000460211 NUTM1Q86Y26 1132 aa19.2■□□□□ 0.66
ATG4B-213ENST00000460211 FER1L6Q2WGJ9 1857 aa19.2■□□□□ 0.66
ATG4B-213ENST00000460211 DICER1Q9UPY3 1922 aaKnown RBP19.19■□□□□ 0.66
ATG4B-213ENST00000460211 KLRG2A4D1S0 409 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-213ENST00000460211 RNF123Q5XPI4 1314 aa19.19■□□□□ 0.66
ATG4B-213ENST00000460211 NUP98P52948 1817 aa19.18■□□□□ 0.66
ATG4B-213ENST00000460211 PHAXQ9H814 394 aaKnown RBP19.18■□□□□ 0.66
ATG4B-213ENST00000460211 NTSR2O95665 410 aa19.17■□□□□ 0.66
ATG4B-213ENST00000460211 EXOSC9Q06265 439 aaKnown RBP19.17■□□□□ 0.66
ATG4B-213ENST00000460211 NLRP10Q86W26 655 aa19.17■□□□□ 0.66
ATG4B-213ENST00000460211 TRMT112Q9UI30 125 aaKnown RBP19.17■□□□□ 0.66
ATG4B-213ENST00000460211 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
ATG4B-213ENST00000460211 ALDH1B1P30837 517 aa19.16■□□□□ 0.66
ATG4B-213ENST00000460211 SOGA3Q5TF21 947 aa19.16■□□□□ 0.66
ATG4B-213ENST00000460211 MIER1Q8N108 512 aa19.16■□□□□ 0.66
ATG4B-213ENST00000460211 RPGRQ92834 1020 aaKnown RBP19.16■□□□□ 0.66
ATG4B-213ENST00000460211 NLRP3Q96P20 1036 aa19.16■□□□□ 0.66
ATG4B-213ENST00000460211 SLX4Q8IY92 1834 aa19.16■□□□□ 0.66
ATG4B-213ENST00000460211 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
ATG4B-213ENST00000460211 VAMP4O75379 141 aa19.15■□□□□ 0.66
ATG4B-213ENST00000460211 POTEIP0CG38 1075 aa19.15■□□□□ 0.66
ATG4B-213ENST00000460211 POTEJP0CG39 1038 aa19.15■□□□□ 0.66
ATG4B-213ENST00000460211 SLC10A5Q5PT55 438 aa19.15■□□□□ 0.66
ATG4B-213ENST00000460211 ISCA1Q9BUE6 129 aa19.15■□□□□ 0.66
ATG4B-213ENST00000460211 TAOK3Q9H2K8 898 aa19.15■□□□□ 0.66
ATG4B-213ENST00000460211 SPINK5Q9NQ38 1064 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-213ENST00000460211 SH3TC1Q8TE82 1336 aa19.15■□□□□ 0.66
ATG4B-213ENST00000460211 ZNF521Q96K83 1311 aa19.15■□□□□ 0.66
ATG4B-213ENST00000460211 E9PSI1 815 aa19.14■□□□□ 0.65
ATG4B-213ENST00000460211 ATP5J2-PTCD1G3V325 749 aa19.14■□□□□ 0.65
ATG4B-213ENST00000460211 DDNO94850 711 aaPredicted RBP19.14■□□□□ 0.65
ATG4B-213ENST00000460211 TRIM28Q13263 835 aaKnown RBP19.14■□□□□ 0.65
ATG4B-213ENST00000460211 CRY2Q49AN0 593 aa19.14■□□□□ 0.65
ATG4B-213ENST00000460211 PRPF40BQ6NWY9 871 aaKnown RBP19.14■□□□□ 0.65
ATG4B-213ENST00000460211 MKRN1Q9UHC7 482 aaKnown RBP19.14■□□□□ 0.65
ATG4B-213ENST00000460211 ABCC12Q96J65 1359 aa19.14■□□□□ 0.65
ATG4B-213ENST00000460211 CHADLQ6NUI6 762 aa19.13■□□□□ 0.65
ATG4B-213ENST00000460211 KSR2Q6VAB6 950 aa19.13■□□□□ 0.65
ATG4B-213ENST00000460211 RBM17Q96I25 401 aaKnown RBP19.13■□□□□ 0.65
ATG4B-213ENST00000460211 RIC1Q4ADV7 1423 aa19.13■□□□□ 0.65
ATG4B-213ENST00000460211 MYD88Q99836 296 aa19.12■□□□□ 0.65
ATG4B-213ENST00000460211 METTL22Q9BUU2 404 aaPredicted RBP19.12■□□□□ 0.65
ATG4B-213ENST00000460211 LTBP3Q9NS15 1303 aa19.11■□□□□ 0.65
ATG4B-213ENST00000460211 PI4KAP2A4QPH2 592 aa19.11■□□□□ 0.65
ATG4B-213ENST00000460211 HSP90B1P14625 803 aaKnown RBP19.11■□□□□ 0.65
ATG4B-213ENST00000460211 NEXNQ0ZGT2 675 aa19.11■□□□□ 0.65
ATG4B-213ENST00000460211 PI4KAP1Q8N8J0 262 aa19.11■□□□□ 0.65
ATG4B-213ENST00000460211 MAP3K2Q9Y2U5 619 aa19.11■□□□□ 0.65
ATG4B-213ENST00000460211 ARFGEF2Q9Y6D5 1785 aa19.11■□□□□ 0.65
ATG4B-213ENST00000460211 HOXA10P31260 410 aaPredicted RBP19.1■□□□□ 0.65
ATG4B-213ENST00000460211 CCDC191Q8NCU4 936 aa19.1■□□□□ 0.65
ATG4B-213ENST00000460211 CREBZFQ9NS37 354 aa19.1■□□□□ 0.65
ATG4B-213ENST00000460211 HCLS1P14317 486 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-213ENST00000460211 FLIIQ13045 1269 aa19.09■□□□□ 0.65
ATG4B-213ENST00000460211 CCDC93Q567U6 631 aa19.09■□□□□ 0.65
ATG4B-213ENST00000460211 CRAMP1Q96RY5 1269 aa19.09■□□□□ 0.65
ATG4B-213ENST00000460211 TMX4Q9H1E5 349 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-213ENST00000460211 CWC25Q9NXE8 425 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-213ENST00000460211 SLFN5Q08AF3 891 aa19.08■□□□□ 0.64
ATG4B-213ENST00000460211 FKBP5Q13451 457 aaPredicted RBP19.08■□□□□ 0.64
ATG4B-213ENST00000460211 G2E3Q7L622 706 aa19.08■□□□□ 0.64
ATG4B-213ENST00000460211 ZBTB38Q8NAP3 1195 aaPredicted RBP19.08■□□□□ 0.64
ATG4B-213ENST00000460211 FAM89AQ96GI7 184 aa19.08■□□□□ 0.64
ATG4B-213ENST00000460211 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
ATG4B-213ENST00000460211 RTKN2Q8IZC4 609 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms