RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 TTC41PQ6P2S7 1318 aa23.36■■□□□ 1.33
CNEP1R1-203ENST00000458059 VPS53Q5VIR6 699 aa23.36■■□□□ 1.33
CNEP1R1-203ENST00000458059 DDX11Q96FC9 970 aa23.35■■□□□ 1.33
CNEP1R1-203ENST00000458059 ZSWIM6Q9HCJ5 1215 aa23.35■■□□□ 1.33
CNEP1R1-203ENST00000458059 ZNF589Q86UQ0 364 aaPredicted RBP23.35■■□□□ 1.33
CNEP1R1-203ENST00000458059 CEMIPQ8WUJ3 1361 aa23.35■■□□□ 1.33
CNEP1R1-203ENST00000458059 CEBPZQ03701 1054 aaKnown RBP23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 NECTIN1Q15223 517 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 IL17RAQ96F46 866 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 LRRC2Q9BYS8 371 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 PXDNLA1KZ92 1463 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 LUZP1Q86V48 1076 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 EVI5LQ96CN4 794 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 KAZALD1Q96I82 304 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 PYCARDQ9ULZ3 195 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 LRRC37A3O60309 1634 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 SLC27A2O14975 620 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 GIGYF1O75420 1035 aaPredicted RBP23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 KSR2Q6VAB6 950 aa23.34■■□□□ 1.33
CNEP1R1-203ENST00000458059 RNMTO43148 476 aaKnown RBP23.33■■□□□ 1.32
CNEP1R1-203ENST00000458059 TERF1P54274 439 aa23.33■■□□□ 1.32
CNEP1R1-203ENST00000458059 PLEKHO1Q53GL0 409 aaPredicted RBP23.33■■□□□ 1.32
CNEP1R1-203ENST00000458059 RIC3Q7Z5B4 369 aa23.33■■□□□ 1.32
CNEP1R1-203ENST00000458059 THEMISQ8N1K5 641 aaPredicted RBP23.33■■□□□ 1.32
CNEP1R1-203ENST00000458059 PIBF1Q8WXW3 757 aa23.33■■□□□ 1.32
CNEP1R1-203ENST00000458059 CCDC129Q6ZRS4 1044 aa23.32■■□□□ 1.32
CNEP1R1-203ENST00000458059 GOLGA6L4A6NEF3 574 aa23.32■■□□□ 1.32
CNEP1R1-203ENST00000458059 GRM8O00222 908 aa23.32■■□□□ 1.32
CNEP1R1-203ENST00000458059 AKAP4Q5JQC9 854 aa23.32■■□□□ 1.32
CNEP1R1-203ENST00000458059 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
CNEP1R1-203ENST00000458059 BLOC1S2Q6QNY1 142 aa23.32■■□□□ 1.32
CNEP1R1-203ENST00000458059 BABAM1Q9NWV8 329 aa23.32■■□□□ 1.32
CNEP1R1-203ENST00000458059 CACNA1FO60840 1977 aa23.32■■□□□ 1.32
CNEP1R1-203ENST00000458059 DYNC1I1O14576 645 aa23.31■■□□□ 1.32
CNEP1R1-203ENST00000458059 UVSSAQ2YD98 709 aa23.31■■□□□ 1.32
CNEP1R1-203ENST00000458059 JAK2O60674 1132 aa23.31■■□□□ 1.32
CNEP1R1-203ENST00000458059 DACT1Q9NYF0 836 aa23.3■■□□□ 1.32
CNEP1R1-203ENST00000458059 SLFNL1Q499Z3 407 aa23.3■■□□□ 1.32
CNEP1R1-203ENST00000458059 EPHA10Q5JZY3 1008 aa23.3■■□□□ 1.32
CNEP1R1-203ENST00000458059 SEC62Q99442 399 aaKnown RBP23.3■■□□□ 1.32
CNEP1R1-203ENST00000458059 DNAJC2Q99543 621 aaKnown RBP23.3■■□□□ 1.32
CNEP1R1-203ENST00000458059 FUCA2Q9BTY2 467 aa23.3■■□□□ 1.32
CNEP1R1-203ENST00000458059 KCNF1Q9H3M0 494 aa23.3■■□□□ 1.32
CNEP1R1-203ENST00000458059 PXDNQ92626 1479 aa23.29■■□□□ 1.32
CNEP1R1-203ENST00000458059 KRT85P78386 507 aa23.29■■□□□ 1.32
CNEP1R1-203ENST00000458059 DRC7Q8IY82 874 aa23.29■■□□□ 1.32
CNEP1R1-203ENST00000458059 SH2B1Q9NRF2 756 aaPredicted RBP23.29■■□□□ 1.32
CNEP1R1-203ENST00000458059 ZSCAN31Q96LW9 406 aaPredicted RBP23.29■■□□□ 1.32
CNEP1R1-203ENST00000458059 ORAI2Q96SN7 254 aa23.29■■□□□ 1.32
CNEP1R1-203ENST00000458059 LETM1O95202 739 aaPredicted RBP23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 HSP90B1P14625 803 aaKnown RBP23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 NAP1L2Q9ULW6 460 aaPredicted RBP23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 PTGS1P23219 599 aa23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 NUP62CLQ9H1M0 184 aa23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 EPB41L2O43491 1005 aaKnown RBP23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 CCDC192P0DO97 292 aa23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 MAP4K1Q92918 833 aa23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 MYD88Q99836 296 aa23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 TAOK2Q9UL54 1235 aa23.28■■□□□ 1.32
CNEP1R1-203ENST00000458059 A0A087WWV3 80 aa23.27■■□□□ 1.32
CNEP1R1-203ENST00000458059 ERC1Q8IUD2 1116 aa23.27■■□□□ 1.32
CNEP1R1-203ENST00000458059 ZC3H6P61129 1189 aaKnown RBP23.27■■□□□ 1.32
CNEP1R1-203ENST00000458059 ANKRD24Q8TF21 1146 aa23.27■■□□□ 1.32
CNEP1R1-203ENST00000458059 FBXW7Q969H0 707 aa23.27■■□□□ 1.32
CNEP1R1-203ENST00000458059 SPATA32Q96LK8 384 aa23.27■■□□□ 1.32
CNEP1R1-203ENST00000458059 AXIN2Q9Y2T1 843 aa23.27■■□□□ 1.32
CNEP1R1-203ENST00000458059 RGPD2P0DJD1 1756 aa23.26■■□□□ 1.31
CNEP1R1-203ENST00000458059 BICD2Q8TD16 824 aa23.26■■□□□ 1.31
CNEP1R1-203ENST00000458059 USP42Q9H9J4 1324 aaKnown RBP23.26■■□□□ 1.31
CNEP1R1-203ENST00000458059 IGKV5-2P06315 115 aa23.26■■□□□ 1.31
CNEP1R1-203ENST00000458059 MYRIPQ8NFW9 859 aa23.26■■□□□ 1.31
CNEP1R1-203ENST00000458059 TNMDQ9H2S6 317 aa23.26■■□□□ 1.31
CNEP1R1-203ENST00000458059 LRMPQ12912 555 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 MTX1Q13505 466 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 MAP3K11Q16584 847 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 ANO6Q4KMQ2 910 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 NRBP1Q9UHY1 535 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 ATP5J2-PTCD1G3V325 749 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 PTCD1O75127 700 aaKnown RBP23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 ALDH1L1O75891 902 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 FGD1P98174 961 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 TYRO3Q06418 890 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 LINS1Q8NG48 757 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 GCP02774 474 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 HOXB7P09629 217 aa23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 TOB2Q14106 344 aaPredicted RBP23.25■■□□□ 1.31
CNEP1R1-203ENST00000458059 XAGE3Q8WTP9 111 aa23.24■■□□□ 1.31
CNEP1R1-203ENST00000458059 COPS6Q7L5N1 327 aa23.24■■□□□ 1.31
CNEP1R1-203ENST00000458059 TM6SF1Q9BZW5 370 aa23.24■■□□□ 1.31
CNEP1R1-203ENST00000458059 MRVI1Q9Y6F6 885 aa23.24■■□□□ 1.31
CNEP1R1-203ENST00000458059 DDX46Q7L014 1031 aaKnown RBP23.23■■□□□ 1.31
CNEP1R1-203ENST00000458059 LTN1O94822 1766 aa23.23■■□□□ 1.31
CNEP1R1-203ENST00000458059 RPS6KB1P23443 525 aa23.23■■□□□ 1.31
CNEP1R1-203ENST00000458059 PSMA5P28066 241 aa23.23■■□□□ 1.31
CNEP1R1-203ENST00000458059 FTOQ9C0B1 505 aaKnown RBP eCLIP23.23■■□□□ 1.31
CNEP1R1-203ENST00000458059 NR1I2O75469 434 aa23.22■■□□□ 1.31
CNEP1R1-203ENST00000458059 ZNF710Q8N1W2 664 aa23.22■■□□□ 1.31
CNEP1R1-203ENST00000458059 RNF20Q5VTR2 975 aa23.22■■□□□ 1.31
CNEP1R1-203ENST00000458059 DDX58O95786 925 aaKnown RBP23.21■■□□□ 1.31
CNEP1R1-203ENST00000458059 TFCP2Q12800 502 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms