RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 LAMB2P55268 1798 aa17.54■□□□□ 0.4
SRRT-206ENST00000460194 PNMA8AQ86V59 439 aaPredicted RBP17.54■□□□□ 0.4
SRRT-206ENST00000460194 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
SRRT-206ENST00000460194 NTSR2O95665 410 aa17.53■□□□□ 0.4
SRRT-206ENST00000460194 PDIA6Q15084 440 aa17.53■□□□□ 0.4
SRRT-206ENST00000460194 NFE2L2Q16236 605 aa17.53■□□□□ 0.4
SRRT-206ENST00000460194 CC2D2BQ6DHV5 1058 aa17.53■□□□□ 0.4
SRRT-206ENST00000460194 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
SRRT-206ENST00000460194 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
SRRT-206ENST00000460194 NGEFQ8N5V2 710 aa17.53■□□□□ 0.4
SRRT-206ENST00000460194 WBP1LQ9NX94 342 aa17.53■□□□□ 0.4
SRRT-206ENST00000460194 TRPM7Q96QT4 1865 aa17.52■□□□□ 0.4
SRRT-206ENST00000460194 THSD7BQ9C0I4 1608 aa17.52■□□□□ 0.4
SRRT-206ENST00000460194 RASSF10A6NK89 507 aa17.52■□□□□ 0.4
SRRT-206ENST00000460194 EAPPQ56P03 285 aaPredicted RBP17.52■□□□□ 0.4
SRRT-206ENST00000460194 MAP1SQ66K74 1059 aaPredicted RBP17.52■□□□□ 0.4
SRRT-206ENST00000460194 GIGYF2Q6Y7W6 1299 aaKnown RBP17.52■□□□□ 0.4
SRRT-206ENST00000460194 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
SRRT-206ENST00000460194 PRDM10Q9NQV6 1147 aa17.52■□□□□ 0.4
SRRT-206ENST00000460194 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.4
SRRT-206ENST00000460194 ANKRD36CQ5JPF3 1778 aa17.52■□□□□ 0.4
SRRT-206ENST00000460194 GPTP24298 496 aa17.51■□□□□ 0.39
SRRT-206ENST00000460194 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
SRRT-206ENST00000460194 SCNN1DP51172 638 aa17.51■□□□□ 0.39
SRRT-206ENST00000460194 ZBTB3Q9H5J0 574 aa17.51■□□□□ 0.39
SRRT-206ENST00000460194 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
SRRT-206ENST00000460194 MYL6BP14649 208 aa17.5■□□□□ 0.39
SRRT-206ENST00000460194 SLC10A5Q5PT55 438 aa17.5■□□□□ 0.39
SRRT-206ENST00000460194 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
SRRT-206ENST00000460194 KIF6Q6ZMV9 814 aa17.49■□□□□ 0.39
SRRT-206ENST00000460194 JDP2Q8WYK2 163 aa17.49■□□□□ 0.39
SRRT-206ENST00000460194 TAF1P21675 1872 aa17.49■□□□□ 0.39
SRRT-206ENST00000460194 EPS15P42566 896 aa17.48■□□□□ 0.39
SRRT-206ENST00000460194 FMR1Q06787 632 aaKnown RBP eCLIP17.48■□□□□ 0.39
SRRT-206ENST00000460194 RPGRQ92834 1020 aaKnown RBP17.48■□□□□ 0.39
SRRT-206ENST00000460194 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
SRRT-206ENST00000460194 PROSER3Q2NL68 480 aa17.47■□□□□ 0.39
SRRT-206ENST00000460194 DEFB115Q30KQ5 88 aa17.47■□□□□ 0.39
SRRT-206ENST00000460194 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
SRRT-206ENST00000460194 PPEF1O14829 653 aaPredicted RBP17.46■□□□□ 0.39
SRRT-206ENST00000460194 CTCFP49711 727 aaPredicted RBP17.46■□□□□ 0.39
SRRT-206ENST00000460194 RBM17Q96I25 401 aaKnown RBP17.46■□□□□ 0.39
SRRT-206ENST00000460194 RTFDC1Q9BY42 306 aaPredicted RBP17.46■□□□□ 0.39
SRRT-206ENST00000460194 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
SRRT-206ENST00000460194 PARP10Q53GL7 1025 aa17.45■□□□□ 0.38
SRRT-206ENST00000460194 CST9Q5W186 159 aa17.45■□□□□ 0.38
SRRT-206ENST00000460194 LARGE2Q8N3Y3 721 aa17.45■□□□□ 0.38
SRRT-206ENST00000460194 VPS33BQ9H267 617 aa17.45■□□□□ 0.38
SRRT-206ENST00000460194 ATP6V0A2Q9Y487 856 aa17.45■□□□□ 0.38
SRRT-206ENST00000460194 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
SRRT-206ENST00000460194 WDR33Q9C0J8 1336 aaKnown RBP17.45■□□□□ 0.38
SRRT-206ENST00000460194 PPP1R42Q7Z4L9 355 aa17.44■□□□□ 0.38
SRRT-206ENST00000460194 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
SRRT-206ENST00000460194 ABCC4O15439 1325 aa17.44■□□□□ 0.38
SRRT-206ENST00000460194 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
SRRT-206ENST00000460194 ANXA1P04083 346 aa17.43■□□□□ 0.38
SRRT-206ENST00000460194 NEFMP07197 916 aa17.43■□□□□ 0.38
SRRT-206ENST00000460194 HSPA8P11142 646 aaKnown RBP17.43■□□□□ 0.38
SRRT-206ENST00000460194 LBX1P52954 281 aa17.43■□□□□ 0.38
SRRT-206ENST00000460194 USP50Q70EL3 339 aaPredicted RBP17.43■□□□□ 0.38
SRRT-206ENST00000460194 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
SRRT-206ENST00000460194 DUOX1Q9NRD9 1551 aa17.43■□□□□ 0.38
SRRT-206ENST00000460194 DDX60Q8IY21 1712 aaKnown RBP17.43■□□□□ 0.38
SRRT-206ENST00000460194 TCERG1O14776 1098 aaKnown RBP17.42■□□□□ 0.38
SRRT-206ENST00000460194 CXCL9Q07325 125 aa17.42■□□□□ 0.38
SRRT-206ENST00000460194 AOC3Q16853 763 aa17.42■□□□□ 0.38
SRRT-206ENST00000460194 UTP14AQ9BVJ6 771 aaKnown RBP17.42■□□□□ 0.38
SRRT-206ENST00000460194 GPRC5DQ9NZD1 345 aa17.42■□□□□ 0.38
SRRT-206ENST00000460194 TSPYL4Q9UJ04 414 aa17.42■□□□□ 0.38
SRRT-206ENST00000460194 TRAF5O00463 557 aa17.41■□□□□ 0.38
SRRT-206ENST00000460194 PNNQ9H307 717 aaKnown RBP17.41■□□□□ 0.38
SRRT-206ENST00000460194 PGAP2Q9UHJ9 254 aa17.41■□□□□ 0.38
SRRT-206ENST00000460194 COL4A1P02462 1669 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 EIF2S2P20042 333 aaKnown RBP17.4■□□□□ 0.38
SRRT-206ENST00000460194 LMOD1P29536 600 aaPredicted RBP17.4■□□□□ 0.38
SRRT-206ENST00000460194 TMPOP42166 694 aaKnown RBP17.4■□□□□ 0.38
SRRT-206ENST00000460194 RIPK4P57078 832 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 MAP2K1Q02750 393 aaPredicted RBP17.4■□□□□ 0.38
SRRT-206ENST00000460194 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 SP8Q8IXZ3 490 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 AIDAQ96BJ3 306 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 ZNRF3Q9ULT6 936 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
SRRT-206ENST00000460194 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
SRRT-206ENST00000460194 BBOX1O75936 387 aa17.39■□□□□ 0.37
SRRT-206ENST00000460194 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
SRRT-206ENST00000460194 ADARB2Q9NS39 739 aaKnown RBP17.39■□□□□ 0.37
SRRT-206ENST00000460194 TLL2Q9Y6L7 1015 aa17.39■□□□□ 0.37
SRRT-206ENST00000460194 POLR2AP24928 1970 aaKnown RBP17.39■□□□□ 0.37
SRRT-206ENST00000460194 HIRAP54198 1017 aaPredicted RBP17.38■□□□□ 0.37
SRRT-206ENST00000460194 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
SRRT-206ENST00000460194 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
SRRT-206ENST00000460194 XAGE3Q8WTP9 111 aa17.38■□□□□ 0.37
SRRT-206ENST00000460194 CAPNS2Q96L46 248 aa17.38■□□□□ 0.37
SRRT-206ENST00000460194 CHL1O00533 1208 aa17.37■□□□□ 0.37
SRRT-206ENST00000460194 HCLS1P14317 486 aaPredicted RBP17.37■□□□□ 0.37
SRRT-206ENST00000460194 KRT24Q2M2I5 525 aa17.37■□□□□ 0.37
SRRT-206ENST00000460194 CYP4F22Q6NT55 531 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms