RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 SURF6O75683 361 aaKnown RBP20.01■□□□□ 0.79
TMEM220-202ENST00000455996 PLEKHM2Q8IWE5 1019 aa20.01■□□□□ 0.79
TMEM220-202ENST00000455996 ZBTB38Q8NAP3 1195 aaPredicted RBP20.01■□□□□ 0.79
TMEM220-202ENST00000455996 CDHR2Q9BYE9 1310 aa20■□□□□ 0.79
TMEM220-202ENST00000455996 SALL3Q9BXA9 1300 aa19.99■□□□□ 0.79
TMEM220-202ENST00000455996 SMARCA5O60264 1052 aaPredicted RBP19.99■□□□□ 0.79
TMEM220-202ENST00000455996 RFX5P48382 616 aaPredicted RBP19.99■□□□□ 0.79
TMEM220-202ENST00000455996 SLC27A3Q5K4L6 730 aa19.99■□□□□ 0.79
TMEM220-202ENST00000455996 CLEC4GQ6UXB4 293 aa19.99■□□□□ 0.79
TMEM220-202ENST00000455996 JARID2Q92833 1246 aaPredicted RBP19.99■□□□□ 0.79
TMEM220-202ENST00000455996 KIF1BPQ96EK5 621 aa19.99■□□□□ 0.79
TMEM220-202ENST00000455996 ARXQ96QS3 562 aa19.99■□□□□ 0.79
TMEM220-202ENST00000455996 RBM19Q9Y4C8 960 aaKnown RBP19.99■□□□□ 0.79
TMEM220-202ENST00000455996 NUP98P52948 1817 aa19.98■□□□□ 0.79
TMEM220-202ENST00000455996 KCNQ4P56696 695 aa19.98■□□□□ 0.79
TMEM220-202ENST00000455996 BMP2KLQ5H9B9 411 aa19.98■□□□□ 0.79
TMEM220-202ENST00000455996 C16orf71Q8IYS4 520 aaPredicted RBP19.98■□□□□ 0.79
TMEM220-202ENST00000455996 RHPN1Q8TCX5 695 aa19.98■□□□□ 0.79
TMEM220-202ENST00000455996 OSBPL3Q9H4L5 887 aa19.98■□□□□ 0.79
TMEM220-202ENST00000455996 COPRSQ9NQ92 184 aa19.98■□□□□ 0.79
TMEM220-202ENST00000455996 TAF1LQ8IZX4 1826 aa19.98■□□□□ 0.79
TMEM220-202ENST00000455996 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
TMEM220-202ENST00000455996 ERC1Q8IUD2 1116 aa19.97■□□□□ 0.79
TMEM220-202ENST00000455996 UBN2Q6ZU65 1347 aa19.97■□□□□ 0.79
TMEM220-202ENST00000455996 APBB1O00213 710 aa19.96■□□□□ 0.79
TMEM220-202ENST00000455996 TRIM37O94972 964 aa19.96■□□□□ 0.79
TMEM220-202ENST00000455996 GPTP24298 496 aa19.96■□□□□ 0.79
TMEM220-202ENST00000455996 HMGB2P26583 209 aaKnown RBP19.96■□□□□ 0.79
TMEM220-202ENST00000455996 PARP10Q53GL7 1025 aa19.96■□□□□ 0.79
TMEM220-202ENST00000455996 POTEAQ6S8J7 498 aa19.96■□□□□ 0.79
TMEM220-202ENST00000455996 LMBR1LQ6UX01 489 aa19.95■□□□□ 0.78
TMEM220-202ENST00000455996 OTUD7AQ8TE49 926 aaPredicted RBP19.95■□□□□ 0.78
TMEM220-202ENST00000455996 LRRC4BQ9NT99 713 aa19.95■□□□□ 0.78
TMEM220-202ENST00000455996 STAP2Q9UGK3 403 aa19.95■□□□□ 0.78
TMEM220-202ENST00000455996 ZNF652Q9Y2D9 606 aa19.95■□□□□ 0.78
TMEM220-202ENST00000455996 C4BP0C0L5 1744 aa19.95■□□□□ 0.78
TMEM220-202ENST00000455996 CSF1RP07333 972 aa19.94■□□□□ 0.78
TMEM220-202ENST00000455996 PTPN12Q05209 780 aaKnown RBP19.94■□□□□ 0.78
TMEM220-202ENST00000455996 AK7Q96M32 723 aa19.94■□□□□ 0.78
TMEM220-202ENST00000455996 NARFQ9UHQ1 456 aa19.94■□□□□ 0.78
TMEM220-202ENST00000455996 PA2G4Q9UQ80 394 aaKnown RBP19.94■□□□□ 0.78
TMEM220-202ENST00000455996 SCN7AQ01118 1682 aa19.93■□□□□ 0.78
TMEM220-202ENST00000455996 FAM89AQ96GI7 184 aa19.93■□□□□ 0.78
TMEM220-202ENST00000455996 RTCBQ9Y3I0 505 aaKnown RBP19.93■□□□□ 0.78
TMEM220-202ENST00000455996 PLSCR1O15162 318 aa19.93■□□□□ 0.78
TMEM220-202ENST00000455996 GNPATO15228 680 aa19.93■□□□□ 0.78
TMEM220-202ENST00000455996 PDE1AP54750 535 aa19.93■□□□□ 0.78
TMEM220-202ENST00000455996 G3BP1Q13283 466 aaKnown RBP eCLIP19.93■□□□□ 0.78
TMEM220-202ENST00000455996 TTC22Q5TAA0 569 aa19.93■□□□□ 0.78
TMEM220-202ENST00000455996 AOX1Q06278 1338 aa19.92■□□□□ 0.78
TMEM220-202ENST00000455996 ADRA2BP18089 450 aa19.92■□□□□ 0.78
TMEM220-202ENST00000455996 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
TMEM220-202ENST00000455996 BCL2L12Q9HB09 334 aa19.92■□□□□ 0.78
TMEM220-202ENST00000455996 TRMT112Q9UI30 125 aaKnown RBP19.92■□□□□ 0.78
TMEM220-202ENST00000455996 SASH1O94885 1247 aa19.91■□□□□ 0.78
TMEM220-202ENST00000455996 SUSD4Q5VX71 490 aa19.91■□□□□ 0.78
TMEM220-202ENST00000455996 USP42Q9H9J4 1324 aaKnown RBP19.91■□□□□ 0.78
TMEM220-202ENST00000455996 GSPT1P15170 499 aaKnown RBP19.9■□□□□ 0.78
TMEM220-202ENST00000455996 MX1P20591 662 aa19.9■□□□□ 0.78
TMEM220-202ENST00000455996 OS9Q13438 667 aaPredicted RBP19.9■□□□□ 0.78
TMEM220-202ENST00000455996 UTP14AQ9BVJ6 771 aaKnown RBP19.9■□□□□ 0.78
TMEM220-202ENST00000455996 IL1RAPL2Q9NP60 686 aa19.9■□□□□ 0.78
TMEM220-202ENST00000455996 IRS4O14654 1257 aaPredicted RBP19.89■□□□□ 0.77
TMEM220-202ENST00000455996 NTSR2O95665 410 aa19.89■□□□□ 0.77
TMEM220-202ENST00000455996 AMIGO3Q86WK7 504 aa19.89■□□□□ 0.77
TMEM220-202ENST00000455996 SYNE4Q8N205 404 aa19.89■□□□□ 0.77
TMEM220-202ENST00000455996 PROM2Q8N271 834 aa19.89■□□□□ 0.77
TMEM220-202ENST00000455996 FBXO3Q9UK99 471 aa19.89■□□□□ 0.77
TMEM220-202ENST00000455996 NIP7Q9Y221 180 aaKnown RBP eCLIP19.89■□□□□ 0.77
TMEM220-202ENST00000455996 SH3TC1Q8TE82 1336 aa19.89■□□□□ 0.77
TMEM220-202ENST00000455996 PDE8AO60658 829 aa19.88■□□□□ 0.77
TMEM220-202ENST00000455996 CTSWP56202 376 aa19.88■□□□□ 0.77
TMEM220-202ENST00000455996 TXNRD1Q16881 649 aa19.88■□□□□ 0.77
TMEM220-202ENST00000455996 CLASRPQ8N2M8 674 aaKnown RBP19.88■□□□□ 0.77
TMEM220-202ENST00000455996 KLHDC4Q8TBB5 520 aa19.88■□□□□ 0.77
TMEM220-202ENST00000455996 ARHGEF1Q92888 912 aaKnown RBP19.88■□□□□ 0.77
TMEM220-202ENST00000455996 CIAO1O76071 339 aa19.87■□□□□ 0.77
TMEM220-202ENST00000455996 HSP90B1P14625 803 aaKnown RBP19.87■□□□□ 0.77
TMEM220-202ENST00000455996 TTLL11Q8NHH1 800 aa19.87■□□□□ 0.77
TMEM220-202ENST00000455996 ZPR1O75312 459 aa19.86■□□□□ 0.77
TMEM220-202ENST00000455996 TRAPPC3LQ5T215 181 aa19.86■□□□□ 0.77
TMEM220-202ENST00000455996 SSFA2P28290 1259 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 USPL1Q5W0Q7 1092 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 ATG9AQ7Z3C6 839 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 SIL1Q9H173 461 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 SRP68Q9UHB9 627 aaKnown RBP19.85■□□□□ 0.77
TMEM220-202ENST00000455996 CHMP3Q9Y3E7 222 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 UBR3Q6ZT12 1888 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 RTL9Q8NET4 1388 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 TTC41PQ6P2S7 1318 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 EYA2O00167 538 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 CCDC57Q2TAC2 916 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 SMIM5Q71RC9 77 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 NUTM1Q86Y26 1132 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 PIAS4Q8N2W9 510 aaPredicted RBP19.85■□□□□ 0.77
TMEM220-202ENST00000455996 GPR108Q9NPR9 543 aa19.85■□□□□ 0.77
TMEM220-202ENST00000455996 RGPD3A6NKT7 1758 aaPredicted RBP19.84■□□□□ 0.77
TMEM220-202ENST00000455996 RGPD4Q7Z3J3 1758 aa19.84■□□□□ 0.77
TMEM220-202ENST00000455996 C4AP0C0L4 1744 aa19.84■□□□□ 0.77
TMEM220-202ENST00000455996 COL24A1Q17RW2 1714 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms