RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 SOGA3Q5TF21 947 aa22.79■■□□□ 1.24
COPS7A-202ENST00000455113 C21orf2O43822 256 aa22.78■■□□□ 1.24
COPS7A-202ENST00000455113 RPGRQ92834 1020 aaKnown RBP22.78■■□□□ 1.24
COPS7A-202ENST00000455113 ZNF219Q9P2Y4 722 aaPredicted RBP22.78■■□□□ 1.24
COPS7A-202ENST00000455113 CACNA1SQ13698 1873 aa22.77■■□□□ 1.24
COPS7A-202ENST00000455113 PRPF40BQ6NWY9 871 aaKnown RBP22.77■■□□□ 1.24
COPS7A-202ENST00000455113 NLRP3Q96P20 1036 aa22.77■■□□□ 1.24
COPS7A-202ENST00000455113 PHAXQ9H814 394 aaKnown RBP22.77■■□□□ 1.24
COPS7A-202ENST00000455113 TRMT112Q9UI30 125 aaKnown RBP22.77■■□□□ 1.24
COPS7A-202ENST00000455113 NLRP10Q86W26 655 aa22.77■■□□□ 1.23
COPS7A-202ENST00000455113 ABCC12Q96J65 1359 aa22.76■■□□□ 1.23
COPS7A-202ENST00000455113 C9orf131Q5VYM1 1079 aa22.76■■□□□ 1.23
COPS7A-202ENST00000455113 GPBP1L1Q9HC44 474 aaPredicted RBP22.76■■□□□ 1.23
COPS7A-202ENST00000455113 ZNF521Q96K83 1311 aa22.75■■□□□ 1.23
COPS7A-202ENST00000455113 RNF181Q9P0P0 153 aa22.75■■□□□ 1.23
COPS7A-202ENST00000455113 RIC1Q4ADV7 1423 aa22.75■■□□□ 1.23
COPS7A-202ENST00000455113 ADCY9O60503 1353 aa22.74■■□□□ 1.23
COPS7A-202ENST00000455113 SH3TC1Q8TE82 1336 aa22.74■■□□□ 1.23
COPS7A-202ENST00000455113 CRY2Q49AN0 593 aa22.74■■□□□ 1.23
COPS7A-202ENST00000455113 RBM17Q96I25 401 aaKnown RBP22.74■■□□□ 1.23
COPS7A-202ENST00000455113 ARFGEF2Q9Y6D5 1785 aa22.73■■□□□ 1.23
COPS7A-202ENST00000455113 LMNB1P20700 586 aa22.73■■□□□ 1.23
COPS7A-202ENST00000455113 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
COPS7A-202ENST00000455113 ZNF526Q8TF50 670 aaPredicted RBP22.73■■□□□ 1.23
COPS7A-202ENST00000455113 SLX4Q8IY92 1834 aa22.73■■□□□ 1.23
COPS7A-202ENST00000455113 ATP5J2-PTCD1G3V325 749 aa22.72■■□□□ 1.23
COPS7A-202ENST00000455113 SLC4A2P04920 1241 aa22.72■■□□□ 1.23
COPS7A-202ENST00000455113 RASSF7Q02833 373 aa22.72■■□□□ 1.23
COPS7A-202ENST00000455113 TCERG1O14776 1098 aaKnown RBP22.71■■□□□ 1.23
COPS7A-202ENST00000455113 SLC10A5Q5PT55 438 aa22.71■■□□□ 1.23
COPS7A-202ENST00000455113 ISCA1Q9BUE6 129 aa22.71■■□□□ 1.23
COPS7A-202ENST00000455113 TNRC6CQ9HCJ0 1690 aaKnown RBP22.71■■□□□ 1.23
COPS7A-202ENST00000455113 SBF1O95248 1867 aa22.71■■□□□ 1.23
COPS7A-202ENST00000455113 CCDC93Q567U6 631 aa22.71■■□□□ 1.23
COPS7A-202ENST00000455113 TMX4Q9H1E5 349 aaPredicted RBP22.71■■□□□ 1.23
COPS7A-202ENST00000455113 TAOK3Q9H2K8 898 aa22.71■■□□□ 1.23
COPS7A-202ENST00000455113 MYD88Q99836 296 aa22.7■■□□□ 1.22
COPS7A-202ENST00000455113 SPINK5Q9NQ38 1064 aaPredicted RBP22.7■■□□□ 1.22
COPS7A-202ENST00000455113 VAMP4O75379 141 aa22.69■■□□□ 1.22
COPS7A-202ENST00000455113 NEXNQ0ZGT2 675 aa22.69■■□□□ 1.22
COPS7A-202ENST00000455113 TRIM28Q13263 835 aaKnown RBP22.69■■□□□ 1.22
COPS7A-202ENST00000455113 CACNA1FO60840 1977 aa22.69■■□□□ 1.22
COPS7A-202ENST00000455113 HSP90B1P14625 803 aaKnown RBP22.68■■□□□ 1.22
COPS7A-202ENST00000455113 HOXA10P31260 410 aaPredicted RBP22.68■■□□□ 1.22
COPS7A-202ENST00000455113 KSR2Q6VAB6 950 aa22.68■■□□□ 1.22
COPS7A-202ENST00000455113 MAP3K2Q9Y2U5 619 aa22.68■■□□□ 1.22
COPS7A-202ENST00000455113 NFKBIEO00221 500 aa22.68■■□□□ 1.22
COPS7A-202ENST00000455113 HCLS1P14317 486 aaPredicted RBP22.68■■□□□ 1.22
COPS7A-202ENST00000455113 RTKN2Q8IZC4 609 aa22.68■■□□□ 1.22
COPS7A-202ENST00000455113 CRAMP1Q96RY5 1269 aa22.68■■□□□ 1.22
COPS7A-202ENST00000455113 METTL22Q9BUU2 404 aaPredicted RBP22.68■■□□□ 1.22
COPS7A-202ENST00000455113 PI4KAP2A4QPH2 592 aa22.67■■□□□ 1.22
COPS7A-202ENST00000455113 PI4KAP1Q8N8J0 262 aa22.67■■□□□ 1.22
COPS7A-202ENST00000455113 CCDC191Q8NCU4 936 aa22.67■■□□□ 1.22
COPS7A-202ENST00000455113 ZNF428Q96B54 188 aa22.67■■□□□ 1.22
COPS7A-202ENST00000455113 FAM89AQ96GI7 184 aa22.67■■□□□ 1.22
COPS7A-202ENST00000455113 CDCA7LQ96GN5 454 aa22.67■■□□□ 1.22
COPS7A-202ENST00000455113 FER1L6Q2WGJ9 1857 aa22.67■■□□□ 1.22
COPS7A-202ENST00000455113 CCDC88AQ3V6T2 1871 aa22.67■■□□□ 1.22
COPS7A-202ENST00000455113 ZC3H4Q9UPT8 1303 aaKnown RBP22.67■■□□□ 1.22
COPS7A-202ENST00000455113 E9PSI1 815 aa22.66■■□□□ 1.22
COPS7A-202ENST00000455113 LTBP3Q9NS15 1303 aa22.66■■□□□ 1.22
COPS7A-202ENST00000455113 FLIIQ13045 1269 aa22.65■■□□□ 1.22
COPS7A-202ENST00000455113 FKBP5Q13451 457 aaPredicted RBP22.65■■□□□ 1.22
COPS7A-202ENST00000455113 CC2D2BQ6DHV5 1058 aa22.65■■□□□ 1.22
COPS7A-202ENST00000455113 DDX46Q7L014 1031 aaKnown RBP22.65■■□□□ 1.22
COPS7A-202ENST00000455113 C7orf43Q8WVR3 580 aa22.65■■□□□ 1.22
COPS7A-202ENST00000455113 CWC25Q9NXE8 425 aaPredicted RBP22.65■■□□□ 1.22
COPS7A-202ENST00000455113 RTL5Q5HYW3 569 aaPredicted RBP22.65■■□□□ 1.22
COPS7A-202ENST00000455113 SYNE4Q8N205 404 aa22.65■■□□□ 1.22
COPS7A-202ENST00000455113 ZBTB38Q8NAP3 1195 aaPredicted RBP22.65■■□□□ 1.22
COPS7A-202ENST00000455113 KDM2BQ8NHM5 1336 aa22.65■■□□□ 1.22
COPS7A-202ENST00000455113 GRIPAP1Q4V328 841 aa22.64■■□□□ 1.21
COPS7A-202ENST00000455113 PPEF1O14829 653 aaPredicted RBP22.63■■□□□ 1.21
COPS7A-202ENST00000455113 C3orf67Q6ZVT6 689 aa22.63■■□□□ 1.21
COPS7A-202ENST00000455113 IRS4O14654 1257 aaPredicted RBP22.62■■□□□ 1.21
COPS7A-202ENST00000455113 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
COPS7A-202ENST00000455113 FKBP4Q02790 459 aaKnown RBP eCLIP22.62■■□□□ 1.21
COPS7A-202ENST00000455113 G2E3Q7L622 706 aa22.62■■□□□ 1.21
COPS7A-202ENST00000455113 SLFN5Q08AF3 891 aa22.62■■□□□ 1.21
COPS7A-202ENST00000455113 DPY19L2Q6NUT2 758 aa22.62■■□□□ 1.21
COPS7A-202ENST00000455113 BBOX1O75936 387 aa22.61■■□□□ 1.21
COPS7A-202ENST00000455113 ABCC4O15439 1325 aa22.6■■□□□ 1.21
COPS7A-202ENST00000455113 PCCAP05165 728 aaPredicted RBP22.6■■□□□ 1.21
COPS7A-202ENST00000455113 LAMB2P55268 1798 aa22.6■■□□□ 1.21
COPS7A-202ENST00000455113 OLFM4Q6UX06 510 aa22.6■■□□□ 1.21
COPS7A-202ENST00000455113 DICER1Q9UPY3 1922 aaKnown RBP22.59■■□□□ 1.21
COPS7A-202ENST00000455113 PRELPP51888 382 aa22.59■■□□□ 1.21
COPS7A-202ENST00000455113 GRAPQ13588 217 aa22.59■■□□□ 1.21
COPS7A-202ENST00000455113 GRAPLQ8TC17 118 aaPredicted RBP22.59■■□□□ 1.21
COPS7A-202ENST00000455113 DNAAF4Q8WXU2 420 aa22.59■■□□□ 1.21
COPS7A-202ENST00000455113 TIAM2Q8IVF5 1701 aa22.58■■□□□ 1.21
COPS7A-202ENST00000455113 DDX60Q8IY21 1712 aaKnown RBP22.58■■□□□ 1.21
COPS7A-202ENST00000455113 SF3B3Q15393 1217 aaKnown RBP22.58■■□□□ 1.21
COPS7A-202ENST00000455113 PSMD1Q99460 953 aa22.58■■□□□ 1.21
COPS7A-202ENST00000455113 C1QTNF8P60827 252 aa22.57■■□□□ 1.2
COPS7A-202ENST00000455113 TMC4Q7Z404 712 aa22.57■■□□□ 1.2
COPS7A-202ENST00000455113 TRMT2AQ8IZ69 625 aaKnown RBP22.57■■□□□ 1.2
COPS7A-202ENST00000455113 ATP6V0A2Q9Y487 856 aa22.57■■□□□ 1.2
COPS7A-202ENST00000455113 GLTPD2A6NH11 291 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms