RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
PKP4-207ENST00000457109 RUNDC1Q96C34 613 aa11.5□□□□□ -0.57
PKP4-207ENST00000457109 FZD9O00144 591 aa11.49□□□□□ -0.57
PKP4-207ENST00000457109 BBOX1O75936 387 aa11.49□□□□□ -0.57
PKP4-207ENST00000457109 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
PKP4-207ENST00000457109 COPS6Q7L5N1 327 aa11.49□□□□□ -0.57
PKP4-207ENST00000457109 NIM1KQ8IY84 436 aa11.49□□□□□ -0.57
PKP4-207ENST00000457109 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
PKP4-207ENST00000457109 SCN7AQ01118 1682 aa11.49□□□□□ -0.57
PKP4-207ENST00000457109 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
PKP4-207ENST00000457109 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
PKP4-207ENST00000457109 NTSR2O95665 410 aa11.48□□□□□ -0.57
PKP4-207ENST00000457109 TNS4Q8IZW8 715 aa11.48□□□□□ -0.57
PKP4-207ENST00000457109 XAGE3Q8WTP9 111 aa11.48□□□□□ -0.57
PKP4-207ENST00000457109 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
PKP4-207ENST00000457109 VPS33BQ9H267 617 aa11.48□□□□□ -0.57
PKP4-207ENST00000457109 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
PKP4-207ENST00000457109 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
PKP4-207ENST00000457109 IBTKQ9P2D0 1353 aaPredicted RBP11.48□□□□□ -0.57
PKP4-207ENST00000457109 SIPA1L3O60292 1781 aaPredicted RBP11.47□□□□□ -0.57
PKP4-207ENST00000457109 UBN2Q6ZU65 1347 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 ZNF541Q9H0D2 1346 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 PPIP5K2O43314 1243 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 HSPA1AP0DMV8 641 aaKnown RBP11.47□□□□□ -0.57
PKP4-207ENST00000457109 HSPA1BP0DMV9 641 aaKnown RBP11.47□□□□□ -0.57
PKP4-207ENST00000457109 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
PKP4-207ENST00000457109 TCIRG1Q13488 830 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 SLC10A5Q5PT55 438 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 DDX21Q9NR30 783 aaKnown RBP eCLIP11.47□□□□□ -0.57
PKP4-207ENST00000457109 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
PKP4-207ENST00000457109 VIRMAQ69YN4 1812 aaKnown RBP11.46□□□□□ -0.57
PKP4-207ENST00000457109 ABCC12Q96J65 1359 aa11.46□□□□□ -0.57
PKP4-207ENST00000457109 CHL1O00533 1208 aa11.46□□□□□ -0.57
PKP4-207ENST00000457109 ANXA1P04083 346 aa11.46□□□□□ -0.57
PKP4-207ENST00000457109 HSP90B1P14625 803 aaKnown RBP11.46□□□□□ -0.57
PKP4-207ENST00000457109 PDIA6Q15084 440 aa11.46□□□□□ -0.57
PKP4-207ENST00000457109 COL13A1Q5TAT6 717 aaPredicted RBP11.46□□□□□ -0.57
PKP4-207ENST00000457109 DPP8Q6V1X1 898 aaPredicted RBP11.46□□□□□ -0.57
PKP4-207ENST00000457109 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
PKP4-207ENST00000457109 MPNDQ8N594 471 aa11.46□□□□□ -0.57
PKP4-207ENST00000457109 DBF4Q9UBU7 674 aaPredicted RBP11.46□□□□□ -0.57
PKP4-207ENST00000457109 SBF1O95248 1867 aa11.45□□□□□ -0.58
PKP4-207ENST00000457109 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
PKP4-207ENST00000457109 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
PKP4-207ENST00000457109 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
PKP4-207ENST00000457109 SP8Q8IXZ3 490 aa11.45□□□□□ -0.58
PKP4-207ENST00000457109 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
PKP4-207ENST00000457109 ABT1Q9ULW3 272 aaKnown RBP11.45□□□□□ -0.58
PKP4-207ENST00000457109 ADAMTS8Q9UP79 889 aa11.45□□□□□ -0.58
PKP4-207ENST00000457109 DLEC1Q9Y238 1755 aa11.45□□□□□ -0.58
PKP4-207ENST00000457109 HOXB7P09629 217 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 TNIP1Q15025 636 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 PROSER3Q2NL68 480 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 DEFB115Q30KQ5 88 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 MAP1SQ66K74 1059 aaPredicted RBP11.44□□□□□ -0.58
PKP4-207ENST00000457109 USP50Q70EL3 339 aaPredicted RBP11.44□□□□□ -0.58
PKP4-207ENST00000457109 TMC4Q7Z404 712 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 PLBD2Q8NHP8 589 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 ZNRF3Q9ULT6 936 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 SLX4Q8IY92 1834 aa11.44□□□□□ -0.58
PKP4-207ENST00000457109 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 PASKQ96RG2 1323 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 CAPN15O75808 1086 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
PKP4-207ENST00000457109 AOC3Q16853 763 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
PKP4-207ENST00000457109 RIC3Q7Z5B4 369 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 BCL2L13Q9BXK5 485 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
PKP4-207ENST00000457109 ABCC4O15439 1325 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 G3V3G9 751 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 EPS15P42566 896 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 GNAI1P63096 354 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 GRAPQ13588 217 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 DCAF8Q5TAQ9 597 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 DUSP27Q5VZP5 1158 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 GRAPLQ8TC17 118 aaPredicted RBP11.42□□□□□ -0.58
PKP4-207ENST00000457109 BEGAINQ9BUH8 593 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 ADARB2Q9NS39 739 aaKnown RBP11.42□□□□□ -0.58
PKP4-207ENST00000457109 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
PKP4-207ENST00000457109 BCORQ6W2J9 1755 aa11.41□□□□□ -0.58
PKP4-207ENST00000457109 H7C1D1 291 aa11.41□□□□□ -0.58
PKP4-207ENST00000457109 VEGFBP49765 207 aa11.41□□□□□ -0.58
PKP4-207ENST00000457109 CIAPIN1Q6FI81 312 aa11.41□□□□□ -0.58
PKP4-207ENST00000457109 CNTNAP1P78357 1384 aa11.41□□□□□ -0.58
PKP4-207ENST00000457109 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.58
PKP4-207ENST00000457109 TIAM2Q8IVF5 1701 aa11.4□□□□□ -0.58
PKP4-207ENST00000457109 FER1L6Q2WGJ9 1857 aa11.4□□□□□ -0.58
PKP4-207ENST00000457109 ATP5J2-PTCD1G3V325 749 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms