RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 RNF123Q5XPI4 1314 aa28.32■■■□□ 2.12
TMEM56-203ENST00000456991 EIF6P56537 245 aaKnown RBP28.31■■■□□ 2.12
TMEM56-203ENST00000456991 CNTROBQ8N137 903 aa28.31■■■□□ 2.12
TMEM56-203ENST00000456991 MAPK8IP3Q9UPT6 1336 aa28.31■■■□□ 2.12
TMEM56-203ENST00000456991 SCN4AP35499 1836 aa28.3■■■□□ 2.12
TMEM56-203ENST00000456991 IBTKQ9P2D0 1353 aaPredicted RBP28.3■■■□□ 2.12
TMEM56-203ENST00000456991 UBN2Q6ZU65 1347 aa28.3■■■□□ 2.12
TMEM56-203ENST00000456991 ZNF34Q8IZ26 560 aa28.3■■■□□ 2.12
TMEM56-203ENST00000456991 RBM17Q96I25 401 aaKnown RBP28.3■■■□□ 2.12
TMEM56-203ENST00000456991 CRAMP1Q96RY5 1269 aa28.3■■■□□ 2.12
TMEM56-203ENST00000456991 ERBB4Q15303 1308 aa28.29■■■□□ 2.12
TMEM56-203ENST00000456991 VEGFBP49765 207 aa28.29■■■□□ 2.12
TMEM56-203ENST00000456991 GIGYF2Q6Y7W6 1299 aaKnown RBP28.29■■■□□ 2.12
TMEM56-203ENST00000456991 SNED1Q8TER0 1413 aa28.28■■■□□ 2.12
TMEM56-203ENST00000456991 MAP1SQ66K74 1059 aaPredicted RBP28.28■■■□□ 2.12
TMEM56-203ENST00000456991 PPP1R42Q7Z4L9 355 aa28.28■■■□□ 2.12
TMEM56-203ENST00000456991 GJA3Q9Y6H8 435 aa28.28■■■□□ 2.12
TMEM56-203ENST00000456991 RIC1Q4ADV7 1423 aa28.27■■■□□ 2.12
TMEM56-203ENST00000456991 FOXN1O15353 648 aa28.27■■■□□ 2.12
TMEM56-203ENST00000456991 LARGE2Q8N3Y3 721 aa28.27■■■□□ 2.12
TMEM56-203ENST00000456991 AIDAQ96BJ3 306 aa28.27■■■□□ 2.12
TMEM56-203ENST00000456991 LMOD1P29536 600 aaPredicted RBP28.26■■■□□ 2.11
TMEM56-203ENST00000456991 PARP10Q53GL7 1025 aa28.26■■■□□ 2.11
TMEM56-203ENST00000456991 TSPYL4Q9UJ04 414 aa28.26■■■□□ 2.11
TMEM56-203ENST00000456991 PPEF1O14829 653 aaPredicted RBP28.25■■■□□ 2.11
TMEM56-203ENST00000456991 NTSR2O95665 410 aa28.25■■■□□ 2.11
TMEM56-203ENST00000456991 NLRP3Q96P20 1036 aa28.25■■■□□ 2.11
TMEM56-203ENST00000456991 TMX4Q9H1E5 349 aaPredicted RBP28.25■■■□□ 2.11
TMEM56-203ENST00000456991 PRDM10Q9NQV6 1147 aa28.25■■■□□ 2.11
TMEM56-203ENST00000456991 LAMB4A4D0S4 1761 aa28.24■■■□□ 2.11
TMEM56-203ENST00000456991 TCERG1O14776 1098 aaKnown RBP28.23■■■□□ 2.11
TMEM56-203ENST00000456991 CTCFP49711 727 aaPredicted RBP28.23■■■□□ 2.11
TMEM56-203ENST00000456991 DEFB115Q30KQ5 88 aa28.23■■■□□ 2.11
TMEM56-203ENST00000456991 RASSF10A6NK89 507 aa28.22■■■□□ 2.11
TMEM56-203ENST00000456991 EIF2S2P20042 333 aaKnown RBP28.22■■■□□ 2.11
TMEM56-203ENST00000456991 UTP14AQ9BVJ6 771 aaKnown RBP28.22■■■□□ 2.11
TMEM56-203ENST00000456991 SLC10A5Q5PT55 438 aa28.21■■■□□ 2.11
TMEM56-203ENST00000456991 C3orf67Q6ZVT6 689 aa28.21■■■□□ 2.11
TMEM56-203ENST00000456991 BABAM1Q9NWV8 329 aa28.21■■■□□ 2.11
TMEM56-203ENST00000456991 WBP1LQ9NX94 342 aa28.21■■■□□ 2.11
TMEM56-203ENST00000456991 KDM3BQ7LBC6 1761 aa28.2■■■□□ 2.11
TMEM56-203ENST00000456991 RIPK4P57078 832 aa28.2■■■□□ 2.1
TMEM56-203ENST00000456991 PDIA6Q15084 440 aa28.2■■■□□ 2.1
TMEM56-203ENST00000456991 LRP10Q7Z4F1 713 aa28.2■■■□□ 2.1
TMEM56-203ENST00000456991 NIM1KQ8IY84 436 aa28.2■■■□□ 2.1
TMEM56-203ENST00000456991 VPS33BQ9H267 617 aa28.2■■■□□ 2.1
TMEM56-203ENST00000456991 EPS15P42566 896 aa28.19■■■□□ 2.1
TMEM56-203ENST00000456991 SCNN1DP51172 638 aa28.19■■■□□ 2.1
TMEM56-203ENST00000456991 DDX21Q9NR30 783 aaKnown RBP eCLIP28.19■■■□□ 2.1
TMEM56-203ENST00000456991 ABT1Q9ULW3 272 aaKnown RBP28.19■■■□□ 2.1
TMEM56-203ENST00000456991 ATP6V0A2Q9Y487 856 aa28.19■■■□□ 2.1
TMEM56-203ENST00000456991 PPIP5K2O43314 1243 aa28.17■■■□□ 2.1
TMEM56-203ENST00000456991 USP50Q70EL3 339 aaPredicted RBP28.17■■■□□ 2.1
TMEM56-203ENST00000456991 ADAMTSL1Q8N6G6 1762 aa28.16■■■□□ 2.1
TMEM56-203ENST00000456991 LMOD3Q0VAK6 560 aa28.16■■■□□ 2.1
TMEM56-203ENST00000456991 SLC51AQ86UW1 340 aa28.16■■■□□ 2.1
TMEM56-203ENST00000456991 COL4A5P29400 1685 aa28.16■■■□□ 2.1
TMEM56-203ENST00000456991 WDR33Q9C0J8 1336 aaKnown RBP28.16■■■□□ 2.1
TMEM56-203ENST00000456991 NUP98P52948 1817 aa28.15■■■□□ 2.1
TMEM56-203ENST00000456991 BBOX1O75936 387 aa28.15■■■□□ 2.1
TMEM56-203ENST00000456991 PROSER3Q2NL68 480 aa28.15■■■□□ 2.1
TMEM56-203ENST00000456991 HSP90AB3PQ58FF7 597 aa28.15■■■□□ 2.1
TMEM56-203ENST00000456991 SUPT20HQ8NEM7 779 aa28.15■■■□□ 2.1
TMEM56-203ENST00000456991 ANXA1P04083 346 aa28.14■■■□□ 2.1
TMEM56-203ENST00000456991 MAP2K1Q02750 393 aaPredicted RBP28.14■■■□□ 2.1
TMEM56-203ENST00000456991 AOC3Q16853 763 aa28.14■■■□□ 2.1
TMEM56-203ENST00000456991 TMPOP42166 694 aaKnown RBP28.13■■■□□ 2.09
TMEM56-203ENST00000456991 LBX1P52954 281 aa28.13■■■□□ 2.09
TMEM56-203ENST00000456991 COPS6Q7L5N1 327 aa28.13■■■□□ 2.09
TMEM56-203ENST00000456991 ZNRF3Q9ULT6 936 aa28.13■■■□□ 2.09
TMEM56-203ENST00000456991 DLG5Q8TDM6 1919 aa28.13■■■□□ 2.09
TMEM56-203ENST00000456991 RALBP1Q15311 655 aa28.12■■■□□ 2.09
TMEM56-203ENST00000456991 RTFDC1Q9BY42 306 aaPredicted RBP28.12■■■□□ 2.09
TMEM56-203ENST00000456991 ABCC4O15439 1325 aa28.12■■■□□ 2.09
TMEM56-203ENST00000456991 AIMP1Q12904 312 aaKnown RBP28.11■■■□□ 2.09
TMEM56-203ENST00000456991 DPP8Q6V1X1 898 aaPredicted RBP28.11■■■□□ 2.09
TMEM56-203ENST00000456991 NLRP10Q86W26 655 aa28.11■■■□□ 2.09
TMEM56-203ENST00000456991 SP8Q8IXZ3 490 aa28.11■■■□□ 2.09
TMEM56-203ENST00000456991 ADARB2Q9NS39 739 aaKnown RBP28.11■■■□□ 2.09
TMEM56-203ENST00000456991 GPRC5DQ9NZD1 345 aa28.11■■■□□ 2.09
TMEM56-203ENST00000456991 CXCL9Q07325 125 aa28.1■■■□□ 2.09
TMEM56-203ENST00000456991 XAGE3Q8WTP9 111 aa28.1■■■□□ 2.09
TMEM56-203ENST00000456991 NECTIN2Q92692 538 aa28.1■■■□□ 2.09
TMEM56-203ENST00000456991 HCLS1P14317 486 aaPredicted RBP28.09■■■□□ 2.09
TMEM56-203ENST00000456991 ECE1P42892 770 aa28.09■■■□□ 2.09
TMEM56-203ENST00000456991 TCIRG1Q13488 830 aa28.09■■■□□ 2.09
TMEM56-203ENST00000456991 DDX46Q7L014 1031 aaKnown RBP28.09■■■□□ 2.09
TMEM56-203ENST00000456991 MPNDQ8N594 471 aa28.09■■■□□ 2.09
TMEM56-203ENST00000456991 TRMT112Q9UI30 125 aaKnown RBP28.09■■■□□ 2.09
TMEM56-203ENST00000456991 FMR1Q06787 632 aaKnown RBP eCLIP28.08■■■□□ 2.09
TMEM56-203ENST00000456991 TRAF5O00463 557 aa28.07■■■□□ 2.08
TMEM56-203ENST00000456991 CST9Q5W186 159 aa28.07■■■□□ 2.08
TMEM56-203ENST00000456991 PAXIP1Q6ZW49 1069 aaPredicted RBP28.07■■■□□ 2.08
TMEM56-203ENST00000456991 CAPNS2Q96L46 248 aa28.07■■■□□ 2.08
TMEM56-203ENST00000456991 HSPA8P11142 646 aaKnown RBP28.06■■■□□ 2.08
TMEM56-203ENST00000456991 SH3TC1Q8TE82 1336 aa28.06■■■□□ 2.08
TMEM56-203ENST00000456991 CHL1O00533 1208 aa28.05■■■□□ 2.08
TMEM56-203ENST00000456991 GMPSP49915 693 aaPredicted RBP28.05■■■□□ 2.08
TMEM56-203ENST00000456991 KIAA2012Q0VF49 1180 aa28.05■■■□□ 2.08
TMEM56-203ENST00000456991 GRAPQ13588 217 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms